ID FJ463902; SV 1; circular; genomic DNA; STD; VRL; 2686 BP. XX AC FJ463902; XX DT 24-DEC-2008 (Rel. 98, Created) DT 11-APR-2025 (Rel. 144, Last updated, Version 2) XX DE Corchorus golden mosaic virus isolate Bahraich segment DNA-A, complete DE sequence. XX KW . XX OS Corchorus golden mosaic virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2686 RA Ghosh R., Paul S., Das S., Das A., Palit P., Acharyya S., Ghosh S.K., RA Roy A.; RT "Detection and Characterization of a New World Begomovirus in jute RT (Corchorus capsularis) from India"; RL Unpublished. XX RN [2] RP 1-2686 RA Ghosh R., Paul S., Das A., Palit P., Das S., Acharyya S., Ghosh S.K., RA Roy A.; RT ; RL Submitted (15-NOV-2008) to the INSDC. RL Crop Protection, Centra Research Institute for Jute and Allied Fibrea, RL Barrackpore, Kolkata, West Bengal 700120, India XX DR MD5; 2828c9b4bccfe493281aabf3c4792879. XX CC GenBank Accession Numbers FJ463901-FJ463902 represent the complete CC genome of Corchorus golden mosaic virus [India:Bahraich:2008]. XX FH Key Location/Qualifiers FH FT source 1..2686 FT /organism="Corchorus golden mosaic virus" FT /segment="DNA-A" FT /host="Corchorus capsularis" FT /isolate="Bahraich" FT /mol_type="genomic DNA" FT /geo_loc_name="India: Bahraich" FT /collection_date="2008" FT /clone="CoGMV-A-UP-36" FT /db_xref="taxon:390436" FT gene 228..977 FT /gene="AV1" FT CDS 228..974 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /protein_id="ACK57934.1" FT /translation="MMKREAPWRTNAGTSKVRRSLNFSPRSGLGPKASAWVNRPMYRKP FT RIYRTYRSPDVSKGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCIK FT SVYILGKVWMDDNIKLKNHTNSVMFWLIRDRRPYGTPMDFGQVFNMYDNEPSTATIKND FT LRDRYQVLHRFASKVTGGQYASNEQSLVRRFWKVNNHVVYNHQEAAKYDNHTENALLLY FT MACTHASNPVYATLKIRIYFYDSILN" FT gene complement(971..1363) FT /gene="AC3" FT CDS complement(971..1363) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /protein_id="ACK57935.1" FT /translation="MDLRTGDPITAYQAESSVFTWRVPNPLYFKIISATDLGARHLLLL FT QIRFNHNLRKALQLHKCYLNFRVWTTSRWRISSFCLVFSSRIRRYLDDLGAIGINNVIR FT AVAHAADTLVYVHVEEQHHIIKFNIY" FT gene complement(1101..1616) FT /gene="AC2" FT CDS complement(1101..1616) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /protein_id="ACK57936.1" FT /translation="MEGFQQSSSAILGLLLHIKSTSRRKKIAPSMTGPKKTPSSSPSKS FT HSLIPPIKHRHRHSKKVIRRRRIDLDCGCSIYVSIHCRDDGFTHRGSHHCISGREFRFY FT LEGSKSPIFQDNISNRPRCETPTITADKIQPQPQESTSAPQVLPEFQGLDDLQMEDFEF FT LSSIFFPN" FT gene complement(1420..2490) FT /gene="AC1" FT CDS complement(1420..2490) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /protein_id="ACK57937.1" FT /translation="MSGRFRKQGVSFFLTWPKCPVTKESALDQILALALPTNIIYIRVC FT EEKHQDGSPHLHALVQFQKKFICTNCRLFDLSHPQNSRQFHCHIETARSSSDAKSYIEK FT DGVFCEWGTFQVDGRSARGGQQTINEAYAKALNSGSKDEALTVIKELVPKDYVCQFHNL FT NANLERIFAPPVHVFEPPFPLSSFNNVPAVINQWVNDNIMDAAARPFRPISIVIEGPSR FT TGKTLWARSLGRHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHMKEFMGAQRDWQS FT NCKYGKPIQINGGIPTIFLCNPGPTSSYKEYFEEEKNSAIYDWAKKNAIFVTIEEPFFD FT TADQASTSTLEESNSS" FT gene complement(2037..2339) FT /gene="AC4" FT CDS complement(2037..2339) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /protein_id="ACK57938.1" FT /translation="MGRLTCMPWFNSRRNSSAQIVDYSTSPIHRTHVNSTATLKLRAPP FT PTPNHTSKKTECSANGALSRWTEDRREAVNRQLMRLMQRRLTAEVRTRLLLSLRS" XX SQ Sequence 2686 BP; 738 A; 532 C; 598 G; 818 T; 0 other; accgtgcagc agccaaaaat ttttccgtac actttaattt aaaataaaat tgaaattgat 60 tggcacttta ctttatttta gatctggcca atgatgaaac acgtggcggg tcattttaga 120 cgctttatcc ttatgacata agtttcaatt ttatttgaac tgtttagcgc tataaattta 180 aatttgaatg aaattcaagt actgtcagtg ttagaattcg aaaagaaatg atgaaacgtg 240 aggccccatg gcgtacgaat gctgggacct ccaaggtacg tcgttcttta aatttttcgc 300 cacgaagtgg attgggccct aaagcttctg cttgggttaa tcggcccatg tataggaagc 360 ccaggattta tcgaacgtac agatcacctg atgtttcaaa gggctgtgaa ggcccttgta 420 aggtacagtc atttgaacag cgtcacgaca tttctcatgt cgggaaggtg atgtgtatat 480 ccgatgtcac acgtggtaat ggtatcacac atcgtgttgg taaacgtttc tgtattaagt 540 ctgtttatat tctaggtaaa gtatggatgg acgataatat taaacttaag aaccacacta 600 acagtgttat gttctggtta ataagggata ggagaccata tggtactccc atggattttg 660 gacaggtgtt taacatgtat gataacgagc ctagtaccgc tactatcaag aacgatcttc 720 gtgatcgtta ccaggttttg cataggtttg cgtcgaaggt tactggtgga cagtatgcta 780 gcaacgaaca gtctcttgtg agacgattct ggaaggtgaa caaccatgtg gtgtacaacc 840 atcaagaagc tgctaagtac gataatcaca ctgagaatgc attattattg tatatggcat 900 gtactcatgc atctaatcct gtgtatgcta cgttaaagat acggatctac ttctatgatt 960 cgatcttaaa ttaataaata ttgaatttta ttatatgatg ttgttcttca acatgtacat 1020 aaacgagcgt atccgcagca tgtgcaaccg ctctaattac attgtttatg ccaatggcac 1080 ctaaatcatc taagtaacgt ctaattcggg aagaaaatac tagacagaaa ctcgaaatcc 1140 tccatctgga ggtcgtccaa accctgaaat tcaggtagca cttgtggagc tgaagtgctt 1200 tcctgaggtt gtggttgaat cttatctgca gtaatagtag gtgtctcgca cctaggtctg 1260 ttgctgatat tatcttgaaa tataggggat ttggaaccct ccaagtaaaa acggaactct 1320 ctgcctgata tgcagtgatg ggatcccctg tgcgtaaatc catcgtctcg gcagtggatg 1380 cttacatata tggagcaacc gcagtccagg tcaattcgtc tacgacgaat tactttcttc 1440 gagtgtcgat gtcgatgctt gatcggcggt atcaaagaat ggctcttcga tggtgacgaa 1500 gatggcgttt tttttggccc agtcatagat ggcgctattt ttttcctcct cgaagtactc 1560 tttatatgaa gaagtaggcc caggattgca gaggaagatt gttggaatcc ctccatttat 1620 ttgaattggt ttgccgtact tgcagttgga ctgccagtct ctctgggccc ccataaattc 1680 cttcatatgc tttagatagt gcggatcgac gtcatcaatg acgttgtacc aggcttcatt 1740 ggagtagact tttgggctta gatcaagatg gccacataga tagttgtgac gacccaaact 1800 tctggcccat aatgtctttc ctgtcctgga tgggccttca atgacaatag atatcggcct 1860 aaaaggccgc gcagcggcat ccattatatt atcgttaacc cactgattaa ttacagcagg 1920 aacgttatta aacgatgata gtgggaacgg tggctcaaaa acatgtactg gaggagcaaa 1980 gatcctctcc aaattggcgt taagattatg aaattgacat acataatctt ttggaactaa 2040 ctccttaatg acagtaagag cctcgtcctt acttccgctg ttaagcgcct ttgcataagc 2100 ctcattaatt gtctgttgac cgcctctcgc cgatcttccg tccacctgga aagtgcccca 2160 ttcgcagaac actccgtctt tttcgatgta tgatttggcg tcggaggagg agcgcgcagt 2220 ttcaatgtgg cagtggaatt gacgtgagtt ctgtggatgg gagaggtcga ataatcgaca 2280 atttgtgcag atgaatttct tctggaattg aaccaaggca tgcaagtgag gcgacccatc 2340 ttgatgtttt tcctcacaaa ccctaatata aatgatattt gttggaaggg ctaatgctaa 2400 tatttgatct aaggctgact ctttagtaac agggcatttt ggccacgtga gaaaaaaaga 2460 aacgccttgt ttcctaaaac gaccgctcat cttgcgtttt aaatcggaga caatcaaagt 2520 ctctgatatc caatatatcg gagccaattt ataggtctcc caatatttgt actaagagcg 2580 tgcagagcct ttttatacgg acgcgaaggg cattatagtc atttcatata atagtttagc 2640 gtgttttttg ggttccaatc ctctgctgct gcacgctccc attatt 2686 //