ID   FJ461349; SV 1; linear; genomic RNA; STD; VRL; 1609 BP.
XX
AC   FJ461349;
XX
DT   29-DEC-2008 (Rel. 98, Created)
DT   29-DEC-2008 (Rel. 98, Last updated, Version 1)
XX
DE   Raphanus sativus cryptic virus 3 segment 1, complete sequence.
XX
KW   .
XX
OS   Raphanus sativus cryptic virus 3
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1609
RA   Tian Q., Li L., Chen J.;
RT   "Complete nucleotide sequences of two double-stranded RNA segments
RT   extracted from the Raphanus sativus root cv. Yidianhong";
RL   Unpublished.
XX
RN   [2]
RP   1-1609
RA   Tian Q., Li L., Chen J.;
RT   ;
RL   Submitted (13-NOV-2008) to the INSDC.
RL   Life Science Department, Institute of Bioengineering, Zhejiang Sci-Tech
RL   University, Xiasha, No 2 Road, Hangzhou, Zhejiang 310018, China
XX
DR   MD5; 6619783499a36f1cbae70a0f1bd61f6e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1609
FT                   /organism="Raphanus sativus cryptic virus 3"
FT                   /segment="1"
FT                   /host="Raphanus sativus cv. Yidianhong"
FT                   /isolate="RasR7"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="leaves"
FT                   /collection_date="Mar-2008"
FT                   /db_xref="taxon:580254"
FT   CDS             101..1546
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:B8Y0L1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B8Y0L1"
FT                   /protein_id="ACJ76981.1"
FT                   /translation="MRRLRNPLAGYVYTGFISDLEETNQRHTNVIRRETAVTYRDEFAL
FT                   QSILDLDYRQYEQHLQGWSRSYYTPEKHQEAILQYSYPDIPVQAIKMDVYNDCIAQVQN
FT                   EFRSLPNVRAYSVLTQLDLVKYKSSSAAGYGYQGTKGNPGELNHARAISRAKAVLWSAI
FT                   AADGEGIEHVIKTSTPDIGYTRTQLTDLTEKTKVRQVWGRAFHYILLEGLVADPFIQAV
FT                   MENNTFIHAGRDPTLSVPQLLSHIAETSDWIYSLDWKQFDATVSRFEIESAFTIIKSKT
FT                   IFPDRETEDAFEITKQLFIHKKVAAPDGKIYFAHKGIPSGSYYTSLVGSIVNRLRIEYL
FT                   YRLILGRGPKICHTLGDDSLVGDDELIVPSSFGLIANRIGWYFNIEKTEYSRIPEMVSF
FT                   LGRSYKGGLNVRDLKRCLRLLVFPEYPVPSGRISAYRAKSIAEDCGGISDLLNRVAARL
FT                   KRQYGLASEEEVPIYFKRYLPFM"
XX
SQ   Sequence 1609 BP; 510 A; 343 C; 336 G; 420 T; 0 other;
     agaattttcc ccgaaacaca taatcgcgga accaagactt agcagttaag gtcgcaagat        60
     ttcggtcgtg aaaatcattt cattacagcc agtcttcatc atgagaagat tgcgcaaccc       120
     tttagctggt tacgtttaca caggattcat ctcggatctt gaagagacaa atcagcgaca       180
     cacaaacgtt attcgacggg aaaccgccgt aacgtacagg gatgagtttg cattgcaatc       240
     catcctagat ctggactaca ggcagtacga gcaacatcta caaggttggt cgcgtagtta       300
     ttacacccct gagaagcatc aggaagcaat tttacaatac tcctatccag acataccagt       360
     tcaagccatt aaaatggacg tatacaacga ttgtatcgcc caggttcaga acgaatttcg       420
     tagccttcca aacgtgaggg cctatagcgt attaacccaa ttagatttgg ttaaatacaa       480
     gtcatcatcg gcggccggtt acggatacca aggtactaaa ggaaatccag gtgagttaaa       540
     tcacgccagg gctatttccc gagccaaagc ggttttatgg tcagccatcg cagcagacgg       600
     tgaaggcatc gaacatgtca tcaagacctc aacgccagac ataggctata cacgtaccca       660
     gcttacagat ctcacagaga agacgaaagt cagacaagta tggggtagag cttttcatta       720
     catcctgtta gaaggattgg tcgcagaccc attcattcaa gcagtaatgg agaacaatac       780
     attcatccat gctggacgag atccaacact aagcgtgcca cagttattat cgcacatcgc       840
     ggaaacaagt gactggatat attcattaga ttggaaacaa tttgatgcaa cagttagcag       900
     attcgaaatt gagtcagctt ttactattat caagtccaag acgatcttcc cagacagaga       960
     aacggaagat gcttttgaga taaccaaaca gttattcatt cataagaaag tcgccgctcc      1020
     agacggtaaa atttacttcg cgcacaaagg aattccatca ggaagttatt acacttcgct      1080
     agtcggatct attgttaata gactcaggat tgagtatcta tacagactaa ttttaggacg      1140
     aggtcccaag atatgtcata cattaggaga cgattcacta gtaggtgatg acgagttgat      1200
     agtcccatcc tcattcggcc ttatcgccaa tcgtatcggg tggtacttca atattgaaaa      1260
     gacggagtac tcgagaatac cagagatggt ttcatttcta ggtcgatcct acaaaggagg      1320
     tctcaacgta cgagatctta aacgatgttt aagattacta gtctttcctg aataccctgt      1380
     cccatcagga agaatttcag catacagagc taaatcgata gcagaagatt gcggaggcat      1440
     cagcgatcta ctaaatcgag tagcagcaag attaaagcgt cagtacggac tcgcttctga      1500
     agaagaagtt ccaatctatt ttaagcgtta tttacctttt atgtaattta catttaagtt      1560
     atttaaagtt ttattaataa gacgtggagg ttacatttat tttccctcc                  1609
//