ID FJ390406; SV 1; linear; genomic RNA; STD; VRL; 2073 BP. XX AC FJ390406; XX DT 16-DEC-2008 (Rel. 98, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE Soybean dwarf virus isolate Sangamon minor coat protein, coat protein, and DE P4 genes, complete cds. XX KW . XX OS Soybean dwarf virus OC Viruses; Riboviria; Luteoviridae; Luteovirus. XX RN [1] RP 1-2073 RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT "Sequence diversity of s of Soybean dwarf virus isolates from the RT midwestern United States"; RL Unpublished. XX RN [2] RP 1-2073 RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT ; RL Submitted (16-OCT-2008) to the INSDC. RL Dept. Crop Sci., University of Illinois, USDA-ARS, 1102 S. Goodwin Ave., RL Urbana, IL 61801, USA XX DR MD5; 6566a73ce8bf025f11a37efe4bae38e8. XX FH Key Location/Qualifiers FH FT source 1..2073 FT /organism="Soybean dwarf virus" FT /host="Glycine max (soybean)" FT /isolate="Sangamon" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="Aug-2007" FT /db_xref="taxon:12049" FT CDS 1..2073 FT /codon_start=1 FT /transl_except=(pos:601..603,aa:OTHER) FT /product="minor coat protein" FT /note="readthrough protein; translated by readthrough of FT in-frame termination codon" FT /db_xref="GOA:B7TWE0" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR002929" FT /db_xref="UniProtKB/TrEMBL:B7TWE0" FT /protein_id="ACJ24840.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDAKIAGSFKITIVVLTQNPKXVDGGPGPKPGPDPTPPPAPPP FT EPTPAKHERFIVYTGTLSTLISARQNSDSISLYSIRDQRVRYIEDENANWTYIKAQWYS FT QNSVEAVPMFIYPVPQGTWSIEISCEGYQATSSTTDPHRGKSDGMIAYDDDQNKVWNVG FT VQNNVTISNNKADADWKYGHPNLTINGERFDQQQVVEKDGTVSFHLVTTGPNASFFLVG FT PPVKKIAKYNFCISYGAWTDRDMEFGLVSVVLDEHLEGVRGSQYVRKTLRPGHISVNRS FT HRLQEMPPMREDFSEEDNSSSDSNTYKTDNSPLTVHLVKAGDEENYTTDRSDDVEPTLH FT DADVMKFSGFVGAKDRFTLQGADPIGPGDRSVRRFRPSATLKSAFHSGPTPDELYNAGA FT EQADHDFEHFVSRGKEKLQDEDPMAKLEREAEDLKPDSDNEDNDYDRTAPVFNPADGDP FT WSGIKIKPRLKDQDMRSTLSTGTLKGGSLKPKKEPTPRFEPAPKSVLDRIRRRQV" FT CDS 1..603 FT /codon_start=1 FT /product="coat protein" FT /note="major capsid protein" FT /db_xref="GOA:Q3YB88" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q3YB88" FT /protein_id="ACJ24838.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDAKIAGSFKITIVVLTQNPK" FT CDS 17..586 FT /codon_start=1 FT /product="P4" FT /note="putative movement protein" FT /db_xref="InterPro:IPR001964" FT /db_xref="UniProtKB/TrEMBL:B7TWE2" FT /protein_id="ACJ24839.1" FT /translation="MSQYNDDAIVEPHEALHEFSSWLFQRPPAQHSAEEDNDDEGEIIE FT EEAIFPEDQARLTHSSFRRTASMAVPRELSLSGRLYQSASHSLMEYSRPTMNIRSRVSY FT YSSSPRPLPPRQAPSLMSLTHTASTPKFNRYSINSQLQRAVRNDSPPRLSMASNGMIPV FT KTSSRSTTRGMETPRSRAPSRSRSLS" XX SQ Sequence 2073 BP; 621 A; 492 C; 491 G; 469 T; 0 other; atggtcgcgg ttagcaatgt cacaatacaa cgacgacgca atcgtagagc cgcacgaagc 60 gctccacgag ttcagctcat ggctattcca acgaccaccg gcgcaacaca gcgcagaaga 120 agacaacgac gacgaaggag aaataataga ggaggaggca atatttccgg aggatcaggc 180 aaggctcaca cattccagtt ttcgaaggac ggcatcaatg gcagttccaa gggaactatc 240 actttcgggc cgtctttatc agagtgcaag ccactctctg atggaatact caaggcctac 300 catgaatata agatcacgag tatcttacta cagttcatct ccgaggcctc ttccacctcg 360 tcaggctcca tcgcttatga gcttgaccca cactgcaagt actccgaaat tcaatcgcta 420 ctcaataaat tctcaattac aaagagcggt tcgaaacgat tccccaccaa ggttatcaat 480 ggcctcgaat ggcatgatac cagtgaagac cagttcaagg tccactacaa ggggaatgga 540 gacgccaaga tcgcgggctc cttcaagatc acgatcgttg tcttaactca gaatcccaaa 600 taggtagacg gaggaccggg gccgaaacca ggtccggacc ccacaccccc accagcacca 660 ccacctgaac cgacgccagc caaacatgaa agattcattg tttacaccgg tacactgtca 720 acactcatca gtgctcgaca gaactcagac agtatatcac tctactcaat tcgagaccag 780 agggttagat atattgaaga tgagaatgca aactggacgt acatcaaagc gcaatggtat 840 tcacagaatt ctgtggaagc agtaccaatg tttatctacc cagttccgca aggtacttgg 900 tcaattgaaa tctcatgtga aggttatcag gcgacgtcaa gcaccacgga cccccaccgg 960 gggaagtctg atggaatgat tgcttacgac gatgatcaaa ataaggtgtg gaatgttggt 1020 gtgcaaaaca atgtaaccat ttccaataac aaagccgacg ctgactggaa atatggtcac 1080 cctaatttaa caattaacgg tgaacgtttt gaccagcagc aggtagtcga gaaagatgga 1140 acagtttcgt ttcatttagt aactaccggg cccaacgcga gtttcttttt agttggccct 1200 cccgttaaga agattgccaa gtacaatttc tgtatatcat acggggcttg gacagatcgc 1260 gacatggaat ttggattggt ttctgttgtt ctcgatgaac atttagaggg tgttagaggt 1320 tctcagtacg ttaggaaaac gctaagacca ggtcacatta gcgtcaatcg ttcccaccga 1380 ttgcaagaaa tgcctcccat gcgagaggat ttcagtgagg aagataatag tagtagtgat 1440 agtaatacat ataaaacgga caactctccc ttgaccgttc accttgtaaa agcaggtgac 1500 gaggagaatt atacaacaga tcgatcggac gatgttgaac ccacacttca tgatgctgat 1560 gtcatgaagt tctccgggtt tgttggagcc aaagataggt ttacattgca gggcgctgat 1620 ccaatcggcc ctggtgacag atctgtccgt cgcttcagac cgtctgccac attgaagtct 1680 gcgttccatt cgggaccgac tcctgatgag ttgtacaacg ctggtgctga acaagcggat 1740 cacgacttcg aacactttgt ctctcgaggc aaggagaagc tgcaggatga agatccaatg 1800 gccaaactcg aaagagaggc tgaggattta aaacctgata gtgacaacga agataacgat 1860 tatgatcgaa ccgctcctgt gttcaaccca gctgatggtg acccctggtc aggcattaaa 1920 ataaagccta ggttaaaaga tcaggatatg aggtctacct tgagcaccgg caccttgaaa 1980 ggtggttcac tgaaaccgaa gaaagaacca accccaaggt ttgagccagc gccaaagtcc 2040 gttttagata ggattagacg taggcaagtt taa 2073 //