ID FJ459582; SV 1; circular; genomic DNA; STD; VRL; 2140 BP. XX AC FJ459582; XX DT 03-MAR-2009 (Rel. 100, Created) DT 15-APR-2009 (Rel. 100, Last updated, Version 2) XX DE California sea lion anellovirus, complete genome. XX KW . XX OS Torque teno zalophus virus 1 OC Viruses; Anelloviridae; Lambdatorquevirus. XX RN [1] RP 1-2140 RX DOI; 10.1099/vir.0.008987-0. RX PUBMED; 19264590. RA Ng T.F., Suedmeyer W.K., Wheeler E., Gulland F., Breitbart M.; RT "Novel anellovirus discovered from a mortality event of captive California RT sea lions"; RL J. Gen. Virol. 90(Pt 5):1256-1261(2009). XX RN [2] RP 1-2140 RA Ng T.F.F., Suedmeyer W.K., Wheeler E., Gulland F., Breitbart M.; RT ; RL Submitted (10-NOV-2008) to the INSDC. RL College of Marine Science, University of South Florida, 140 7th Ave S, RL Saint Petersburg, FL 33701, USA XX DR MD5; 28826560e05242a0ff5f353bad1cb4ac. DR EuropePMC; PMC3818428; 24223918. XX FH Key Location/Qualifiers FH FT source 1..2140 FT /organism="Torque teno zalophus virus 1" FT /host="Zalophus californianus" FT /mol_type="genomic DNA" FT /isolation_source="lung" FT /db_xref="taxon:1218490" FT regulatory 59..64 FT /regulatory_class="TATA_box" FT CDS 225..644 FT /codon_start=1 FT /product="Orf2" FT /db_xref="GOA:C0JSK7" FT /db_xref="UniProtKB/TrEMBL:C0JSK7" FT /protein_id="ACN38866.1" FT /translation="MEDIRTLWKVTFDLLYDNNYFPSTGMYPCFDEKEICLCLAWTLLL FT IGFSTLLILTIQLIISVRRLNGSVNALISIKNSAGVVTGQTISPKNAISEEVQAPEMEE FT TLQEVPLSEESPLVGAQTQKMASPTKNACGKIPSF" FT CDS 496..1905 FT /codon_start=1 FT /product="Orf1" FT /db_xref="GOA:C0JSK8" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:C0JSK8" FT /protein_id="ACN38865.1" FT /translation="MPFRRRFRRRRWRRPFRRYHYRRNRHWWGRRRRKWRHRRRMPAVR FT YHPSRRHKYIVIRGIEPLGNLCTDHTPSWLRATPGRSFESAGQTLGEWEGTWGAHHHSF FT AGLLLRAQCRFATFSGDWKSYDYIEYKGGTFYIPPQCTTFLFGIDPQFTKISKEGEKEQ FT PNEETWLHPGWLLHQRGTHIIYSKDIKPWRRWYKLRVKPGPTWEGPYSLPNAFNFIMSQ FT WWWSWLDFQHAFEDNTRSQICHADPQNFSLFCGQKPWWFDSTYKNTIEIPKRLVNKACN FT AWVNRQEYMIKIGQKVTDKMLHPEDDILCGNQSQQSQKKYFQQQNPGWGPFLPLLYNGD FT NCSLWFKYRYVFKVSGDCEYRKTPSTDLTQMVPTAPGPWNAEGDRPQIQSRSILKKSRK FT RPLDTADILLGDTDDGILTETGLERISGPSPKDLLCGMENTPPKRVRFRQSDVLRKHKH FT RILNLIDQLSR" FT CDS 1508..1996 FT /codon_start=1 FT /product="Orf3" FT /db_xref="UniProtKB/TrEMBL:C0JSK9" FT /protein_id="ACN38867.1" FT /translation="METIAHSGSNTVMSLRSLETVNTEKLQVQTSHKWSQQHQDHGTQR FT EIAHKYNLVPYSKNQEKDHLTQQTSSSETQMTGSSRRQALRELVDLVQKTSYAEWKTLH FT QNEFDSDSQMSYESTSTESSISLISYPDEGGETPPYTPPVEEGAFTSPFLPVDCSTQI" FT regulatory 1996..2002 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 2140 BP; 674 A; 454 C; 489 G; 523 T; 0 other; actcattctc gcgagagaat gagtcactat gacatcaaaa ggggtggaga caacacacta 60 taaattcaag taccatgggg aatggctgag tttttgccgc tccagggcca agaaaacgca 120 gcttctggta agcaagtgtc ttggagcctg ggcgggtgca ggaggccaaa ggccggatca 180 aggggcttat cgggcagagc gaccctggag cggaaaaggg ctcaatggag gatattagga 240 cgctatggaa agtaacattt gacctgttat atgataacaa ctactttcct tcaacaggta 300 tgtacccatg ttttgatgaa aaagaaatat gtctttgtct cgcatggaca ttgttgctga 360 ttggattctc aactctcctg atcttgacca tacagttaat tataagcgta aggaggctga 420 atggaagcgt aaatgctctg atctccataa agaattctgc tggtgtggtg actggacaaa 480 ccatatcacc aaaaaatgcc atttcggagg aggttcaggc gccggagatg gaggagaccc 540 ttcaggaggt accactatcg gaggaatcgc cactggtggg ggcgcagacg cagaaaatgg 600 cgtcaccgac gaagaatgcc tgcggtaaga taccatcctt ctagaagaca taaatatata 660 gtaataagag gcatagaacc tttaggaaac ctatgtacag atcatacacc atcctggcta 720 agagctactc ctggtagatc ctttgaatct gctggacaaa ctcttggaga atgggagggg 780 acttgggggg ctcatcatca cagttttgct ggactattat taagagcaca atgtagattt 840 gctactttta gtggagactg gaaaagctat gactatattg aatataaagg aggcaccttt 900 tacatacctc cacaatgtac aacattcctt tttggtattg atcctcaatt tactaaaata 960 tctaaagagg gagaaaaaga acagccaaat gaggaaacct ggctacatcc aggctggctt 1020 ttacatcaaa gaggcactca cataatctat tcaaaagaca taaaaccttg gagaaggtgg 1080 tataaactta gagtaaaacc tggacctact tgggaaggac catattcact tccaaatgca 1140 tttaacttta taatgtccca atggtggtgg tcttggcttg attttcaaca tgcctttgag 1200 gacaatacaa gaagtcaaat ctgtcatgca gatcctcaaa acttttctct gttttgtgga 1260 caaaaaccat ggtggtttga cagtacatac aaaaatacaa ttgaaatacc aaaaagactt 1320 gtaaataaag cctgtaatgc ctgggttaat agacaagaat atatgattaa aattggacaa 1380 aaagtaactg ataaaatgct tcatcctgaa gacgacattc tatgtgggaa tcaatctcaa 1440 caaagtcaaa aaaaatattt tcaacaacaa aatcctggtt ggggaccttt tttacctctt 1500 ctatataatg gagacaattg ctcactctgg ttcaaatacc gttatgtctt taaggtctct 1560 ggagactgtg aatacagaaa aactccaagt acagacctca cacaaatggt cccaacagca 1620 ccaggaccat ggaacgcaga gggagatcgc ccacaaatac aatctcgttc catactcaaa 1680 aaatcaagaa aaagaccact tgacacagca gacatcctcc tcggagacac agatgacggg 1740 atcctcacgg agacaggcct tgagagaatt agtggaccta gtccaaaaga cctcctatgc 1800 ggaatggaaa acactccacc aaaacgagtt cgattccgac agtcagatgt cctacgaaag 1860 cacaagcacc gaatcctcaa tctcattgat cagttatcca gatgaagggg gggagacccc 1920 cccttacacc ccccccgtag aggagggtgc cttcacttcc ccttttttgc cagttgattg 1980 cagcacccaa atttaaataa aaggaagttg tggtttaaaa atggagtctg tggttttgtg 2040 gtcggctagg gaaatcctgg gcggagccaa ggcggggcta cccttcaggg ttacttctct 2100 ttttgtgtct ggggcacgcc cctcctgagg ggggggcccc 2140 //