Dbfetch
ID FJ463805; SV 1; linear; genomic RNA; STD; VRL; 1455 BP. XX AC FJ463805; XX DT 29-JUL-2010 (Rel. 105, Created) DT 15-OCT-2010 (Rel. 106, Last updated, Version 3) XX DE Hop mosaic virus isolate AUS-FR-2B triple gene block protein 3, coat DE protein, and nucleic acid binding protein genes, complete cds. XX KW . XX OS Hop mosaic virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-1455 RX DOI; 10.1007/s00705-010-0780-3. RX PUBMED; 20680359. RA Poke F.S., Crowle D.R., Whittock S.P., Wilson C.R.; RT "Molecular variation of hop mosaic virus isolates"; RL Arch. Virol. 155(10):1721-1724(2010). XX RN [2] RP 1-1455 RA Poke F.S.; RT ; RL Submitted (14-NOV-2008) to the INSDC. RL Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St RL Johns Ave, New Town, Tasmania 7008, Australia XX DR MD5; 7c2ff3dd0e227c2b823de3ecacf932a6. XX FH Key Location/Qualifiers FH FT source 1..1455 FT /organism="Hop mosaic virus" FT /host="hop cultivar Nugget" FT /isolate="AUS-FR-2B" FT /mol_type="genomic RNA" FT /country="Australia" FT /db_xref="taxon:142843" FT CDS 1..207 FT /codon_start=1 FT /product="triple gene block protein 3" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:E1U5Y4" FT /protein_id="ACS45264.1" FT /translation="MSLNLVCACAGLVCFACILVYLSGGGNSCIVVLTGESVRFQGCEV FT TEEFARALSNVKSLGGCGTLGLE" FT CDS 224..1147 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:E1U5Y5" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/TrEMBL:E1U5Y5" FT /protein_id="ACS45265.1" FT /translation="MSGSTEAGKLAPEAQKPKHGGEETKLKEKVGAGESSTVSVDDYAA FT GLKDLEAVREEMLEARLEKLREFMRRRRSAVQITNSGLETGRPALTLTADMRSDPANPY FT CKPSLDSLLRIPPKPVSNNMATAEDIMRIYTNLEGLGVPTEHIQRVIIQAVIYCKDASS FT SVYLDPRGSFEWPGGAIAADSVLAIMKKDAETLRRVCRLYAPVTWSYMLVHNQPPSDWA FT AMGFQFEDRFAAFDCFDYVENAAAVQPLEGIVRRPTPREKLAHNTHKDMALRKANRNQH FT FGNMDVEVTGGRSGPEIIRDYSKSSR" FT CDS 1147..1455 FT /codon_start=1 FT /product="nucleic acid binding protein" FT /db_xref="GOA:E1U5Y6" FT /db_xref="InterPro:IPR002568" FT /db_xref="UniProtKB/TrEMBL:E1U5Y6" FT /protein_id="ACS45266.1" FT /translation="MMHWWRAAVLLYKVMFDVCGRSSLYICVDIARRAGRPIGGGKSSY FT ARKRRAIKMGRCVRCYRVSPPFYHTTRCDGLSCVPGLSLNAGVARLIKGGVTEVIPS" XX SQ Sequence 1455 BP; 349 A; 309 C; 429 G; 368 T; 0 other; atgtcattaa atctggtctg cgcctgtgcc gggttagttt gcttcgcttg cattttagtg 60 tacctgagtg gtggaggcaa tagctgtata gttgttctaa cgggggaatc tgttaggttc 120 caaggttgcg aggtcacaga agagttcgca cgtgccttat caaacgtcaa gtcccttggg 180 ggttgtggta ctttaggttt agagtgaata attgatcaaa ataatgtctg ggagtactga 240 agcaggaaag cttgcccctg aggcccagaa accgaagcat ggtggggaag agaccaagct 300 caaagagaaa gtgggggctg gcgagtcctc aaccgtgagt gtagatgatt acgctgccgg 360 gctcaaagat ctggaggcgg tccgggagga aatgctagaa gcgagattgg agaaactgag 420 ggaatttatg cgcaggcggc gcagtgctgt tcaaatcacg aattctggct tggaaactgg 480 taggccggcg ttgacactta ctgctgatat gcgctctgac ccagccaacc cttactgtaa 540 accatctctt gactcactgc tgcgtatacc gccgaaacct gtttccaata acatggccac 600 cgcagaggac ataatgagaa tctatacaaa cttggagggg ctaggtgttc cgactgagca 660 catacaaagg gtaatcattc aggcagtgat atattgtaag gatgcgagca gctctgtata 720 tctagatcca aggggctctt ttgagtggcc tggcggggcc attgcagctg actcagtact 780 ggctattatg aagaaggacg cagaaacact tcggagggtc tgtcgattgt atgcacccgt 840 gacgtggtct tacatgttgg tgcacaacca gccaccctct gactgggcgg ccatggggtt 900 tcagttcgag gaccgctttg ctgccttcga ctgcttcgat tatgttgaga atgcagctgc 960 tgtacaaccg cttgaaggca ttgtaaggcg accaactcca agggagaagt tggcgcacaa 1020 cacacacaaa gatatggccc ttcgaaaagc caataggaat cagcactttg ggaatatgga 1080 cgtggaggtc accggcggcc gcagtggccc agagattatc cgtgattatt ccaagtcgag 1140 taggtaatga tgcactggtg gcgtgctgct gtgttattat ataaagttat gtttgatgtg 1200 tgtggtaggt ctagtcttta catttgcgtt gatatagctc ggagggcggg ccgtcctatt 1260 gggggcggta agtcgtccta tgctcgtaag agacgtgcaa taaagatggg gcgatgtgtg 1320 cggtgctacc gcgtctcacc gcctttctat catactacta gatgtgacgg tttgtcgtgt 1380 gtacctgggc tctcgctaaa tgctggcgtc gccaggttaa tcaagggtgg agtaactgag 1440 gtgatcccat cctag 1455 //