ID   FJ417082; SV 1; linear; genomic RNA; STD; VRL; 2214 BP.
XX
AC   FJ417082;
XX
DT   16-DEC-2008 (Rel. 98, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 1)
XX
DE   Tobacco streak virus isolate TSVAPGA segment RNA3, complete sequence.
XX
KW   .
XX
OS   Tobacco streak virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2214
RA   Sarovar B., Sai Gopal D.V.R.;
RT   "Tobacco streak Ilarvirus RNA3 complete sequence";
RL   Unpublished.
XX
RN   [2]
RP   1-2214
RA   Sarovar B., Sai Gopal D.V.R.;
RT   ;
RL   Submitted (27-OCT-2008) to the INSDC.
RL   Department of Virology, Sri Venkateswara University, Tirupati, Andhra
RL   Pradesh 517502, India
XX
DR   MD5; 879b19e338e4dd8dffa651f87f754264.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Tobacco streak virus"
FT                   /segment="RNA3"
FT                   /host="globe amaranth"
FT                   /isolate="TSVAPGA"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Tirupati"
FT                   /collection_date="Mar-2008"
FT                   /db_xref="taxon:12317"
FT   5'UTR           1..212
FT   gene            213..1085
FT                   /gene="MP"
FT   CDS             213..1085
FT                   /codon_start=1
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="GOA:B7TYP7"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:B7TYP7"
FT                   /protein_id="ACJ46450.1"
FT                   /translation="MALVPTMKALTFSADDETSLEKAITEALSGSVELNMGLRRCAAFP
FT                   AVNTGAFLCELTTKETKSFIGKFSDKVRGRTFVDHAVIHLLYLPVILKTTYAISELKLK
FT                   NLATGDELYGGTKVDLSKAFILTMTWPRSLFAEAVHAHRGLYLGGTVSCASSVPSNAKI
FT                   GMWYPMWSEKVSNKQLYQNTVNIHSTEALETFTRTMISSDREMRSLLRSRASIDIAAKT
FT                   PEKPVICSERVSLLDQHTQGVDFTVNEIDADKDDDAGTSVLGPKMVPIEQVPSVKLPSS
FT                   KAGRNLLSA"
FT   gene            1209..1926
FT                   /gene="CP"
FT   CDS             1209..1925
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B7TYP8"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:B7TYP8"
FT                   /protein_id="ACJ46451.1"
FT                   /translation="MNNLIQSPDHPSNAMSSRTNNRFNNNSRCPTCFDELDAVARGCPA
FT                   HAPANTVSRRQRRNAARAAAFRNANARMTAPIPVVPVSRPQAKTSLKLPNNQVWVTRKA
FT                   SEWSAKTIDTNDAIPFKTIVEGIPEINSETRFYRLLIGFVAVSDGTFGMVDGVTGDVIP
FT                   DPPVVGRLGFKKNTYRSRDFDLGGKLLNQLDDRAIVWCLDERRRDAKRVQLAGYWIAIS
FT                   KPAPLMPPEDFLVNQD"
FT   3'UTR           1926..2214
XX
SQ   Sequence 2214 BP; 584 A; 500 C; 550 G; 580 T; 0 other;
     gaattctccg agcttatgat accacttgca atttgattcc gaatcggacg atttccaact        60
     ttgaattcct cacaagttga gaccattggt cgatcaaatc gcttgtcatt cgaatacaac       120
     tgatatcaca gaggatcttc tgggtaaagt tatcccgata actcagttgc tgttcgggtt       180
     gtgtatatca ggatccgcca ctgaaaagga agatggcgtt agtaccaacg atgaaagctt       240
     tgacattctc agcagatgat gagacatctc tggagaaggc tataacagaa gcactatctg       300
     gttccgttga gttaaacatg ggtttacgtc gttgcgcagc tttccctgct gttaacacag       360
     gtgccttcct gtgtgagttg actaccaaag agacgaaatc ctttatcggt aaattttccg       420
     ataaagttag aggacgtacc tttgtagatc acgcggtgat acatttgttg tatttacctg       480
     tgatattaaa aaccacttat gccatctcgg agcttaaatt gaaaaattta gctacaggtg       540
     atgaattgta tggtggtact aaagtcgacc tgagcaaagc cttcatatta actatgactt       600
     ggcctcgctc tctatttgct gaagcagttc atgcccacag aggattgtac ctggggggaa       660
     ctgtttcctg cgcttcctca gtgccttcaa acgccaaaat tgggatgtgg taccccatgt       720
     ggtcggaaaa ggtttcgaat aaacaactgt atcaaaatac agttaatatt catagtaccg       780
     aagcacttga gacgtttacg cggacgatga tcagcagtga cagggaaatg agatcgttat       840
     tgagaagtcg tgcctcaatt gatattgctg caaaaacacc tgaaaaaccc gtgatatgct       900
     cggaacgagt tagtctgctg gatcagcaca ctcagggagt cgacttcact gtgaatgaaa       960
     tcgatgccga taaggacgat gacgcaggaa cgtcagtctt aggaccgaag atggtcccga      1020
     ttgaacaagt accgtcggtc aagcttccgt cgtcgaaagc aggtaggaac ctgctttcag      1080
     cctgactgtt gggttgtgta agacatgggg ggctttgagt aaaggggcta gtcccccagt      1140
     gtgagacgag tattaagttg atgaattcta gagatagata agtcgcttct cggacttacc      1200
     tgggatgtat gaataatttg atacaaagtc cagaccatcc atccaacgcc atgtcttccc      1260
     gtactaacaa ccgctttaac aacaacagca gatgcccaac ttgtttcgac gagttggatg      1320
     cagtagcgag gggttgcccc gctcacgctc ccgcgaacac tgtttcgcga cgtcagcggc      1380
     gaaatgccgc tagagctgcc gcgtttagga acgcgaatgc tcgaatgacc gcaccaattc      1440
     ctgtggtgcc ggtttcccgc cctcaagcga agacatcgtt gaagctaccc aacaatcaag      1500
     tttgggtaac tcgcaaagcg agtgaatggt ctgcaaagac cattgatacc aacgatgcta      1560
     tccccttcaa gaccatagtc gaggggattc ccgaaatcaa ttcggagacg aggttttacc      1620
     gtctcctaat tggttttgtc gccgtctctg atgggacgtt tgggatggtt gatggagtga      1680
     cgggagatgt cattccggac ccaccggtcg ttggacggtt gggtttcaag aagaatacct      1740
     accgcagccg agactttgat ctcggcggta agcttctcaa ccaactagac gatagagcta      1800
     tcgtctggtg cctcgacgaa aggcgtcgag atgccaagag ggttcagctg gcggggtatt      1860
     ggattgccat atccaaacca gctcccttga tgccaccaga agatttcctg gtgaatcaag      1920
     attgactaga tggtcacctc ggtaggaccg agttgccgta cattagaggt aattcctgtg      1980
     tacgatgtgg gtttacacca ccacgtattg tagatcaata cgtttggtcg tgtaactttt      2040
     gttcctatga acaacatgca tagctgccgc gcatccgggc gtgagtctat gacccatgcg      2100
     agcattccga atcggacgat ttccgtggaa aaccacgaga ccttaaggtc gatgcttgcg      2160
     tttggtgcca gtagtatata tatatactac tgatgcctcc tttataccag atgc            2214
//