ID   FJ424610; SV 2; linear; genomic RNA; STD; VRL; 1730 BP.
XX
AC   FJ424610;
XX
DT   16-DEC-2008 (Rel. 98, Created)
DT   10-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Beet soil-borne mosaic virus isolate MRM06 segment RNA4, complete sequence.
XX
KW   .
XX
OS   Beet soil-borne mosaic virus
OC   Viruses; Riboviria; Benyviridae; Benyvirus.
XX
RN   [1]
RP   1-1730
RA   D'Alonzo M., Bianchi L., Rubies Autonell C., Gilmer D., Ratti C.;
RT   "New Beet soil-borne mosaic virus RNA-4 form isolated from infected sugar
RT   beet roots";
RL   Unpublished.
XX
RN   [2]
RP   1-1730
RA   D'Alonzo M., Bianchi L., Rubies Autonell C., Gilmer D., Ratti C.;
RT   ;
RL   Submitted (28-OCT-2008) to the INSDC.
RL   DiSTA, Plant Pathology, Via G. Fanin, 40, Bologna, BO 40127, Italy
XX
RN   [3]
RC   Sequence update by submitter
RP   1-1730
RA   D'Alonzo M., Lanzoni C., Delbianco A., Rubies Autonell C., Gilmer D.,
RA   Ratti C.;
RT   ;
RL   Submitted (09-MAR-2011) to the INSDC.
RL   DiSTA, Plant Pathology, Via G. Fanin, 40, Bologna, BO 40127, Italy
XX
DR   MD5; dd1df7a968c0079eb1728fe9aaf561de.
DR   EuropePMC; PMC4078943; 24961274.
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CC   On Mar 9, 2011 this sequence version replaced gi:213990198.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1730
FT                   /organism="Beet soil-borne mosaic virus"
FT                   /segment="RNA4"
FT                   /host="Beta vulgaris"
FT                   /isolate="MRM06"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="host plant grown in infected soil in
FT                   greenhouse"
FT                   /collection_date="2006"
FT                   /note="acronym: BSBMV"
FT                   /db_xref="taxon:76343"
FT   CDS             383..1234
FT                   /codon_start=1
FT                   /product="32 kDa protein"
FT                   /note="p32; viral transmission protein"
FT                   /db_xref="InterPro:IPR007004"
FT                   /db_xref="UniProtKB/TrEMBL:B7U2G1"
FT                   /protein_id="ACJ60504.2"
FT                   /translation="MADVEICRCQDSQEPLLNVTGYDLTSRVMFERIDIGPLGVLCNIG
FT                   VLFHMSVIRRRDIFPWLNKITSINVSVDVPVSSVSRVGQCRVVVFTCDRVGAFHVWQVI
FT                   PGCFIGAPCYNGVNVVHDELVDVAIDNELAVFSCVFSRAYDPMDLRILFLYSEDCYGWS
FT                   DVTIDVDQYTLPSNENGCAYCSGICFYSDPRRYCGRPFRDPSTPPCFRFIMVNDELFNN
FT                   VATQRFVRGLVGADGFEQDNRTISKNGWRRFCYNLWCHDYGDVIHCTLARYMLFCFEQD
FT                   FQ"
FT   CDS             885..1244
FT                   /codon_start=1
FT                   /product="ORF2"
FT                   /note="putative 13 kDa protein"
FT                   /db_xref="GOA:B7U2G2"
FT                   /db_xref="UniProtKB/TrEMBL:B7U2G2"
FT                   /protein_id="ACJ60505.2"
FT                   /translation="MWISIPFPLMRMVVLIALVSAFIVTPGAIAVVLFVIHQHLLVFVL
FT                   LWSTTNCLITWPLNDLCVVWLEPMALNKIIAPFLRMVGGAFATICGVTIMVMLYIVRWR
FT                   GICCFVSNKIFSDYL"
FT   misc_feature    1304..1323
FT                   /note="coramin region"
XX
SQ   Sequence 1730 BP; 381 A; 281 C; 412 G; 656 T; 0 other;
     aaattcaaaa ctcaaaaata taattttgta tttccagttg attatctgta aaataatctc        60
     ggttaactag ttgtccgatt aacaactcga gtctgatctg cttaaagatc cccaatatta       120
     ttatcaatat tattatcaat tttaacgtgt cgctactcat ctactgttgt tgattgtggt       180
     tggtagtcat tggaaaggtg cctgtgcttg gtgttgcatt gatcagtcgg tttgtggttg       240
     cagaaagcta cttaggtgag gctaaggccg tgttcggaac cttagattca cgagccgcgt       300
     gattaatcgg gtttgtcact gggatccggt ctatcagtaa gagctattcc tttgttaata       360
     ccctttttgg ttagtaacaa ttatggccga tgtggagatt tgccgatgtc aggatagtca       420
     ggaacctttg cttaatgtta ccggatatga tcttacttct cgtgtgatgt ttgagcgaat       480
     tgatattggc cccttagggg tgttgtgcaa tatcggtgtg ctatttcata tgtccgtgat       540
     tcgtcgtcgt gatatttttc cttggcttaa caagattacg tctattaatg tttctgttga       600
     tgtgccagtt agtagtgttt cgcgtgttgg tcagtgtcgg gttgttgttt ttacatgtga       660
     tagagttggt gctttccatg tttggcaagt gatccctgga tgtttcattg gtgcaccatg       720
     ttataatggt gttaatgttg tccacgatga acttgttgac gtggctattg ataacgaatt       780
     ggctgttttt agctgtgttt tctctcgagc ctatgatccg atggatttaa ggattttgtt       840
     cctgtattcg gaagattgtt atggttggag tgatgtcact atagatgtgg atcagtatac       900
     ccttccctct aatgagaatg gttgtgctta ttgctctggt atctgctttt atagtgaccc       960
     ccggcgctat tgcggtcgtc cttttcgtga tccatcaaca cctccttgtt ttcgttttat      1020
     tatggtcaac gacgaattgt ttaataacgt ggccactcaa cgatttgtgc gtggtttggt      1080
     tggagccgat ggctttgaac aagataatcg caccatttct aagaatggtt ggcggcgctt      1140
     ttgctacaat ttgtggtgtc acgattatgg tgatgttata cattgtacgc tggcgcggta      1200
     tatgttgttt tgtttcgaac aagattttca gtgattattt gtgattgtta gtccgatgat      1260
     gttgttttac ttatcgtacg aatatttgtg tatgatagtg tatgtccgaa gacgttaaac      1320
     tacatgtagt gataactgta actatatgtt tgtgatcagt tcgattggtg tgttcctcgc      1380
     atattaatcg tattttgagg gtggtaagta aaatagtgtg tggttttccc gactcttggt      1440
     gttgaaccga gtgatccttg gaaacatcct ttcgtctcac aaacgtgtat ggcgtgtttc      1500
     ctgcttacct gggtttctac tatgagccct tatatttcaa aatataagaa tacatagttg      1560
     tttaacaggc ttgtttgcaa gcctcccatt ggggttatgc agacacaaaa agatggctta      1620
     ttggttatgc taaacctcat atctttgtat ttgtgtggtt tgtttggttg tattgtactg      1680
     actgggtgtg aaatgtacca gtccttgtag ggtgtatttt cagtttattg                 1730
//