ID   FJ469628; SV 1; circular; genomic DNA; STD; VRL; 1349 BP.
XX
AC   FJ469628;
XX
DT   29-DEC-2008 (Rel. 98, Created)
DT   25-FEB-2009 (Rel. 99, Last updated, Version 2)
XX
DE   Cotton leaf curl Gezira betasatellite - [okra:Niger] clone NG1-betaFL,
DE   complete sequence.
XX
KW   .
XX
OS   Cotton leaf curl Gezira betasatellite - [okra:Niger]
OC   Viruses; Tolecusatellitidae; Betasatellite.
XX
RN   [1]
RP   1-1349
RX   DOI; 10.1007/s00705-008-0304-6.
RX   PUBMED; 19156351.
RA   Shih S.L., Kumar S., Tsai W.S., Lee L.M., Green S.K.;
RT   "Complete nucleotide sequences of okra isolates of Cotton leaf curl Gezira
RT   virus and their associated DNA-beta from Niger";
RL   Arch. Virol. 154(2):369-372(2009).
XX
RN   [2]
RP   1-1349
RA   Shih S.L., Kumar S., Lee L.M., Green S.K.;
RT   ;
RL   Submitted (17-NOV-2008) to the INSDC.
RL   Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Taiwan,
RL   Republic of China
XX
DR   MD5; 210e8a284f0a6d55ea60a894451a2705.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1349
FT                   /organism="Cotton leaf curl Gezira betasatellite -
FT                   [okra:Niger]"
FT                   /mol_type="genomic DNA"
FT                   /country="Niger:Sadore (45km from Niamey)"
FT                   /isolation_source="Okra"
FT                   /collection_date="2007"
FT                   /clone="NG1-betaFL"
FT                   /db_xref="taxon:555599"
FT   gene            complement(195..548)
FT                   /gene="betaC1"
FT   CDS             complement(195..548)
FT                   /codon_start=1
FT                   /gene="betaC1"
FT                   /product="betaC1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:B8Y3L5"
FT                   /protein_id="ACK77819.1"
FT                   /translation="MTITFRSTKGVHFRVDVFLKHDHIDCRIEVTATKEAYLRKSTFII
FT                   PYNFADVFIPFDFNGSEEEIMNGLKNMFKDTTHQMIKTEELVEVVDMIMAENLNVLGME
FT                   LINHYRIINKSSV"
XX
SQ   Sequence 1349 BP; 425 A; 261 C; 245 G; 418 T; 0 other;
     accgtgggcg agcggttctc ggactgaaat tggtgggtcc cagctattgg gaatggatga        60
     aatcttgaga aattgggcta tatccaaccc aattgttata tatatttaat ttatgattaa       120
     attaatactg cgttaaatga tattataaaa cagataagac ttaaaatatt attcattaca       180
     tataatttaa aacattacac ggatgattta tttatgatgc ggtaatgatt tatgagttcc       240
     atgcctaaaa cgttcaggtt ctcagccatt atcatatcca ccacttcgac taactcctcc       300
     gtcttgatca tctggtgagt ggtgtctttg aacatattct ttaacccatt cattatttcc       360
     tcctcagagc cgttaaagtc gaatgggatg aagacatcag cgaagttgta tggtatgata       420
     aacgttgatt tcctcagata tgcctccttt gttgccgtca cctctatcct gcagtctata       480
     tgatcgtgtt tgaggaagac atcgactctg aagtggactc ctttggtgct cctgaatgtg       540
     atagtcattt tttattatgt ttcgtgttga tcatcaacac gaaatatata gatgattcat       600
     agaaaatatc taatgagtat atggatttaa atggaacacg tatatcttgt attatccata       660
     catatttcgt catccattac gtcatacagg ctcatacgat gtaaagcatc gtaagagata       720
     aaaaataaag agaagaaaaa tcaataaaca ataaataact ataatttaga aaaaaacaag       780
     ggtgcgcagc aaaaaaaaaa accccgaaca gacaaataaa attaaataga aaaagaaaaa       840
     tgtacaagtg gttctcagaa ccacttggtc gaaaaaaaag aaaaacatta attccgtact       900
     atcatactat gtcgttttgt ttgaattccg tacttaaagc actatttgaa attgtatacg       960
     aaatccttgt tcctggaagt ttagtcggtg atgactggac attacggttt tactgtttac      1020
     cgttccgttt tatctttacc ccgttccgtt atttatcccc aatccgttat ttgagtaccg      1080
     atatatcggt actcaattgg gtctcatatc cgtacatata tacccttttg acgaaaacac      1140
     cctcaaaaag ctgagataag aggcgcgtgc aattgcgctg aaaaagttaa cattctctct      1200
     cctatttccg gtgaaactat catttccggt ggttgccgtc ctcaattcac gacacgcgcg      1260
     gcggtgtgta cccctgggag ggtagaaacc actacgctac gcagcagcct tagctacgcc      1320
     ggagcttagc tcgcccacgt tctaatatt                                        1349
//