ID   FJ407052; SV 1; linear; genomic DNA; STD; VRL; 2609 BP.
XX
AC   FJ407052;
XX
DT   16-DEC-2008 (Rel. 98, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 1)
XX
DE   Euphorbia mosaic virus - [Jamaica:Wissadula:Euphorbia:2004] segment DNA-A,
DE   complete sequence.
XX
KW   .
XX
OS   Euphorbia mosaic virus - [Jamaica:Wissadula:Euphorbia:2004]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2609
RA   Collins A.M., Roye M.E.;
RT   "Wissadula amplissima is a host of multiple begomoviruses in Jamaica";
RL   Unpublished.
XX
RN   [2]
RP   1-2609
RA   Collins A.M., Roye M.E.;
RT   ;
RL   Submitted (21-OCT-2008) to the INSDC.
RL   Biotechnology, University of the West Indies, Mona Campus, 2 St John's
RL   Close, Mona, Jamaica
XX
DR   MD5; 5551281418209ff146ee659a40a03561.
DR   EuropePMC; PMC2974675; 20958988.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2609
FT                   /organism="Euphorbia mosaic virus -
FT                   [Jamaica:Wissadula:Euphorbia:2004]"
FT                   /segment="DNA-A"
FT                   /host="Euphorbia heterophylla"
FT                   /mol_type="genomic DNA"
FT                   /country="Jamaica"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:573904"
FT   CDS             198..953
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:B7TXX7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:B7TXX7"
FT                   /protein_id="ACJ26057.1"
FT                   /translation="MVKRDAPWRLSAGTFKVSRSSNYSPRGGMGPKLDKAAAWVNRPMY
FT                   KKPRIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYYYDSIMN"
FT   CDS             complement(950..1348)
FT                   /codon_start=1
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:B7TXX8"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:B7TXX8"
FT                   /protein_id="ACJ26061.1"
FT                   /translation="MDSRTGESITASQAENSVFIWEVPNPLYFKMCRVEDPPHTWVRIY
FT                   HIQIRFNYNLRKELSLHQAFLNFQVWTTSIRASGTTYLSRFRHLVMLYLDRLGVIGINN
FT                   VIRAVRFATDRSYVNYVLEDHQIKFNIY"
FT   CDS             complement(1089..1484)
FT                   /codon_start=1
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:B7TXX9"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:B7TXX9"
FT                   /protein_id="ACJ26060.1"
FT                   /translation="MLNSSSSTPPSIKPQHRIAKKRAIRRRRIDLNCGCSIYLHINCAD
FT                   NGFTHRGEHHCVSGREFRFYLGGSKSPLFQDVPSRGSTSYMGQNIPHTNQVQLQPQEGA
FT                   ESTPSLPELPSLDDINSSFWDDLFKSL"
FT   CDS             complement(1396..2475)
FT                   /codon_start=1
FT                   /product="replication initiator protein"
FT                   /db_xref="GOA:B7TXY0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:B7TXY0"
FT                   /protein_id="ACJ26058.1"
FT                   /translation="MPRNPNSFRLQARNIFLTYPQCDVPKDEVLQMLQHLPWSIVKPAY
FT                   IRVAREEHRDGFPHLHCLTQLSGKSNIKDARFFDISHPRRSTCFHPNIQGAKDTNAVKN
FT                   YITKDGDYCESGQYKVSGGTKSNKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNL
FT                   RANIERLFKKAADPWVPPFPLSSFVNVPEEMQEWADDYFGRGAAARPERPISLIVEGDS
FT                   RTGKTMWARALGPHNYLSGHLDFNSKVYSNQVEYNVIDDVNPQYLKLKHWKELIGAQRD
FT                   WQSNCKYGKPVQIKGGIPSIVLCNPGEGGSYKYFLDKEENASLRAWTLKNAKFVFLNSP
FT                   LYQATAQDCQEESHTSTTD"
FT   CDS             complement(2031..2408)
FT                   /codon_start=1
FT                   /product="AC4"
FT                   /db_xref="UniProtKB/TrEMBL:B7TXY1"
FT                   /protein_id="ACJ26059.1"
FT                   /translation="MFPKMRFFRCFNICLGQSSNRRISESQERNIAMGSRTYTASHNYL
FT                   ASPTSRMLDFSTYLTPDGQPVFTRTFKEPKTPTPSRITSPRTAIIVNPGNIRCLGEQSR
FT                   IKMTYTTTPSMQQVRERLSTL"
XX
SQ   Sequence 2609 BP; 677 A; 589 C; 615 G; 728 T; 0 other;
     accggatggc cgcgattttt tcggagtccc tcggcccagg cccaaacgca aagctattct        60
     cgtccttata tgggaccacc acaaataatg tatgtccaat catagtgcgt ctgacgagtc       120
     tatataatta tgacttactc accaaggtgt ggtccctata aataaagatg attagtccca       180
     tacctcttta attcaaaatg gttaagaggg atgccccatg gcgactatcg gcggggacct       240
     tcaaggtttc ccgctcttct aactattcgc cgcgtggagg tatgggccct aaattggata       300
     aggccgctgc gtgggttaat aggcccatgt acaagaagcc caggatttat cggacgctca       360
     gagggcccga cgttcccaaa ggctgtgaag gaccttgcaa ggtccagtct tacgagcagc       420
     ggcacgacat cagtcacgtt ggtaaggtga tgtgcatatc tgacgttact cgtggcaacg       480
     gtataacaca tcgtgtaggc aagcgcttct gcgtcaagtc tgtatatatt ttagggaaga       540
     tatggatgga cgagaatatc aagttgaaga accatactaa cagcgttatg ttctggctgg       600
     ttagagatcg tagaccgtat ggtactccta tggattttgg ccaagtgttc aacatgttcg       660
     acaacgagcc tagtacagcc acggtcaaga acgatctccg cgatcggtac caggttatgc       720
     acaagtttta cgctaaggta accggtggac agtacgcgag caacgagcag gcgttggtta       780
     agagattctg gaaggtcaac aaccatgtgg tctacaacca tcaggaagca gggaaatacg       840
     agaatcatac agagaacgcg ttgttattgt atatggcatg tactcatgca tctaaccccg       900
     tgtatgcgac attgaaaatt cggatctatt attatgattc gataatgaat taataaatat       960
     taaattttat ttgatgatct tcgagtacat aatttacata tgaacggtct gttgcgaaac      1020
     gcacagctct aataacatta ttaattccaa tcacaccaag cctatctaag tacaacatta      1080
     ctaaatgtct aaagcgactt aaataagtcg tcccagaagc tcgaattgat gtcgtccaga      1140
     cttggaagtt caggaaggct tggtgtagac tcagctcctt cctgaggttg tagttgaacc      1200
     tgatttgtat gtggtatatt ctgacccatg tatgaggtgg atcctctact cggcacatct      1260
     tgaaatagag gggatttgga acctcccaaa taaaaacgga attctctgcc tgagacgcag      1320
     tgatgctctc ccctgtgcgt gaatccatta tccgcgcagt taatgtggag gtatatggaa      1380
     cagccgcagt tcaagtcaat ccgtcgtcga cgtatggctc tcttcttggc aatcctgtgc      1440
     tgtggcttga tagagggggg agttgaggaa gacgaattta gcatttttta atgtccaagc      1500
     tctcagtgat gcattttcct ctttgtcgag gaaatattta taggaccccc cctctcctgg      1560
     attgcacagc acgattgatg ggataccccc tttaatttga accggctttc catatttaca      1620
     gttggactgc cagtcccttt gggccccaat caattccttc cagtgcttta gctttaggta      1680
     ttgcggattg acatcatcta tgacgttata ctccacttgg ttggagtata ctttggaatt      1740
     gaaatcgaga tgaccgctca gataattatg tgggcctaaa gcacgagccc acattgtctt      1800
     gcctgttcgt gaatcccctt ccactatcaa actaatcggt ctctccggcc gcgcagcggc      1860
     acccctccca aaataatcat ccgcccactc ttgcatctct tccgggacgt taacaaacga      1920
     cgacagtgga aacgggggaa cccatggatc cgcagctttt ttaaagaggc gctcgatgtt      1980
     agcccttaga ttatgataac tgacgataaa cgttttagga tcaccagcct ttataatgtc      2040
     gagagcctct cccgcacttg ctgcattgac ggcgttgtgg tatacgtcat ctttattcga      2100
     ctttgttccc ccagacacct tatattgccc ggattcacaa taatcgccgt ccttggtgat      2160
     gtaattcttg acggcgttgg tgtctttggc tccttgaatg ttcgggtgaa aacaggttga      2220
     ccgtctgggg tgagatatgt cgaaaaatct agcatccttg atgttggact tgccagataa      2280
     ttgtgtgagg cagtgtaagt gcgggaaccc atcgcgatgt tcctctcttg cgactctgat      2340
     atacgccggt ttgacgattg accaaggcag atgttgaagc atctgaagaa cctcatcttt      2400
     gggaacatcg cactgcggat atgttaagaa gatatttctg gcttgtaaac gaaatgaatt      2460
     agggtttcgt ggcatttttg taattatgac ccaggactcc aagggagctc tctcataaaa      2520
     cctattgttg ttggagtcct ggagtcccat ttatacataa agcctctagg actccagagg      2580
     ggcacgtggc ggccatccgc aataatatt                                        2609
//