ID   FJ403377; SV 1; linear; genomic RNA; STD; VRL; 2216 BP.
XX
AC   FJ403377;
XX
DT   16-DEC-2008 (Rel. 98, Created)
DT   16-DEC-2008 (Rel. 98, Last updated, Version 1)
XX
DE   Tobacco streak virus isolate Illinois segment RNA 3, complete sequence.
XX
KW   .
XX
OS   Tobacco streak virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-2216
RA   Jossey S., Ghabrial S.A., Domier L.L.;
RT   "Complete nucleotide sequences of RNAs 1, 2 and 3 of an Illinois soybean
RT   isolate of Tobacco streak virus";
RL   Unpublished.
XX
RN   [2]
RP   1-2216
RA   Jossey S., Hobbs H.A., Ghabrial S.A., Domier L.L.;
RT   ;
RL   Submitted (20-OCT-2008) to the INSDC.
RL   Dept. Crop Sci., University of Illinois, USDA-ARS, 1102 S. Goodwin Ave.,
RL   Urbana, IL 61801, USA
XX
DR   MD5; 46f52827c231ad261856b67a9e6299bb.
DR   EuropePMC; PMC4223465; 25377714.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2216
FT                   /organism="Tobacco streak virus"
FT                   /segment="RNA 3"
FT                   /host="Glycine max (soybean)"
FT                   /isolate="Illinois"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="Aug-2006"
FT                   /db_xref="taxon:12317"
FT   CDS             212..1084
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /db_xref="GOA:B7TX65"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:B7TX65"
FT                   /protein_id="ACJ38090.1"
FT                   /translation="MALVPTMKALTFSAEDETSLEKAITEALSGSVEINMGLRRCAAFP
FT                   AVNTGAFLCELTTKETKSFIGKFSDKVRGRVFVDHAVIHLMYIPVILNTTHAIAELKLK
FT                   NLATGDELYGGTKVNLSKAFILSMTWPRSLFAEAVHAHRGLYLGGTVSCASSVPANAKI
FT                   GMWYPMWSEKVSNKQLYQNTVNIHNTEALETFTRTMISSDREMRSLLRSRASIDIAAKL
FT                   PEKPVICSERVSLLDQHTQGVDFTVTDIESVKDDDAGTSILGPKMVPIEQVPSVELPSS
FT                   KAGRNLLSA"
FT   misc_RNA        1206..2216
FT                   /product="subgenomic RNA"
FT   CDS             1208..1927
FT                   /codon_start=1
FT                   /product="putative coat protein"
FT                   /db_xref="GOA:B7TX66"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:B7TX66"
FT                   /protein_id="ACJ38091.1"
FT                   /translation="MNTLIQSPDHPSNAMSSRTNNRSNNSRCPTCFDELDAMARNCPAH
FT                   NNNPVNAVSRRQRRNAARAAAYRNANARLTVPIPVVPVSRPQAKTSFRLPNNQIWVTRK
FT                   ASEWSSKTVDTNDAIPFKTIVEGITGINDETKFYRLLIGFVAVSDGTFGMVDGVTGDVI
FT                   PDPPVVGRLGFKKNTYRSRDFDLGGKLLNQLDDRAVVWCLDEKRREAKRVQLAGYWIAI
FT                   SKPAPLMPPEDFLVNQD"
XX
SQ   Sequence 2216 BP; 581 A; 499 C; 551 G; 585 T; 0 other;
     gtattctccg agcttaagat accacttgca atttgattcc gaatcggacg atttccgact        60
     ttgaattcct acaagtcgag accattggtc gatcaaattg ctcgtcattt gaatacaact       120
     ggctttacag aggatcttct gaatacagtt atcccgttta actcagttgc tgttcgggct       180
     gtaaagacag gacccgccac tgaattggaa gatggcgtta gtaccaacga tgaaagcttt       240
     gacgttctct gcagaggatg agacttccct tgagaaagct ataaccgaag cactttctgg       300
     ttccgttgag attaacatgg gtttacgacg ttgtgcagct ttccctgctg ttaacacagg       360
     agctttcctg tgtgagttga caaccaaaga aacgaaatcc ttcattggaa aattttctga       420
     taaagttaga ggacgtgtct ttgtagatca cgcggttata catcttatgt acatacccgt       480
     gatattgaac accactcatg ccatcgcaga gctaaagttg aaaaatctag ctaccggtga       540
     tgaactttat ggtggtacaa aagtcaactt gagtaaggcc tttatcttgt caatgacttg       600
     gcctcgctca ttatttgctg aagcagttca tgcccataga gggttatacc taggaggaac       660
     tgtgtcttgc gcttcctcag tgcctgcaaa cgccaaaatt gggatgtggt accccatgtg       720
     gtcggaaaag gtttcgaata aacagctgta tcaaaataca gttaatattc ataataccga       780
     ggcacttgag acgtttacgc ggacaatgat cagcagtgac agggaaatga gatcattatt       840
     gagaagtcgt gcctcaattg atattgctgc gaaattacct gaaaaacccg tgatatgctc       900
     ggaacgtgtt agtctgctgg atcagcacac tcagggagtc gatttcactg ttacagatat       960
     cgaatccgtc aaggacgatg acgcaggaac gtcgatcttg ggacctaaga tggttccgat      1020
     cgagcaagta ccgtccgttg agcttccgtc gtcgaaagca ggtaggaacc tgctttcagc      1080
     ctgattgttg ggttgtgtaa gacatggggg gttttgagta aaggggctag tcccccagag      1140
     tgagacgagt attaagtgga tgaattctag aaatagataa gtcgcttctc ggacttacct      1200
     gggatgtatg aatactttga tccaaagtcc agaccatcca tccaacgcca tgtcttctcg      1260
     tactaacaac cgctcaaaca acagcagatg cccaacttgt tttgatgagt tggatgcaat      1320
     ggcgcggaat tgtcccgccc acaacaacaa tcccgtgaac gctgtttcac gacgccagcg      1380
     acgcaatgcc gctagagctg ccgcgtatcg aaacgcgaat gcaagattga cggtgcccat      1440
     tccagtggta cctgtttccc gccctcaggc gaagacgtcg tttaggctac ccaacaacca      1500
     gatttgggta actcgcaaag cgagtgaatg gtcctccaag accgttgata ccaacgacgc      1560
     aatccctttc aaaaccatag tcgaagggat caccggaatc aacgatgaga cgaagtttta      1620
     ccgtctctta attggttttg tcgccgtctc tgatgggact tttgggatgg ttgatggagt      1680
     aacgggcgat gttattcctg acccaccggt tgttggacgg ttgggtttta agaagaatac      1740
     gtaccgcagc cgagactttg atctcggtgg taagcttctc aaccagctag acgacagagc      1800
     tgtcgtctgg tgcctcgacg agaagcgtcg agaggccaag agggttcagc tggcaggtta      1860
     ttggattgcc atttccaaac cagctccctt gatgccacca gaagattttc tggtgaatca      1920
     agattgacta gatggtcacc tcggtaggac cgagatgccg cgcattagag gaaattcctg      1980
     tgcgcgatgt ggatacacgc ctccacgtat tgtagatcaa tacgtttgga agtgtgtcgt      2040
     gtgttcctat gaacaacatg catagctgcc gcgcatccgg gcgtgagtct atgatccatg      2100
     cgagcattcc gaatcggacg atttccatgg gaaacccatg agacctttgg gtcgatgctt      2160
     gcgtttggtg ccagtagtat ataatatact actgatgcct cctttatagg agatgc          2216
//