ID FJ455449; SV 1; circular; genomic DNA; STD; VRL; 2774 BP. XX AC FJ455449; XX DT 09-FEB-2009 (Rel. 99, Created) DT 09-FEB-2009 (Rel. 99, Last updated, Version 1) XX DE Sunn hemp leaf distortion virus clone SHLD-FL-Bar-01 segment DNA-A, DE complete sequence. XX KW . XX OS Sunn hemp leaf distortion virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2774 RA Das A., Ghosh R., Paul S., Das S., Palit P., Acharyya S., Ghosh S.K., RA Roy A.; RT "Characterization of Begomovirus complex associated with leaf distortion RT disease of sunnhemp from eastern India"; RL Unpublished. XX RN [2] RP 1-2774 RA Das A., Ghosh R., Paul S., Das S., Palit P., Acharyya S., Ghosh S.K., RA Roy A.; RT ; RL Submitted (12-NOV-2008) to the INSDC. RL Crop Protection, CRIJAF, Barrackpore, Kolkata, West Bengal 700120, India XX DR MD5; 4be633e163f589cf83a0e8170373a7b4. XX FH Key Location/Qualifiers FH FT source 1..2774 FT /organism="Sunn hemp leaf distortion virus" FT /segment="DNA-A" FT /host="Crotalaria juncea" FT /mol_type="genomic DNA" FT /country="India:Barrackpore" FT /collection_date="2008" FT /clone="SHLD-FL-Bar-01" FT /db_xref="taxon:579113" FT gene 147..503 FT /gene="AV2" FT misc_feature 147..503 FT /gene="AV2" FT /note="nonfunctional pre-coat protein due to mutation" FT gene 308..1081 FT /gene="AV1" FT misc_feature 308..1081 FT /gene="AV1" FT /note="nonfunctional coat protein due to mutation" FT gene complement(1086..1490) FT /gene="AC3" FT CDS complement(1086..1490) FT /codon_start=1 FT /gene="AC3" FT /product="transcription enhancer protein" FT /db_xref="GOA:B9V4F2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B9V4F2" FT /protein_id="ACM62305.1" FT /translation="MDSRTGELITAAQAEIGVFIWEIQNPLYFKILEHQNRPFLINQDT FT RTVRIQFNHNLRKALGIHNCFLFYRIWMSSQPQTGRFFWVLKTEVFKYLDNLGIISINN FT VNRAVDHVLWNVLQHIVYVDQSYSITFNIY" FT gene complement(1225..1650) FT /gene="AC2" FT CDS complement(1225..1650) FT /codon_start=1 FT /gene="AC2" FT /product="replication enhancer protein" FT /db_xref="GOA:B9V4F3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B9V4F3" FT /protein_id="ACM62304.1" FT /translation="MGFTECDLRHPRRPTLLRYQSKCSTGYPRRGPDVDVFDSLVDIHI FT SYHSPVHDHGFTHRGTHHCSSSRDWRVYLGDSKSPLFQDTRAPEPSISHQPRYKNRPNT FT VQSQPKESTGDSQLFPILPNLDVFTASDWSFLLGLKD" FT gene complement(1538..2623) FT /gene="AC1" FT misc_feature complement(1538..2623) FT /gene="AC1" FT /note="nonfunctional replication initiator protein due to FT mutation" FT gene complement(2158..2469) FT /gene="AC4" FT misc_feature complement(2158..2469) FT /gene="AC4" FT /note="nonfunctional AC4 due to mutation" XX SQ Sequence 2774 BP; 762 A; 556 C; 635 G; 821 T; 0 other; accggatggc cgcgcaaatt tttaaagtgg tcccccccac taactcatgt cgcgtaacac 60 gtggacgaat gaaatgagct cctcgtggct taattatttt gtggtcccct atttaaactt 120 ccgcagcaag tagtgcattc cgcactatgt ggggatccat tagtaaacga gtttcccgaa 180 accgttcacg gttttacatg tctgttagca gttatatatc tccagttagt agaaaagact 240 tattctcctc acacattagg gcacgattta atttgggatt taatttcagt aattacggca 300 agaaattatg tcgaagcgac cagcagatat attcatttcc acgcccgctt cgaaggtacg 360 ccgccgtctc aacttcgaca gcccatatgt gtgccgtgct gctgccccca ttgtccgcgt 420 caccaaagca aaagcatggg cgaacaggcc cacgaacaga aagcccagga tgtacaggat 480 gtacagaagt ccagatgtcc taggaggatg tgaaggccca tgtaaggtcc agtcttttga 540 gtccagacat gatattcagc atataggtaa agtcatgtgt gtcagtgatg ttacgcgtgg 600 aactgggctg acccatcgag tgggtaaaag gttttgtgtt aaatctgttt atgtcttggg 660 taagatctgg atggacgaaa atattaagac caaaaatcac acgaatagtg tgatgttttt 720 tttagttagg gatcgtagac ctgtggataa acctcaagat tttggagagg tttttaacat 780 gtttgataat gagcccagta cggctactgt gaagaatgtt catcgtgata ggtatcaagt 840 tcttcggaag tggcatgcaa ctgtgactgg tggacaatat gcgtcaaagg aacaagctct 900 cgtgaagaag tttattaggg ttaataatta tttaataatt atgttgttta taaccagcaa 960 gaagctggca agtatgagaa tcattctgag aatgcgttat tgttgtatat ggcatgtact 1020 catgcctcta acccagtgta tgctactttg gagatacgga tctatttcta tgattccgta 1080 acaaattaat aaatattaaa tgttattgaa taagattggt ctacatatac aatatgttgt 1140 aatacattcc ataatacatg atcaactgca cgatttacat tattaatact gataattcct 1200 aaattatcta aatatttaaa tacttcagtc tttaagaccc aaaagaaacg accagtctga 1260 ggctgtgaag acatccagat tcggtagaat aggaaacagt tgtgaatccc cagtgctttc 1320 cttaggttgt gattgaactg tattcggacg gttcttgtat cttggttgat gagaaatgga 1380 cggttctggt gctcgagtat cttgaaataa aggggatttt gaatctccca gataaacacg 1440 ccaatctctg cttgagctgc agtgatgagt tccccggtgc gtgaatccat gatcgtggac 1500 aggcgagtgg tatgaaatat gaatatccac aagggagtca aacacgtcga cgtctggtcc 1560 ccttcttggg tagcctgtgc tgcactttga ttggtacctg agtagagtgg gccttcgagg 1620 gtgacgaaga tcgcattctg taaagcccat tttttaagtg cgctattttt ctcttcatcc 1680 aagaactctt tatagcttga gttgggtcct ggattgcaga ggaagatagt gggaattccg 1740 cctttaattt gaactggctt tccgtatttc gtgttgcttt gccagtccct ttgggccccg 1800 atgaattcct taaagtgctt gaaataatcc ggatcaacgt catcaatgac gttgtaccac 1860 gcatcattat tgtagacctt aggactaagg tcaaagtgac cacacaggta attatgtgga 1920 cccaaagacc tagcccacgt ggtcttcccc gttctactat caccctctgt gacaatacgc 1980 ttgggtctga aagtccgcgc agcggcacac accactttct cagcagccca ttcttcaagt 2040 tcctctggaa cttggtcaaa agaagaagaa gaaaaaggag aaatatattc ctcgatagga 2100 ggagtaaata ttctatcaaa attagcagat agattatgaa attgtaatac acaatcttta 2160 ggtgctgatt cctgcaagac tgtaagagcc tctgacgtac tgcctgcgat aagtgctgcg 2220 gcgtaagcgg cattggctgt ctgttgaccc cctcttgcag atcttccatc gatctgaaac 2280 tctcccccag tcgagggtgt ctcccgtcct tctccaggta ggacttgacg tccgagcttg 2340 atttagctcc ctgaatgttc ggatggaaat gtgctgatct ggttggggat accaggtcga 2400 agaatctgtt attctggcac ttgtatttcc cctcgaactg gatgagcacg tgaagatgag 2460 gttccccatt ttcaagaagc tctctgcaga tcttgatgta ttttttattt gttggggttt 2520 gtaggttttg aaattgggaa agtgcttcct ctttagtaag agagcatttc ggataagtga 2580 gaaaataatt tttagagtta atgaggaaac gcttgggagg catgttgact aaaatagagg 2640 acccgattga ccgctcttgc aactctcccc tgtatattgg gtctcaatat atagtgagac 2700 ccaaatggca tattcgtaat ttggtaaagg aattcaaaat ttacacgctc caaagcggcc 2760 atccgtataa tatt 2774 //