ID FJ473383; SV 1; linear; genomic RNA; STD; VRL; 5868 BP. XX AC FJ473383; XX DT 02-NOV-2009 (Rel. 102, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 1) XX DE Fig leaf mottle-associated virus 2 isolate F3 p55 gene, partial cds; p6, DE p60, p56, and p22 genes, complete cds; and p39 gene, partial cds. XX KW . XX OS Fig leaf mottle-associated virus 2 OC Viruses; Riboviria; Closteroviridae; Ampelovirus; unclassified Ampelovirus. XX RN [1] RP 1-5868 RA Elbeaino T., Heinoun K., Digiaro M., Martelli G.P.; RT "Partial nucleotide sequence, genome organization and taxonomy of Fig leaf RT mottle-associated virus 2"; RL Unpublished. XX RN [2] RP 1-5868 RA Elbeaino T.; RT ; RL Submitted (19-NOV-2008) to the INSDC. RL IPM, Istituto Agronomico Mediterraneo di Bari, Via Ceglie 9, Valenzano, Ba RL 70010, Italy XX DR MD5; e0c3a8d0cef3ca3d9e5f4766390dcd16. XX FH Key Location/Qualifiers FH FT source 1..5868 FT /organism="Fig leaf mottle-associated virus 2" FT /host="Ficus carica" FT /isolate="F3" FT /mol_type="genomic RNA" FT /country="Italy" FT /collection_date="05-Feb-2008" FT /db_xref="taxon:394187" FT CDS <1..831 FT /codon_start=1 FT /product="p55" FT /note="putative coat protein duplicate; CPd" FT /db_xref="GOA:D0QET4" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:D0QET4" FT /protein_id="ACS75345.1" FT /translation="MSQSSQSQTVMPPMGASLGSSFGQPVSPPRMSNTPLGAVSSSTIP FT SVVSASYGSAANPTVPISIKDILHLNQCKFYQYKIDEQDFPKDSSIEVPGLMEKDVFVI FT CSESLIKHFQNLYSTKDKLVMNMAMVCLLQMALMYTTSLGAKDYTNEGLVVSGTFTVKF FT TYAEIWKLLFSLVDTKKYPNVMRVFLRHFSSLTTSLLVEGVLKPNFKLMAKYGIPNEFY FT PYCYDFSMVNTIEHGIDAVVANVLSRLIAIRGKSSSKATVHNVLEIVDRVTAII" FT CDS 831..998 FT /codon_start=1 FT /product="p6" FT /note="hydrophobic protein" FT /db_xref="GOA:D0QET5" FT /db_xref="UniProtKB/TrEMBL:D0QET5" FT /protein_id="ACS75346.1" FT /translation="MSDLFTCSVFSYFLAVGISLLILTIIVIIAVLVKVNFFPTTPVSL FT PTHSSRLPYQ" FT CDS 995..2626 FT /codon_start=1 FT /product="p60" FT /note="heat shock protein 70-like" FT /db_xref="GOA:D0QET6" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="InterPro:IPR029047" FT /db_xref="UniProtKB/TrEMBL:D0QET6" FT /protein_id="ACS75347.1" FT /translation="MTSNKVNLGLDFGTTYSTGVVSVADGKVETVKILNNDLLPTVIYL FT RPDNTYQIAQAANSAYQFDLEKNQCNGWLYVDIKRWVGVNKYNFEKVCEKLKGREYEVE FT LVEDYQVAIGGIGTLPSPKLKILSLIAMFVKALVYEIDEQYGLIVENMVCTVPADYNSY FT KRTFISLASQEVGVNTAGVVNEPTAAALFSSMSSKSTPTRSILVYDFGGGTFDVSLLVL FT FGKAAVVLDSAGDLFLGGRDIDMSVAKVLARELGDESKYKQLVSQSAAIKIDICEKSAE FT EHNVIFDNSLRTVKFSYNDLCVVAAPYIQRTIVILDEIIARNNLDLSGVEVVLVGGSSA FT LPLVRDMVSQTKGVIRVLSDKSTQRIAVAAGAKLVADSVIENKGLVLVDCLSHALVDEV FT EGFSSMVVIGKGQPVPIETSINYTYGTGTMTIPVYEGEEIITFLNEPTYYSEIDLVNKN FT KVKLTYKVASDGQLTIKVDDVIVENKFLPKQSGRVSQYKYVNPLTEFKELGIKQYVNDL FT LDINSKTATRTTLTIEELSDLAEHFN" FT CDS 2635..4113 FT /codon_start=1 FT /product="p56" FT /note="heat shock protein 90-like" FT /db_xref="InterPro:IPR004909" FT /db_xref="UniProtKB/TrEMBL:D0QET7" FT /protein_id="ACS75348.1" FT /translation="MTQMITITNSVELERFLQCMFCKQDVTNEVTSMLGYYETLHDSAK FT AIKYYESSLCVASLEPRTKNTANLVGGFRWYEVIAYDFLLIHGKARQFQGTRIAFLYHC FT SKVVDANYKNLITRGFKNYSDYRPSLNNVDSSVVETHASTVAKGDKILSKLVVSCCYSS FT GRLISLTDIERAIDLTTKIPAKKVVSGVTKSPISRKCIKAAELYAEYCVVVGDVSMQGK FT LRVNDTYIKSLKILLFKKYVKPSNFEGVTMVLFNLLEKFKPRILSYDDRVTWMLTVGEN FT AVSELSMLYGRLRVPELQSIINHLPYLPTDTLSFQESRLSALLLMSGVTLNEKEFLLFL FT PRGVFDRILTTLLSVTRLKTHPIMNAKQMLITLILYCIRQRTNKYRIVERQKKFTITFG FT STVYSVDLTDLLQLDEELSKTHKNALRRFVGSFSNLAYQICGKTELTKTHHLEGYVRRT FT KSLNFDFVKYIDTRPLSEKERTYIYKLNQRFSKT" FT CDS 4161..4721 FT /codon_start=1 FT /product="p22" FT /db_xref="UniProtKB/TrEMBL:D0QET8" FT /protein_id="ACS75349.1" FT /translation="MFTLGTSIACDMNKELNIVQSSKSTDVVAASKSKGVAPMKVLLAI FT EAHLMLECYITDYSKLMMPYKPLKVSKTEILSMQTSKEMEDIINELPDVLTLSCGTIPS FT PLEQLVKEHLLELKRKYEIYDYMYVGKLSPTKFEYGLVTRGGRKASIEIQENDFKRIAE FT LIKKLIDITQEDLVERALLMLQI" FT CDS 4807..>5868 FT /codon_start=1 FT /product="p39" FT /note="putative coat protein" FT /db_xref="GOA:D0QET9" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:D0QET9" FT /protein_id="ACS75350.1" FT /translation="MSSAPPPSGTSTPATPPPSAAVVPVTMPTRPDKVYMNRSTGQLEV FT LNMVFISRDHTVVPIDPVEYANSSKEHKDLVREHYICLDFWSLKENFGIDKDAERTIHY FT DPNGNEALVLLKNSTRVPAGMEDLNLPIITQDMLSQVRIQSAYSTYFKDIYNDIHGIKH FT GPQTGIPTQNPFTSQRPPKGSAGVYSIDSLFASDPRKTVFLIPSNVDLEITEAVAPGVF FT SSAKMKRVAPNLNKICADLFGVVDNETIGATMLLVVQMLVMAMTSMSTDASDVEPVSME FT FKGQRYSLDYPTLREALVTPFSGEAEKNPIRRFTRFISRTIINWVSSGKVTPNIKLMAK FT WGVPKKFKGEFHIG" XX SQ Sequence 5868 BP; 1830 A; 981 C; 1329 G; 1728 T; 0 other; atgtcacaga gtagtcaatc tcagacggtg atgcctccga tgggagcgtc cttaggtagt 60 tcttttggac agcctgtttc gcctcctcgg atgtcaaaca caccgttggg agcagtttct 120 tcttctacta ttccgagtgt tgtgagtgca tcgtacggtt ctgctgcaaa ccctactgta 180 ccaataagta ttaaagatat attacatcta aatcaatgta aattctacca gtataagata 240 gacgaacaag attttcctaa agactcctca atagaggtac caggcttaat ggaaaaggac 300 gtgtttgtga tatgttcaga aagtttgatt aaacattttc aaaacttata ttcgacaaag 360 gataaattgg ttatgaacat ggctatggtg tgcttattac aaatggcact gatgtacacc 420 acgagtctag gagccaagga ctacactaac gaagggttgg tggtatctgg gacattcaca 480 gtgaagttca cttatgcgga aatttggaaa ctgctctttt ctctagtgga cactaagaaa 540 tatcctaatg tcatgcgtgt tttccttaga catttctcat ctttgactac ttctttatta 600 gtggaagggg tactaaaacc aaactttaag ttgatggcaa agtatggtat ccccaacgaa 660 ttttatcctt attgctatga tttttcgatg gtaaacacga ttgaacatgg aatagatgca 720 gttgtggcta atgtgctcag tagattaatt gcgattagag gtaaaagtag ttctaaggcc 780 actgtacaca atgtgttgga aatagtagac cgtgtcactg ctattatcta atgtcggatt 840 tgttcacttg ttctgtgttt tcttatttct tagcggtcgg gataagtctc ttgatcttaa 900 caatcattgt gatcattgca gttttagtta aggtgaattt cttcccaacc acgcctgtgt 960 ccctaccgac tcactctagt aggttgccgt atcaatgacg tccaacaagg ttaatttagg 1020 gttggatttt ggtacgactt attcgactgg ggtggtgtct gttgcggacg gtaaggtgga 1080 aactgtaaaa attttaaaca atgatctttt acccacggtt atttacttgc gacccgataa 1140 tacttatcag atagcacaag ctgcgaacag tgcctatcag tttgatttgg agaaaaatca 1200 atgcaacgga tggttgtatg ttgatattaa aagatgggta ggcgtaaaca aatacaactt 1260 tgaaaaggtt tgtgaaaagc tgaagggacg ggaatatgaa gtggaactag ttgaagatta 1320 tcaagtcgca atagggggaa taggcacttt accttctcct aaattaaaga ttttaagttt 1380 gatagctatg tttgtcaaag ctcttgtcta tgagattgac gagcagtatg ggttgatagt 1440 tgagaatatg gtttgcaccg ttccagctga ctacaattct tacaagagga cgttcatttc 1500 tctagcttcg caggaggtgg gagtaaacac tgctggtgta gtcaacgaac caaccgcggc 1560 ggctttgttt tcctcgatgt cgagtaaatc cactccgact aggtctattc tcgtttacga 1620 ctttggtggg ggtactttcg atgtgtcttt attggttttg tttggtaaag ctgcggttgt 1680 gttagactcg gcaggtgatc tctttttggg aggtagagac atagatatgt cggtggcaaa 1740 ggttttggct cgcgaattag gagatgaaag caaatataaa cagttagtct ctcagtccgc 1800 tgcgataaaa attgacattt gcgaaaaatc tgcggaagaa cacaacgtga tcttcgataa 1860 ctctcttaga acagtaaagt tttcgtataa tgatttgtgt gtggtcgcag ctccttatat 1920 acaacgaact atagtaatat tagatgaaat aatagcgaga aacaatctag atttaagtgg 1980 cgttgaggta gtgctagtcg gaggtagttc cgctttgcca cttgttaggg acatggtgtc 2040 tcagacaaaa ggggtgataa gagttttgag tgacaagtcg actcaaagga tcgctgtagc 2100 ggcaggtgca aaactagtgg ctgatagcgt aatagaaaat aaaggcttag ttcttgtcga 2160 ttgtctgtcg cacgcgttgg ttgacgaggt cgagggattt tcatccatgg tggttatcgg 2220 caaaggtcaa cctgttccta ttgagacgag catcaattac acgtatggga cgggtacgat 2280 gactataccg gtttacgaag gcgaggagat aataactttc cttaatgagc ctacttatta 2340 ctcggagata gatttggtga ataaaaataa agtgaagtta acatacaaag tagcaagtga 2400 tggacagtta acgattaaag ttgacgatgt aatagttgaa aataagtttt tgccgaaaca 2460 atcagggaga gtttctcaat ataaatatgt taatcccttg actgagttta aggaactagg 2520 tataaaacaa tacgtgaacg atttattgga cataaactcc aaaactgcaa ctagaaccac 2580 cctcaccata gaagaattga gtgacttggc tgaacacttc aattagtgtt aaggatgaca 2640 caaatgataa caataacaaa cagtgtggaa ctcgagaggt ttttgcagtg tatgttttgt 2700 aagcaagatg tgaccaacga ggtgacttcc atgttaggat attacgaaac tcttcatgat 2760 tctgcaaaag caattaaata ctacgaaagt agtttgtgtg ttgcctcatt agaaccgagg 2820 acgaaaaata cggccaactt agtgggaggt tttagatggt atgaggtgat agcttacgac 2880 tttctattga ttcacggtaa agcacgtcag tttcaaggaa caaggattgc gtttctttat 2940 cattgttcca aggttgtgga tgcgaattac aaaaacctaa tcacaagggg ttttaaaaac 3000 tactcggact acagaccttc attgaacaac gttgattctt cggtcgtcga aacccatgct 3060 tcaactgtag caaagggaga taaaatacta agcaaattgg ttgtgtcttg ctgttatagt 3120 tccggcagac taatttcgtt gacggatatc gaaagggcca tcgatttgac cactaaaata 3180 ccggctaaaa aggtggttag tggtgtcaca aaatctccga taagtcgtaa atgcattaaa 3240 gcagcggagt tatatgctga gtattgcgtg gtcgtgggag acgtcagtat gcaagggaaa 3300 ttacgagtga atgacacata cattaaatca ttaaagattt tattgtttaa gaaatacgtg 3360 aaaccatcaa attttgaggg ggtgactatg gtgttgttta atttgttgga aaaatttaaa 3420 cctcgcattt tatcttacga cgatagagta acgtggatgc taactgtggg tgaaaacgca 3480 gtaagcgagc tttctatgtt gtatggtcgt ttgcgagttc cggagttaca aagcattatc 3540 aatcatctac cttaccttcc tacagatact ctgagttttc aggaatccag attgtcagct 3600 ttgttgttga tgagcggggt aactttaaac gaaaaagaat ttctattatt tttacctcga 3660 ggtgttttcg atagaattct gacaacttta ctatccgtga ctcgattgaa gactcatcca 3720 ataatgaatg caaaacagat gttaatcacc ttaattctat actgtatcag acagcgtacg 3780 aataagtatc gaatagttga aagacaaaag aaatttacga ttacctttgg ttctacagtt 3840 tacagcgtgg acttaacgga tttgttgcag ttggatgagg agttgtctaa gactcacaaa 3900 aatgcactaa ggagatttgt gggtagtttc tcgaatttag cttatcaaat ttgtgggaag 3960 acagagctga caaagacaca ccatctggag ggatatgtac gacgtactaa aagtttaaat 4020 tttgattttg tcaagtacat tgacacgcgc cctttatcgg agaaggaaag aacttatata 4080 tacaaattaa atcaaaggtt ttcgaaaact taattgacaa actatttaag taaattcatt 4140 ttgtgaagat ttcatcaacg atgttcacac ttgggacgag tatagcttgc gatatgaata 4200 aggagttaaa catcgtccaa tcatcaaaat ctacggacgt agttgcagct agtaaatcga 4260 agggtgtcgc acctatgaag gtgcttttgg ctattgaggc acacctcatg cttgagtgtt 4320 atataactga ttacagtaaa ctgatgatgc catataaacc gctgaaagtg tctaaaaccg 4380 aaattttaag tatgcaaact tctaaagaaa tggaggacat tatcaacgag ttgcctgatg 4440 tattaacgtt aagttgtggg actattccaa gtcctttgga acaattagtg aaagaacatt 4500 tactcgaatt aaaacgtaaa tatgagatat atgattacat gtacgtagga aagttatctc 4560 caactaaatt tgaatatggt ttggtgacaa gaggaggaag aaaagcttcc atagaaatac 4620 aagaaaacga ctttaagcga attgcagaat taattaagaa actaattgat attactcaag 4680 aagatttagt cgaaagagcc ttattgatgt tgcaaatttg agccgacagt gtgatagctc 4740 gagttataaa gaggaaagtt ttcgaaataa aataaaatca atttacatta gattaagtga 4800 gtaaagatgt cttcagctcc accaccaagt gggacttcga cgccagcaac tccaccgccg 4860 tcagcggcag tggtgcctgt tacaatgcct acaagaccag acaaggttta tatgaataga 4920 tctacaggtc agttggaggt actaaatatg gtttttatct ctcgagacca tacagtagtt 4980 ccgatagacc cagttgaata tgcaaacagt agtaaagaac acaaagactt agtgagagaa 5040 cattacatat gtctcgactt ttggagttta aaagaaaatt ttggtataga taaagacgcc 5100 gaaaggacca tacactacga tccaaatggt aatgaagcgt tagttttgtt gaaaaactcg 5160 acacgagtac cggcaggtat ggaagattta aatctcccaa taatcaccca agatatgttg 5220 tctcaggtcc gtatacaaag tgcttattcg acgtatttta aggacatcta taatgatatc 5280 catggtataa aacacgggcc tcaaactggt ataccgacgc aaaatccgtt cacgtcccaa 5340 agaccaccta agggttctgc gggtgtgtat tcaatagata gtttatttgc ttcggatcca 5400 agaaaaactg tctttttaat tccaagtaat gtagatttgg agataacgga agcggtagca 5460 cctggcgttt ttagttcagc aaaaatgaaa cgggtagctc caaacttaaa caagatctgt 5520 gccgatcttt ttggtgtagt ggacaatgaa acgatcgggg ctaccatgct gttggtagtg 5580 caaatgttag tcatggctat gacgagtatg agcacagatg cgtcagacgt tgaaccggta 5640 tcaatggagt ttaaaggtca gaggtattca ttggattatc ctactttgag ggaagctttg 5700 gtgacacctt tttctggcga ggctgagaaa aacccgatca gaagattcac taggtttatt 5760 tcgcgaacta taatcaactg ggtgtcatcg gggaaagtaa cgccgaatat caagttgatg 5820 gctaagtggg gagtaccaaa gaagttcaag ggcgaattcc acattggg 5868 //