ID FJ439569; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC FJ439569; XX DT 16-DEC-2008 (Rel. 98, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Tomato yellow leaf curl virus from Netherlands, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RX DOI; 10.1094/PDIS-93-10-1073C. RX AGRICOLA; IND44294767. RA Botermans M., Verhoeven J.T.J., Jansen C.C.C., Roenhorst J.W., RA Stijger C.C.M.M., Pham K.T.K.; RT "First Report of Tomato yellow leaf curl virus in Tomato in the RT Netherlands"; RL Plant Dis. 93(10):1073-1073(2009). XX RN [2] RP 1-2781 RA Jansen C.C.C.; RT ; RL Submitted (06-NOV-2008) to the INSDC. RL Netherlands National Reference Laboratory, Plant Protection Service, PO Box RL 9102, Wageningen 6700 HC, Netherlands XX DR MD5; 78fe2d017dc0316e95085b27afec6d11. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="3181291" FT /mol_type="genomic DNA" FT /country="Netherlands" FT /collection_date="25-Sep-2008" FT /db_xref="taxon:10832" FT gene 155..505 FT /gene="V2" FT CDS 155..505 FT /codon_start=1 FT /gene="V2" FT /product="movement protein" FT /db_xref="GOA:B7U6M2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B7U6M2" FT /protein_id="ACJ64207.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT QKAQNIQNVSKP" FT gene 315..1091 FT /gene="V1" FT CDS 315..1091 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q6PMS6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q6PMS6" FT /protein_id="ACJ64208.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFKINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1088..1492) FT /gene="C3" FT CDS complement(1088..1492) FT /codon_start=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:B7U6M4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B7U6M4" FT /protein_id="ACJ64209.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSKRPFLMNHDI FT ISIQIRFNHNIRKVMGIHKCFLNFRIWTTLQPQTGHFLRVFRYEVVKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1233..1640) FT /gene="C2" FT CDS complement(1233..1640) FT /codon_start=1 FT /gene="C2" FT /product="transcriptional activator protein" FT /db_xref="GOA:B7U6M5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B7U6M5" FT /protein_id="ACJ64210.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQQAAISNEPRHHFHSDKIQPQ FT HQEGNGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1549..2622) FT /gene="C1" FT CDS complement(1549..2622) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:B7U6M6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B7U6M6" FT /protein_id="ACJ64211.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLQNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGNKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFITLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2178..2471) FT /gene="C4" FT CDS complement(2178..2471) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:A1KQR1" FT /protein_id="ACJ64212.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTDQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPKHSIQAINPRPSIY" XX SQ Sequence 2781 BP; 761 A; 532 C; 605 G; 883 T; 0 other; taatattacc ggagggccgc gccttttcct tttttgtggt ccccacgagg gttccacaga 60 cgtcactgtc aaccaatcaa attgcgtact caaacgttat ataagtgttc atttgtcttt 120 atatacttgg tccccaagta ttttgtcttg caatatgtgg gacccacttc taaatgaatt 180 tcctgaatct gttcacggat ttcgttgtat gttagctatt aaatatttgc agtccgttga 240 ggaaacttac gagcccaata cattgggcca cgatttaatt agggatctta tatctgttgt 300 aagggcccgt gactatgtcg aagcgaccag gcgatataat catttccacg cccgtctcga 360 aggttcgccg aaggctgaac ttcgacagcc catacagcag ccgtgctgct gtccccattg 420 tccaaggcac aaacaagcga cgatcatgga cgtacaggcc catgtacaga aagcccagaa 480 tatacagaat gtatcgaagc cctgatgttc cccgtggatg tgaaggccca tgtaaagtcc 540 agtcttatga gcaacgggat gatattaagc atactggtat tgttcgttgt gttagtgatg 600 ttactcgtgg atctggaatt actcacagag tgggtaagag gttctgtgtt aaatcgatat 660 attttttagg taaagtctgg atggatgaaa atatcaagaa gcagaatcac actaatcagg 720 tcatgttctt tttggtccgt gatagaaggc cctatggaag cagcccaatg gattttggac 780 aggtttttaa tatgttcgat aatgagccca gtaccgcaac cgtgaagaat gatttgcgtg 840 ataggtttca agtgatgaga aaatttcatg caacagttat tggtgggcct tctggaatga 900 aggaacaggc attagttaag agatttttta aaattaacag tcatgtaact tataatcatc 960 aggaggcagc caagtacgag aaccatactg aaaacgcctt gttattgtat atggcatgta 1020 cgcatgcctc taatccagtg tatgcaacta tgaaaatacg catctatttc tatgattcaa 1080 tatcaaatta ataaaattta tattttatat catgagtttc tgttacattt attgtgtttt 1140 caagtacatc atacaataca tgatcaactg ctctgattac attgttaatg gaaattacac 1200 caagactatc taaatactta acaacttcat atctaaatac tcttaagaaa tgaccagtct 1260 gaggctgtaa tgtcgtccaa attcggaagt tgagaaaaca tttgtgaatc cccattacct 1320 tcctgatgtt gtggttgaat cttatctgaa tggaaatgat gtcgtggttc attagaaatg 1380 gccgcttgct gtgttctgtt atcttgaaat agaggggatt gtttatctcc caaataaaaa 1440 cgccattctc tgcctgagga gcagtgatga gttcccctgt gcgtgaatcc atgattgttg 1500 cagttgaggt ggaggtagta tgagcagcca cagtctaggt ctacacgctt acgccttatt 1560 ggtttcttct tggctatctt gtgttggacc ttgattgata cttgcgaaca gtggctcgta 1620 gagggtgatg aaggttgcat tcttgagcgc ccaatttttc aaggatatat ttttttcttc 1680 gtctagatat tccctatatg aggaggtagg tcctggattg cagaggaaga tagtgggaat 1740 tcccccttta atttgaatgg gcttcccgta ctttgtgttg ctttgccagt ccctctgggc 1800 ccccatgaat tccttgaagt gctttaaata atgcgggtct acgtcatcaa tgacgttgta 1860 ccacgcatca ttactgtaca cctttgggct taggtctaga tgtccacata aatagttatg 1920 tgggcctaga gacctggccc acattgtttt gcctgttctg ctatcaccct caattacaat 1980 acttatgggt ctccatggcc gcgcagcgga agacacgacg ttctcagcga cccactcttc 2040 aagttcatct ggaacttgat taaaagaaga agaaagaaat ggagaaacat aaacttctaa 2100 aggaggacta aaaatcctat ctaaatttga acttaaatta tgaaattgta aaatatagtc 2160 ctttggggcc ttctctttta atatattgag ggcctcggat ttattgcctg aattgagtgc 2220 ttcggcatat gcgtcgttgg cagattgctg acctcctcta gctgatctgc catcgatttg 2280 gaaaactcca aaatcaatga agtctccgtc tttctccacg taggtcttga catctgttga 2340 gctcttagct gcctgaatgt tcggatggaa atgtgctgat ctgtttgggg ataccaggtc 2400 gaagaaccgt tggttcttac attggtattt gccttcgaat tggataagca catggagatg 2460 tggttcccca ttctcgtgga gttctctgca aactttgatg tattttttat ttgttggggt 2520 ttctagattt tgtaattggg aaagtgcttc ctctttagag agagaacaat tgggatatgt 2580 taggaaataa tttttggcat atattttaaa taaacgaggc atgttgaaat gaatcggtgt 2640 ccctcaaagc tctatggcaa tcggtgtatc ggtgtcttat atatacctgg acacctaatg 2700 gctatttggt aatttcgtaa aagtacattg caatttaaaa ttcaaaattc aaaaatcaaa 2760 tcattaaagc ggccatccgt a 2781 //