ID   FJ531812; SV 1; linear; genomic RNA; STD; VRL; 2088 BP.
XX
AC   FJ531812;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Grapevine fanleaf virus isolate YM30H polyprotein gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-2088
RA   Jawhar J., Minafra A., Boscia D., Martelli G.P.;
RT   "Molecular differentiation of grapevine fanleaf virus isolates causing
RT   yellow mosaic and infectious malformation";
RL   Unpublished.
XX
RN   [2]
RP   1-2088
RA   Jawhar J., Minafra A., Boscia D., Martelli G.P.;
RT   ;
RL   Submitted (06-DEC-2008) to the INSDC.
RL   DPPMA, University of Bari, Amendola, Bari, Bari 70126, Italy
XX
DR   MD5; 1c6b385484d0af1485fed7c852fd487e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2088
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Nicotiana occidentalis"
FT                   /isolate="YM30H"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy:Puglia"
FT                   /collection_date="2008"
FT                   /note="causes yellow mosaic"
FT                   /db_xref="taxon:12274"
FT   CDS             1..>2088
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C5HUT2"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR021081"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUT2"
FT                   /protein_id="ACR48168.1"
FT                   /translation="MGKFYYSSRRLACWAAGKNPHLGGSVEQWLAAIETDPSFRQTVKE
FT                   DVQLNRERLDAIRMFSWKLGYGPIDNPEKCNWHFVLTGEVSAQPTQPVKADEVVGVPQP
FT                   KKVVIPSPPPPPAPYFRAVGAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQ
FT                   GAPLKLSLAMKFAMLKHTTWRKWYDTSDERLLEAHPGGPCLPPPPPIQSPPSFYERRRE
FT                   FCRVKSCARAFALETSLGLNRAWVGLVDIPSTSVCCADGRTTGGQTIAQEADLLQHTVS
FT                   TSVAPGRAQWSSERRQLLRRKEPANSLQVFACLTDETXXXXXXXXXXXXXXXXXXXXXX
FT                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEYRDRGMSA
FT                   VVVDAPEIDVNPFGMSGDSTDLTVVATYGHERDMARAFIGSASTILGNGLARAIFFPGL
FT                   QYSQKEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQV
FT                   RGTTLRATMVGNTVVVSPEGSLVTGTPEARVEMGGGSSIRMVGPLQWESVEEPGQTFSI
FT                   RSRSRSVGIDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDMIS
FT                   DFKGVQYERWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPGYP
FT                   LS"
FT   mat_peptide     1..774
FT                   /product="home protein"
FT                   /note="2A"
FT   mat_peptide     775..1818
FT                   /product="movement protein"
FT                   /note="2B"
FT   gap             955..1164
FT                   /estimated_length=210
FT   mat_peptide     1819..>2088
FT                   /product="coat protein"
FT                   /note="2C"
XX
SQ   Sequence 2088 BP; 433 A; 446 C; 536 G; 463 T; 210 other;
     atgggcaagt tttattactc cagcaggcgt cttgcctgct gggctgctgg taagaacccc        60
     catcttgggg gttctgttga acaatggctg gcggccattg aaactgatcc ctccttccgc       120
     caaactgtta aggaggatgt ccagttgaac cgggagcgcc tagacgctat ccgaatgttt       180
     tcctggaaat tgggatacgg gcccattgac aacccggaaa aatgcaactg gcatttcgtc       240
     ctaacgggcg aggtgtcagc gcagccgacc cagccggtta aagctgatga ggttgttggg       300
     gtgccacaac cgaagaaggt ggtgatacca tcaccacctc ctcccccagc tccctatttt       360
     agggctgttg gggcttttgc accaacccgg tccgggttta ttcgggccac tgtggaaaga       420
     ctcacccggg aacgggaaga gtcgagagct gcggcactct ttgccgaatt accattggag       480
     tatcctcagg gtgctcctct gaagttgagc ctggcgatga agttcgccat gctcaaacat       540
     accacttgga ggaagtggta tgacaccagt gatgaacgcc tcttggaggc tcatcctggt       600
     ggtccttgtc ttcctccccc tcccccaatc caaagccctc cctcttttta cgagaggaga       660
     agggaatttt gcagggtgaa gtcctgcgcc agggcttttg ccctggaaac ctccctgggc       720
     ctcaataggg cttgggtagg tttggtggat atccccagca cttctgtgtg ctgtgcggat       780
     ggaaggacta ccggtgggca aacgattgct caagaagctg atctcttgca acatacggtc       840
     agcacatcag tagcccccgg tagggcacaa tggtcctccg agcgcagaca gcttctgcga       900
     aggaaagagc cagcaaatag cttgcaagtc tttgcttgtc taacagacga aactnnnnnn       960
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1080
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnatggaa gagtaccggg acagaggcat gtcggctgtg      1200
     gtggttgatg cgccagaaat agatgtaaac ccgtttggca tgagcgggga ttcaacggac      1260
     ttgactgtcg tggcaacgta tgggcatgaa cgtgatatgg cacgtgcctt tattggttct      1320
     gcttctacaa ttctaggaaa tgggttagct agagccattt tctttcctgg tttgcaatat      1380
     agtcagaagg aaccaaggcg cgaatctata atccgcctat atgttgcctc aaccaatgcc      1440
     actgtggaca ctgattcagt cttggcggcc attagtgttg gtaccttgcg tcaacatgtt      1500
     ggctccatgc actatcgaac tgtggctagt accgtgcacc aggcccaggt gcgagggaca      1560
     acacttaggg ccactatggt gggtaatact gtcgtggtgt cgcctgaagg aagcctggtt      1620
     actgggaccc ctgaagcaag agttgaaatg gggggcgggt ctagtatcag gatggtggga      1680
     cctctacaat gggaaagtgt ggaggaaccg gggcaaacct tctctatcag gagtcgctca      1740
     cggtctgtgg ggattgacag gaatgttgat cttcctcaac ttgaggctga gcccagattg      1800
     agctcaaccg tgagaggatt agctggtagg ggagtgattt atattcccaa ggattgccag      1860
     gcaaataggt acttgggcac cctgaacata cgtgacatga tttcagattt taagggtgtc      1920
     cagtatgaaa ggtggataac tgcaggattg gtcatgccta ctttcaagat agttattagg      1980
     ctgcctgcta atgccttcac tgggttgaca tgggtgatga gctttgatgc ctacaaccgg      2040
     ataactagta ggattactgc tagtgcagat cctggatacc ccttgtca                   2088
//