Dbfetch
ID FJ430661; SV 1; linear; genomic RNA; STD; VRL; 613 BP. XX AC FJ430661; XX DT 16-DEC-2008 (Rel. 98, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE Sugarcane yellow leaf virus isolate KER-IND-1 aphid transmission factor DE gene, partial cds; and coat protein and movement protein genes, complete DE cds. XX KW . XX OS Sugarcane yellow leaf virus OC Viruses; Riboviria; Luteoviridae; Polerovirus. XX RN [1] RP 1-613 RA Singh D., Rao G.P., Snehi S.K., Raj S.K., Viswanathan R.; RT "Sugarcane yellow leaf virus isolate associated with leaf yellowing and RT bright yellow midrib symptoms of sugarcane (Saccharum spp. hybrid) in RT India"; RL Unpublished. XX RN [2] RP 1-613 RA Singh D., Rao G.P., Snehi S.K., Raj S.K., Viswanathan R.; RT ; RL Submitted (31-OCT-2008) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U. P. 226001, India XX DR MD5; 0dae02c187998ff3068fcf0a8ca4556d. XX FH Key Location/Qualifiers FH FT source 1..613 FT /organism="Sugarcane yellow leaf virus" FT /host="Saccharum hybrid cv. Co 7219" FT /isolate="KER-IND-1" FT /mol_type="genomic RNA" FT /country="India" FT /collection_date="Feb-2008" FT /db_xref="taxon:94290" FT CDS 1..>613 FT /codon_start=1 FT /transl_except=(pos:589..591,aa:OTHER) FT /product="aphid transmission factor" FT /note="readthrough protein" FT /db_xref="GOA:B7U4K4" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B7U4K4" FT /protein_id="ACJ61713.1" FT /translation="MNTGANRPRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG FT GNAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL FT TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKRTYPAPFIRGKDFMTT FT SADQFWLLYKGNGDGSLARQFVCRFECLFQNLKXVGDAPPT" FT CDS 1..591 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B7U4K5" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B7U4K5" FT /protein_id="ACJ61711.1" FT /translation="MNTGANRPRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG FT GNAVRGPGGRSNRDVLTFTIDDLKANSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL FT TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKRTYPAPFIRGKDFMTT FT SADQFWLLYKGNGDGSLARQFVCRFECLFQNLK" FT CDS 32..484 FT /codon_start=1 FT /product="movement protein" FT /db_xref="InterPro:IPR001964" FT /db_xref="UniProtKB/TrEMBL:B7U4K6" FT /protein_id="ACJ61712.1" FT /translation="MSEDALTVVDRLGQWSWSGLPQDLDEYDDVEHVLEETLCEDREEE FT ATGMFSLSRLTISRPTQPGSSNSDRTYLSTQRSTMAYSKPTMSIKSQVSQFSITHAPPT FT QLQVQSHLKWIHPAPKQQQAPRLLASPSRGTPREPTRPPSSGGKTS" XX SQ Sequence 613 BP; 176 A; 171 C; 146 G; 120 T; 0 other; atgaatacgg gcgctaaccg tccacgaagg aatgtcagaa gacgcgctaa ccgtcgtcga 60 cagactcggc cagtggtcgt ggtccggcct gccgcaggac ctagacgagt acgacgacgt 120 agagcacgtg ttggaggaaa cgctgtgcga ggaccgggag gaagaagcaa cagggatgtt 180 ctcactttca cgattgacga tctcaaggcc aactcaaccg ggatcctcaa attcggaccg 240 aacctatctc agtacgcagc gttcaacaat ggcttactca aagcctacca tgagtataaa 300 atcacaagtc tcacaattca gtataactca tgctcctccg acgcaactcc aggtgcaatc 360 gcacttgaag tggatacatc ctgctcccaa acaacaacag gctccaagat tactagcttc 420 cccgtcaaga ggaacgccaa gagaacctac ccggccccct tcatcagggg gaaagacttc 480 atgactacat cagctgatca gttttggctt ttgtacaaag ggaatggaga cggaagccta 540 gcacgacaat tcgtctgccg atttgaatgt ctattccaga atctcaaata ggtaggcgac 600 gctcccccaa cac 613 //