ID   FJ469629; SV 1; circular; genomic DNA; STD; VRL; 1347 BP.
XX
AC   FJ469629;
XX
DT   29-DEC-2008 (Rel. 98, Created)
DT   25-FEB-2009 (Rel. 99, Last updated, Version 2)
XX
DE   Cotton leaf curl Gezira betasatellite - [okra:Niger] clone NG2-betaFL,
DE   complete sequence.
XX
KW   .
XX
OS   Cotton leaf curl Gezira betasatellite - [okra:Niger]
OC   Viruses; Tolecusatellitidae; Betasatellite.
XX
RN   [1]
RP   1-1347
RX   DOI; 10.1007/s00705-008-0304-6.
RX   PUBMED; 19156351.
RA   Shih S.L., Kumar S., Tsai W.S., Lee L.M., Green S.K.;
RT   "Complete nucleotide sequences of okra isolates of Cotton leaf curl Gezira
RT   virus and their associated DNA-beta from Niger";
RL   Arch. Virol. 154(2):369-372(2009).
XX
RN   [2]
RP   1-1347
RA   Shih S.L., Kumar S., Lee L.M., Green S.K.;
RT   ;
RL   Submitted (17-NOV-2008) to the INSDC.
RL   Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Taiwan,
RL   Republic of China
XX
DR   MD5; ff57a973926133649d4258c012112f50.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1347
FT                   /organism="Cotton leaf curl Gezira betasatellite -
FT                   [okra:Niger]"
FT                   /mol_type="genomic DNA"
FT                   /country="Niger:Sadore (45km from Niamey)"
FT                   /isolation_source="Okra"
FT                   /collection_date="2007"
FT                   /clone="NG2-betaFL"
FT                   /db_xref="taxon:555599"
FT   gene            complement(195..548)
FT                   /gene="betaC1"
FT   CDS             complement(195..548)
FT                   /codon_start=1
FT                   /gene="betaC1"
FT                   /product="betaC1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:B5LEQ2"
FT                   /protein_id="ACK77820.1"
FT                   /translation="MTITFRSTKGVHFRVDVFLKDDHIDCRIEVTATKEAYLRKSTFII
FT                   PYNFADVFIPFDFNGSEEEIMNGLRNMFKDTTHQMIKTEELVELVDMIMAENLNILGME
FT                   LINHYRIINKSSV"
XX
SQ   Sequence 1347 BP; 424 A; 262 C; 248 G; 413 T; 0 other;
     accgtgggcg agcggttctc ggactgaaat tggtgggtcc cagctattgg gaatggatga        60
     aatcttggga aattgggcta gatccaaccc aattgttata tataattaat ttatgattaa       120
     attaatactg cgttaaatga tattataaaa cagataagac ataaaatatt attcattata       180
     tataatttaa aacattacac ggatgattta tttatgatgc ggtaatgatt aatgagttcc       240
     atgcctaaaa tgttcaggtt ctcagccatt atcatatcca ccagttcgac taactcctcc       300
     gtcttgatca tctggtgagt ggtgtccttg aacatattcc ttaacccatt cattatttcc       360
     tcctcagagc cgttaaagtc gaatgggatg aagacatcag cgaagttgta tggtatgata       420
     aacgttgatt tcctcagata tgcctccttt gttgccgtca cctctatcct gcagtctata       480
     tgatcgtctt tgaggaagac atcgactctg aagtggactc ccttggtgct ccggaatgtg       540
     atagtcattt tttattatgt ttcgtgttga tcatcaacag gaaatatata gatgattcat       600
     agaaaatatc ttatgagtat atggatttaa atggaacacg tatatcttgt attatccata       660
     catatttcgt catccattac gtcatacagt ctcatacgat gtaaagcatc gtaagagata       720
     aaaaataaag agaagaaaaa tcaataaaca agaaataatt ataatttaga aaaaaacaag       780
     gcagcgcagc gaaaaaaaaa ccccgaacag acaaataaaa ttaaatagaa aaataaaaat       840
     gtacaagtgg ttctcagaac cacttggtcg aaaaaaaaga aaaacattaa ttccgtacta       900
     tcatactatg tcgttttgtt tgaattccgt acttaaagca ctatttgaaa ttgtatacga       960
     aatccctgtt cctggaagtt tagtgggtga tgactgtaca ttacggtgtt actatttacc      1020
     gttccgtttt atctttaccc cgttccgtta tttatcccca atccgttatt tgtccccgat      1080
     atatcggtac tcaattgggt ctcatatccg tacatatata cccttttgac gaaaacaccc      1140
     tcaaaaagct gagataagag gcgcgtgcaa ttgcgctgaa aaagttaaca ttctctctcc      1200
     tatttccggt gaaactatca tttccggtgg ttgccggctt caattcacga cacgcgcggc      1260
     ggtgtgtacc cctgggaggg tagaaaccac tacgctacgc agcagcctta gctacgccgg      1320
     agcttagctc gcccacgttc taatatt                                          1347
//