ID FJ531814; SV 1; linear; genomic RNA; STD; VRL; 3333 BP. XX AC FJ531814; XX DT 03-JUN-2009 (Rel. 101, Created) DT 03-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Grapevine fanleaf virus isolate YMC1 polyprotein gene, complete cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3333 RA Jawhar J., Minafra A., Boscia D., Martelli G.P.; RT "Molecular differentiation of grapevine fanleaf virus isolates causing RT yellow mosaic and infectious malformation"; RL Unpublished. XX RN [2] RP 1-3333 RA Jawhar J., Minafra A., Boscia D., Martelli G.P.; RT ; RL Submitted (09-DEC-2008) to the INSDC. RL DPPMA, University of Bari, Amendola, Bari, Bari 70126, Italy XX DR MD5; f960fc9c480b1adee185205e18a3ccac. XX FH Key Location/Qualifiers FH FT source 1..3333 FT /organism="Grapevine fanleaf virus" FT /segment="RNA2" FT /host="Vitis vinifera cv. italia" FT /isolate="YMC1" FT /mol_type="genomic RNA" FT /country="Italy:Puglia" FT /collection_date="2008" FT /note="causes yellow mosaic" FT /db_xref="taxon:12274" FT CDS 1..3333 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:C5HUT4" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR021081" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C5HUT4" FT /protein_id="ACR48170.1" FT /translation="MGKFYYSSRRLACWAAGKNPHLGGSVEQWLAAIETDPSFRQTVKE FT DVQLNRERLDAIRMFSWKVGFGPIEKPEKCDWHYVLTAEKPAQPTGPAKAQEVVVPPVR FT VIPSPPPMPRPYFRPIGAFAPTRSGFIRATVERLSREREESRAAALFAELPLEFPQGAP FT LKLSLAMKFAMLKHTTWRKWYDTSDERLYEAHPGGPCLSPPPPIQSPPSFYERVREFGR FT MKSCAKAFALETFLALNKAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVSTSA FT APGRAQWIFGGRRMLCKKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHICAPIFYSIFLWVVNKWDGTPLGWNET FT FNYPGVYVEGKGSFKIKIRNQKNQIPNKSFVGQNQEDLSLSNFFQIARAIVTSEGTALL FT PILVQIDETLRPDLPLPSFEDDYFVRVDFFEIPPYKEKIEIGPCFFDFTSNTCKVSVGE FT TPFPSINARHGLHNGVPELKTQWSLNPLFGKSSGSVTTTKLVGIKATALDGFPPVFAMQ FT KLEGTLNLLVGNLAGAKLNTQFSLYSRWIAIKLDQALAFSAPRELGEPGTGFGFYGRTS FT VPV" FT mat_peptide 1..765 FT /product="home protein" FT /note="2A" FT mat_peptide 766..915 FT /product="movement protein" FT /note="2B" FT gap 907..2529 FT /estimated_length=1623 FT mat_peptide 2530..3330 FT /product="coat protein" FT /note="2C" XX SQ Sequence 3333 BP; 418 A; 418 C; 436 G; 438 T; 1623 other; atgggcaagt tttattactc cagcaggcgt cttgcctgct gggctgctgg taagaacccc 60 catcttgggg gttctgttga acaatggctg gcggccattg aaactgatcc ctccttccgc 120 caaactgtta aggaggatgt ccagttgaac cgggagcgcc tagacgctat ccgaatgttt 180 tcctggaaag tgggattcgg gcccattgaa aaaccggaaa aatgtgactg gcattacgtc 240 cttacggccg aaaagccagc acagccgacc gggccggcca aagcccaaga ggtggtggtg 300 ccacctgtga gggttattcc ttcaccgccc cccatgccaa ggccttattt taggccaatt 360 ggggcttttg caccaaccag gtccgggttt attcgggcca ctgtggaaag actctcccgt 420 gaaagggaag agtcgagagc tgcggcactc tttgccgaac tgccattgga gtttccccaa 480 ggggctcctt tgaagttgag cttggcgatg aaatttgcca tgctcaagca taccacttgg 540 aggaagtggt atgacaccag tgatgagcgt ctctatgagg ctcatcctgg tggtccttgt 600 ctttctcctc ctcccccaat ccaaagccct ccctccttct atgagagggt tagggagttt 660 ggcaggatga agtcctgcgc caaggctttt gccttggaga ctttcctggc cctcaacaag 720 gcctgggtgg gtttggtgga catccccagc acttctgtgt gctgtgcgga tgggagaact 780 accggggggc aaacaattgc tcaagaggct gatcctttgc aacatagggt cagcacatct 840 gcagcccccg gtagggctca atggatattc ggggggcgtc gtatgctctg caagaaagag 900 gaagcannnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 960 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1020 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1080 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1140 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1200 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1260 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1320 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1380 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1440 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1500 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1560 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1620 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1680 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1740 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1800 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1860 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1920 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 1980 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2040 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2100 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2160 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2220 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2280 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2340 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2400 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2460 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 2520 nnnnnnnnnc acatttgtgc gccaatattc tatagtattt ttttatgggt tgttaataag 2580 tgggacggga cccccttggg ttggaatgaa acctttaatt accccggggt gtatgtggaa 2640 ggaaagggaa gttttaaaat caaaattcga aatcaaaaaa accaaatacc taataaatca 2700 tttgtcggac aaaatcaaga ggacctgagc ctctcaaatt ttttccaaat agcgagggcc 2760 atagtcactt cggaaggaac cgccctactc ccaattcttg ttcaaattga cgagaccctt 2820 cgccccgacc tccctcttcc aagttttgaa gatgattatt tcgtaagggt ggattttttt 2880 gaaatccccc cttacaaaga aaaaattgag attggtcctt gtttctttga cttcacttca 2940 aacacttgta aagtgtctgt aggcgaaacc ccatttccct caataaatgc ccgtcacgga 3000 ttgcataatg gtgtccccga actcaaaacc caatggagtc tgaacccttt atttggcaag 3060 agcagtggga gcgtgaccac cacgaagctg gttggcatta aggccaccgc tttggatggt 3120 tttcccccgg tttttgccat gcagaaacta gagggaactc taaacttgtt ggttgggaac 3180 ttggcaggag ccaaactcaa cactcaattc tccctttata gccgatggat cgcaataaaa 3240 ctggatcaag ctttggcttt ttcagcaccc cgagagctgg gggaacctgg aacaggtttt 3300 ggtttttatg gaagaaccag tgtcccagtc tag 3333 //