ID   FJ442949; SV 1; linear; genomic RNA; STD; VRL; 1125 BP.
XX
AC   FJ442949;
XX
DT   01-DEC-2009 (Rel. 103, Created)
DT   01-DEC-2009 (Rel. 103, Last updated, Version 1)
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DE   Turnip ringspot virus isolate M12 large capsid protein gene, partial cds.
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KW   .
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OS   Turnip ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus;
OC   unclassified Comovirus.
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RN   [1]
RP   1-1125
RA   Petrzik K., Koloniuk I., Franova J.;
RT   "Taxonomy and molecular phylogeny of the genus Comovirus";
RL   Unpublished.
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RN   [2]
RP   1-1125
RA   Petrzik K., Koloniuk I.;
RT   ;
RL   Submitted (07-NOV-2008) to the INSDC.
RL   Department of Plant Virology, Biology Centre Academy of Sciences of the
RL   Czech Republic, Institute of Plant Molecular Biology, Branisovska 31, Ceske
RL   Budejovice 370 05, Czech Republic
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DR   MD5; df125675a9b5b370670a4ee271a25c6a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1125
FT                   /organism="Turnip ringspot virus"
FT                   /isolate="M12"
FT                   /mol_type="genomic RNA"
FT                   /country="Russia"
FT                   /db_xref="taxon:392504"
FT   CDS             <1..>1125
FT                   /codon_start=1
FT                   /product="large capsid protein"
FT                   /note="CP-L"
FT                   /db_xref="GOA:D2D3N9"
FT                   /db_xref="InterPro:IPR003181"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:D2D3N9"
FT                   /protein_id="ACS12881.1"
FT                   /translation="ASTTQSLLNKFANTRQMEGTPIETKFARTKIILTKVMAGGNILYT
FT                   ERLSDVLSNVEQRAAIAFQRTHVQHKKLVALATINVPENTGCALMMCYNSGIRGKAVVD
FT                   AYTASAEASTIWNPACQQQARLEINVNPCKSAWSYQFLRQSKGVFNVVCISGWTTTPST
FT                   DLSLTIDWYLSDKDAEPETYCAVGINPKIVLNRWMGKLSFPQGTDVTLRRMPLAIGGGA
FT                   GGTGLVYMNMPNALCSLWRYMRGGMSFEVIKLSSPYIKATIAFFIAFTDVDATVPNLEA
FT                   YPHKLVQFSEIQERVNISFDKEDFVMAWSTQVHNSVPLSEDGCPYLYAVVHDSVGSTIP
FT                   GDFNIGVVLKEMNEVESIGRHPGWKGARPLAVSPQ"
XX
SQ   Sequence 1125 BP; 317 A; 235 C; 272 G; 301 T; 0 other;
     gcgagcacca ctcaatcatt gttaaacaaa ttcgccaata cacggcagat ggaaggaaca        60
     ccaattgaga ctaagtttgc tagaactaag ataatcttga ctaaggttat ggctggtggt       120
     aatatcttgt acactgagcg cctaagtgat gttctttcca acgttgaaca acgagctgct       180
     attgcttttc agcggacgca tgtccaacat aagaaactcg tagcgctggc cactatcaat       240
     gtgcctgaaa acactgggtg cgctctgatg atgtgctaca atagcggtat tcgaggtaaa       300
     gcagttgttg acgcttatac agcctcagct gaagctagta ccatatggaa tccggcgtgt       360
     caacaacaag cgcgtttaga gataaatgtg aatccgtgta agagtgcctg gagttatcaa       420
     tttctacgac agtctaaagg agtgttcaac gtagtttgca tatcaggctg gaccacaaca       480
     ccatcgacag acctttcact cacaatagat tggtatctta gtgataagga tgcagaacca       540
     gaaacatatt gtgctgttgg aatcaatccc aagattgttc tcaatcgctg gatgggaaag       600
     ctttcctttc cgcaaggtac agatgttacg ctacgtagaa tgccacttgc tataggtggg       660
     ggtgccggag gaacaggact ggtatacatg aatatgccca atgctttgtg ctctctgtgg       720
     agatatatgc gcggtggaat gtcctttgaa gtcattaaat tgagttctcc ctacattaag       780
     gccaccatag cgttttttat tgcgttcaca gacgttgatg ccacagtccc aaatctagaa       840
     gcctatcccc acaagttggt ccagttttcg gaaatacaag agagggttaa catatccttt       900
     gataaggaag atttcgtgat ggcctggtcc acacaagtgc acaatagcgt tcctctgtcc       960
     gaagatggtt gtccttattt gtatgccgtg gttcatgaca gtgttggctc gacaatacct      1020
     ggagatttca atattggagt agtgctcaaa gaaatgaatg aggttgaatc cataggaaga      1080
     catcctggct ggaaaggagc gcgaccactg gctgtgagtc cacag                      1125
//