Dbfetch
ID FJ463800; SV 1; linear; genomic RNA; STD; VRL; 1455 BP. XX AC FJ463800; XX DT 29-JUL-2010 (Rel. 105, Created) DT 15-OCT-2010 (Rel. 106, Last updated, Version 3) XX DE Hop mosaic virus isolate AUS-BP-4E triple gene block protein 3, coat DE protein, and nucleic acid binding protein genes, complete cds. XX KW . XX OS Hop mosaic virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-1455 RX DOI; 10.1007/s00705-010-0780-3. RX PUBMED; 20680359. RA Poke F.S., Crowle D.R., Whittock S.P., Wilson C.R.; RT "Molecular variation of hop mosaic virus isolates"; RL Arch. Virol. 155(10):1721-1724(2010). XX RN [2] RP 1-1455 RA Poke F.S.; RT ; RL Submitted (14-NOV-2008) to the INSDC. RL Tasmanian Institute of Agricultural Research, University of Tasmania, 13 St RL Johns Ave, New Town, Tasmania 7008, Australia XX DR MD5; af8e35852c34f9f5ae7cddc43a88d191. XX FH Key Location/Qualifiers FH FT source 1..1455 FT /organism="Hop mosaic virus" FT /host="hop cultivar Styrian" FT /isolate="AUS-BP-4E" FT /mol_type="genomic RNA" FT /country="Australia" FT /db_xref="taxon:142843" FT CDS 1..207 FT /codon_start=1 FT /product="triple gene block protein 3" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q8V976" FT /protein_id="ACS45249.1" FT /translation="MSLNLVCACVGLVCFACILVYLSGGGNSCIVVLTGESVRFQGCEV FT TEEFARALSNVKSLGGCGTLGLE" FT CDS 224..1147 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:E1U5V5" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/TrEMBL:E1U5V5" FT /protein_id="ACS45250.1" FT /translation="MSGSTEAGKPAPEAQKPKHGGEETKLKEKVGTGESSTVSVDDYAA FT GLKDLEAVREEMLEARLEKLREFMRRRRSAVQITNSGLETGRPALTLTADMRSDPANPY FT CKPSLDSLLRIPPKPVSNNMATAEDIMKIYTNLEGLGVPTEHIQRVIIQAVIYCKDASS FT SVYLDPRGSFEWPGGAIAADSVLATMKKDAETLRRVCRLYAPVTWSYMLVHNQPPSGWA FT AMGFQFEDRFAAFDCFDYVENAAAVQPLEGIVRRPTPREKLAHNTHKDMALRKANRNQH FT FGNMEVEVTGGRSGPEIIRDYSKSSR" FT CDS 1147..1455 FT /codon_start=1 FT /product="nucleic acid binding protein" FT /db_xref="GOA:B2CMM2" FT /db_xref="InterPro:IPR002568" FT /db_xref="UniProtKB/TrEMBL:B2CMM2" FT /protein_id="ACS45251.1" FT /translation="MMHWWRAAMLLYKVMFDVCGRSSLYICVDIARRAGRPIGGGKSSY FT ARKRRAIKMGRCVRCYRVSPPFYHTTRCDGLSCVPGLSLNAGVARLIKGGVTEVIPS" XX SQ Sequence 1455 BP; 354 A; 312 C; 427 G; 362 T; 0 other; atgtcattaa acctggtctg cgcctgtgtc gggttagttt gcttcgcttg cattttagtg 60 tacctgagtg gtggaggcaa tagctgcata gttgttctaa cgggggaatc agttaggttc 120 caaggttgcg aggtcacaga agagttcgca cgtgccttat caaacgtcaa gtcccttggg 180 ggttgtggta ctttaggttt agagtgaata attgatcaaa ataatgtctg ggagtactga 240 agcaggaaag cctgcccctg aggcccaaaa accgaagcat ggtggggaag agaccaagct 300 caaagagaaa gtggggactg gcgagtcctc aaccgtgagt gtagatgatt acgctgccgg 360 gctcaaagat ctggaggcgg tccgggagga aatgctagaa gcgagattag agaagctgag 420 ggaatttatg cgcaggcggc gcagtgctgt tcaaatcacg aattctggct tggaaactgg 480 taggccggcg ttgacactta ctgctgatat gcgctctgac ccggccaacc cttactgtaa 540 accatctctt gactcactgc tgcgtatacc gccgaaacct gtttccaata acatggccac 600 cgcagaggac ataatgaaaa tctatacaaa cttggagggg ctaggtgttc cgactgagca 660 catacaaagg gtaatcattc aggcagtgat atattgtaag gatgcgagca gctctgtata 720 tctagatcca aggggctctt ttgagtggcc tggcggggcc attgcagctg actcagtact 780 ggctactatg aagaaggacg cagaaacact ccggagggtc tgccgattgt atgcacccgt 840 gacgtggtct tacatgttgg tgcacaacca gccaccctct ggctgggcgg ccatggggtt 900 tcagttcgaa gatcgctttg ctgccttcga ctgcttcgat tatgttgaga atgcagctgc 960 tgtacaaccg cttgaaggca ttgtgaggcg accaactcca agggagaagt tggcgcacaa 1020 cacacacaaa gatatggccc ttcgaaaagc caataggaat cagcactttg ggaatatgga 1080 agtggaggtc accggcggcc gcagtggccc agagattatc cgtgattatt ccaagtcgag 1140 taggtaatga tgcactggtg gcgtgctgct atgttattat ataaagttat gtttgatgtg 1200 tgtggtaggt ctagtcttta catttgtgtt gatatagctc ggagggcggg ccgtcctatt 1260 gggggcggta agtcgtccta tgcgcgtaag agacgcgcaa taaagatggg gcgatgtgtg 1320 cggtgctacc gcgtctcacc gcctttctat catactacta gatgtgacgg tttgtcgtgt 1380 gtacctggac tctcgctaaa tgctggcgtc gccaggttaa tcaagggtgg agtaactgag 1440 gtgatcccat cctag 1455 //