ID   FJ417083; SV 1; linear; genomic RNA; STD; VRL; 2217 BP.
XX
AC   FJ417083;
XX
DT   16-DEC-2008 (Rel. 98, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 1)
XX
DE   Tobacco streak virus isolate TSVAPMG segment RNA3, complete sequence.
XX
KW   .
XX
OS   Tobacco streak virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2217
RA   Sarovar B., Sai Gopal D.V.R.;
RT   "Tobacco streak Ilarvirus RNA3 complete sequence";
RL   Unpublished.
XX
RN   [2]
RP   1-2217
RA   Sarovar B., Sai Gopal D.V.R.;
RT   ;
RL   Submitted (27-OCT-2008) to the INSDC.
RL   Department of Virology, Sri Venkateswara University, Tirupati, Andhra
RL   Pradesh 517502, India
XX
DR   MD5; 0ee28ee6891f92a7568dbf6dbde91e52.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2217
FT                   /organism="Tobacco streak virus"
FT                   /segment="RNA3"
FT                   /host="marigold"
FT                   /isolate="TSVAPMG"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Tirupati"
FT                   /collection_date="Mar-2008"
FT                   /db_xref="taxon:12317"
FT   5'UTR           1..212
FT   gene            213..1088
FT                   /gene="MP"
FT   CDS             213..1088
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="GOA:B7TYP9"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:B7TYP9"
FT                   /protein_id="ACJ46452.1"
FT                   /translation="MALVPTMKALTFSADDETSLEKAITEALFGSVELNMGLRRCAAFP
FT                   AVNTGAFLCELTTKETKSFIGKFSDKVRGRTFVDHAVIHLLYLPVILKTTYAISELKLK
FT                   NLATGDELYGGTKVDLSKAFILTMTWPRSLFAEAVHAHRGLYLGGGLFPALPQCLQTPK
FT                   LGMWYPMWSEKVSNKQLYQNTVNIHSTEALETFTRTMISSDREMRSLLRSRASIDIAAK
FT                   TPEKPVICSERVSLLDQHTQGVDFTVNEIDADKDDDAGTSVLGPKMVPIEQVPSVKLPS
FT                   SKAGRNLLSA"
FT   gene            1212..1928
FT                   /gene="CP"
FT   CDS             1212..1928
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B7TYP8"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:B7TYP8"
FT                   /protein_id="ACJ46453.1"
FT                   /translation="MNNLIQSPDHPSNAMSSRTNNRFNNNSRCPTCFDELDAVARGCPA
FT                   HAPANTVSRRQRRNAARAAAFRNANARMTAPIPVVPVSRPQAKTSLKLPNNQVWVTRKA
FT                   SEWSAKTIDTNDAIPFKTIVEGIPEINSETRFYRLLIGFVAVSDGTFGMVDGVTGDVIP
FT                   DPPVVGRLGFKKNTYRSRDFDLGGKLLNQLDDRAIVWCLDERRRDAKRVQLAGYWIAIS
FT                   KPAPLMPPEDFLVNQD"
FT   3'UTR           1929..2217
XX
SQ   Sequence 2217 BP; 582 A; 497 C; 554 G; 584 T; 0 other;
     gaattctccg agcttatgat accatttgca ttttgattcc gaatcggacg atttccaact        60
     ttgaattcct cacaagttga gaccattggt cgatcaaatt gcttgtcatt cgaatacaac       120
     tgatatcaca gaggatcttc tgggtaaagt tatcccgata actcagttgc tgttcgggtt       180
     gtgtatatca ggatccgcca ctgaaaagga agatggcgtt agtaccaacg atgaaagctt       240
     tgacattctc agcagatgat gagacatctc tggagaaggc tataacagaa gcactatttg       300
     gttccgttga gttaaacatg ggtttacgtc gttgcgcagc tttccctgct gttaacacag       360
     gtgccttcct gtgtgagttg actaccaaag agacgaaatc ctttatcggt aaattttccg       420
     ataaagttag aggacgtacc tttgtagatc acgcggtgat acatttgttg tatttacctg       480
     tgatattaaa aaccacttat gccatctcgg agcttaaatt gaaaaattta gctacaggtg       540
     atgaattgta tggtggtact aaagtcgacc tgagcaaagc cttcatatta actatgactt       600
     ggcctcgctc tctatttgct gaagcagttc atgcccacag aggattgtac ctgggggggg       660
     gactgtttcc tgcgcttcct cagtgccttc aaacgccaaa attggggatg tggtacccca       720
     tgtggtcgga aaaggtttcg aataaacaac tgtatcaaaa tacagttaat attcatagta       780
     ccgaagcact tgagacgttt acgcggacga tgatcagcag tgacagggaa atgagatcgt       840
     tattgagaag tcgtgcctca attgatattg ctgcaaaaac acctgaaaaa cccgtgatat       900
     gctcggaacg agttagtctg ctggatcagc acactcaggg agtcgacttc actgtgaatg       960
     aaatcgatgc cgataaggac gatgacgcag gaacgtcagt cttaggaccg aagatggtcc      1020
     cgattgaaca agtaccgtcg gtcaagcttc cgtcgtcgaa agcaggtagg aacctgcttt      1080
     cagcctgact gttgggttgt gtaagacatg gggggctttg agtaaagggg ctagtccccc      1140
     agtgtgagac gagtattaag ttgatgaatt ctagagatag ataagtcgct tctcggactt      1200
     acctgggatg tatgaataat ttgatacaaa gtccagacca tccatccaac gccatgtctt      1260
     cccgtactaa caaccgcttt aacaacaaca gcagatgccc aacttgtttc gacgagttgg      1320
     atgcagtagc gaggggttgc cccgctcacg ctcccgcgaa cactgtttcg cgacgtcagc      1380
     ggcgaaatgc cgctagagct gccgcgttta ggaacgcgaa tgctcgaatg accgcaccaa      1440
     ttcctgtggt gccggtttcc cgccctcaag cgaagacatc gttgaagcta cccaacaatc      1500
     aagtttgggt aactcgcaaa gcgagtgaat ggtctgcaaa gaccattgat accaacgatg      1560
     ctatcccctt caagaccata gtcgagggga ttcccgaaat caattcggag acgaggtttt      1620
     accgtctcct aattggtttt gtcgccgtct ctgatgggac gtttgggatg gttgatggag      1680
     tgacgggaga tgtcattccg gacccaccgg tcgttggacg gttgggtttc aagaagaata      1740
     cctaccgcag ccgagacttt gatctcggcg gtaagcttct caaccaacta gacgatagag      1800
     ctatcgtctg gtgcctcgac gaaaggcgtc gagatgccaa gagggttcag ctggcggggt      1860
     attggattgc catatccaaa ccagctccct tgatgccacc agaagatttc ctggtgaatc      1920
     aagattgact agatggtcac ctcggtagga ccgagttgcc gtacattaga ggtaattcct      1980
     gtgtacgatg tgggtttaca ccaccacgta ttgtagatca atacgtttgg tcgtgtaact      2040
     tttgttccta tgaacaacat gcatagctgc cgcgcatccg ggcgtgagtc tatgacccat      2100
     gcgagcattc cgaatcggac gatttccgtg gaaaaccacg agaccttaag gtcgatgctt      2160
     gcgtttggtg ccagtagtat atatatatac tactgatgcc tcctttatac cagatgc         2217
//