ID   FJ531811; SV 1; linear; genomic RNA; STD; VRL; 2088 BP.
XX
AC   FJ531811;
XX
DT   03-JUN-2009 (Rel. 101, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Grapevine fanleaf virus isolate MF20 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Grapevine fanleaf virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-2088
RA   Jawhar J., Minafra A., Boscia D., Martelli G.P.;
RT   "Molecular differentiation of grapevine fanleaf virus isolates causing
RT   yellow mosaic and infectious malformation";
RL   Unpublished.
XX
RN   [2]
RP   1-2088
RA   Jawhar J., Minafra A., Boscia D., Martelli G.P.;
RT   ;
RL   Submitted (06-DEC-2008) to the INSDC.
RL   DPPMA, University of Bari, Amendola, Bari, Bari 70126, Italy
XX
DR   MD5; 2fa9d5b2a8bb8269e1376b33721747b5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2088
FT                   /organism="Grapevine fanleaf virus"
FT                   /segment="RNA2"
FT                   /host="Vitis vinifera cv. uva di Troia"
FT                   /isolate="MF20"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy:Puglia"
FT                   /collection_date="2008"
FT                   /note="causes infectious malformation"
FT                   /db_xref="taxon:12274"
FT   CDS             1..>2088
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C5HUT1"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR021081"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:C5HUT1"
FT                   /protein_id="ACR48167.1"
FT                   /translation="MGKFYYSSRRLACWAAGKNPHLGGSVEQWLAAIETDPSFRQTVKE
FT                   DVQLNRERLDAIRMFSWKVGFGPIDNPEKCDWHFVLTGERPAQPTRPVKADEVVVVPQP
FT                   KKAVIPPPPSPPAPYFRAVGAFAPTRSGFIRATVERLSREREESRAAALFAELPLEYPQ
FT                   GSPLKLSLAMKFAMLKHTTWRKWYDTSDERLLEAHPGGPCLPPPPPIQSPPSFYERVRE
FT                   FCRKKSCARAFALETALGLNKAWVGLVNIPSTSVCCADGRTTGGQTIAQEADPLQHRVS
FT                   TSVAPGRAQWISERRRALRRKEQANSLQGLAAQTDMTFXXXXXXXXXXXXXXXXXXXXX
FT                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEYRDRGMSA
FT                   VVMDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGL
FT                   QYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVANTVHQAQV
FT                   QGTTLRATMMGNTVVVSPEGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSI
FT                   RSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMIS
FT                   DFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPVYT
FT                   LS"
FT   mat_peptide     1..774
FT                   /product="home protein"
FT                   /note="2A"
FT   mat_peptide     775..1818
FT                   /product="movement protein"
FT                   /note="2B"
FT   gap             958..1164
FT                   /estimated_length=207
FT   mat_peptide     1819..>2088
FT                   /product="coat protein"
FT                   /note="2C"
XX
SQ   Sequence 2088 BP; 451 A; 450 C; 519 G; 461 T; 207 other;
     atgggcaagt tttattactc cagcaggcgt cttgcctgct gggctgctgg taagaacccc        60
     catcttgggg gttctgttga acaatggctg gcggccattg aaactgatcc ctccttccgc       120
     caaactgtta aggaggatgt ccagttgaac cgggagcgcc tagacgctat ccgaatgttt       180
     tcctggaaag tgggattcgg gcccatagat aaccccgaaa aatgtgactg gcatttcgtc       240
     ctaacgggcg agaggccagc acagccgacc cggccggtta aagccgatga ggttgtggtg       300
     gtgccacaac cgaagaaggc ggtgatacca ccaccgcctt ctcccccagc tccctacttt       360
     agggctgttg gggcttttgc accaactcgg tccgggttta ttcgggccac tgtggaaaga       420
     ctctcccggg aacgggaaga gtcgagagct gcggcactct ttgccgaact gccattggag       480
     tacccacagg gttctccctt gaagttgagc ttggcgatga agtttgccat gctcaagcat       540
     accacttgga ggaagtggta tgacaccagt gatgaacgcc tcttggaggc tcatcctggt       600
     ggtccctgcc ttcctcctcc tcccccaatc caaagccctc cctcttttta tgagagggta       660
     agggagttct gcaggaagaa gtcctgcgcc agggcttttg ccctggaaac cgccctgggt       720
     cttaataagg cctgggtggg tttagtgaat atccccagca cttctgtgtg ctgtgcggat       780
     ggcagaacta ccggtgggca aacaattgct caagaagctg atcctttgca acatagggtc       840
     agcacatccg tagcccccgg tagggcacaa tggatctctg agcgcagacg ggctctgcgg       900
     aggaaagagc aagcaaatag cctgcagggt cttgctgctc aaactgacat gacttttnnn       960
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1080
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnatggaa gagtaccggg acaggggcat gtcagctgtg      1200
     gtgatggatg cgctagaaat agccataaac ccatttggca tgcctggaaa tccaacggac      1260
     ttgactgtcg tggcgacata tgggcatgaa cgggatatga cacgtgcctt tattggatct      1320
     gcttctacat tcctagggaa tggattagct agagccattt tctttcctgg tttgcaatat      1380
     agccaggaag aaccgaggcg tgaatctata attcgcctat atgttgcttc cactaatgcc      1440
     actgtagaca ctgattcagt cttggcagcc atcagtgttg gcactttgcg tcaacacgtt      1500
     ggttccatgc attatcgaac agtggccaat actgtacacc aggcccaggt acagggaacg      1560
     acactcaggg ctactatgat gggtaacact gtcgtagtgt cacctgaagg aagcctggtt      1620
     actgggaccc ctgaagcaag agttgaaata gggggtggtt ccagtattag gatggtagga      1680
     cctctgcagt gggaaagtgt agaggaacca gggcaaacct tctctatcag aagccgctca      1740
     cggtctgtga ggattgatag aaatgttgat cttcctcaac ttgaggctga gcccagactg      1800
     agctcaaccg tgaggggatt agctggtaga ggagtagtgt acattcccaa ggattgccag      1860
     gcaaacagat acttgggcac cctgaacata cgtgatatga tctcagattt taagggtgtt      1920
     cagtatgaga agtggataac tgcaggatta gtcatgccta cttttaaaat agttattagg      1980
     ctgcctgcaa atgcctttac tggtctgaca tgggtgatga gctttgatgc ttataaccgg      2040
     ataactagta gaatcactgc tagtgctgat cctgtataca ccctgtca                   2088
//