ID FJ390405; SV 1; linear; genomic RNA; STD; VRL; 2073 BP. XX AC FJ390405; XX DT 16-DEC-2008 (Rel. 98, Created) DT 16-DEC-2008 (Rel. 98, Last updated, Version 1) XX DE Soybean dwarf virus isolate Putnam minor coat protein, coat protein, and P4 DE genes, complete cds. XX KW . XX OS Soybean dwarf virus OC Viruses; Riboviria; Luteoviridae; Luteovirus. XX RN [1] RP 1-2073 RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT "Sequence diversity of s of Soybean dwarf virus isolates from the RT midwestern United States"; RL Unpublished. XX RN [2] RP 1-2073 RA Thekke Veetil T., Hobbs H.A., Domier L.L.; RT ; RL Submitted (16-OCT-2008) to the INSDC. RL Dept. Crop Sci., University of Illinois, USDA-ARS, 1102 S. Goodwin Ave., RL Urbana, IL 61801, USA XX DR MD5; 2777f4a1a6023fe10c29cc1a59dc4940. XX FH Key Location/Qualifiers FH FT source 1..2073 FT /organism="Soybean dwarf virus" FT /host="Glycine max (soybean)" FT /isolate="Putnam" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="Aug-2007" FT /db_xref="taxon:12049" FT CDS 1..2073 FT /codon_start=1 FT /transl_except=(pos:601..603,aa:OTHER) FT /product="minor coat protein" FT /note="readthrough protein; translated by readthrough of FT in-frame termination codon" FT /db_xref="GOA:B7TWD7" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR002929" FT /db_xref="UniProtKB/TrEMBL:B7TWD7" FT /protein_id="ACJ24837.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDTKIAGSFKITIVVLTQNPKXVDGGPGPKPGPDPTPPPAPPP FT EPTPAKHERFIVYTGTLSTLISARQNSDSISLYSIRDQRVRYIEDENANWTYIKAQWYS FT QNSVEAVPMFIYPVPQGTWSIEISCEGYQATSSTTDPHRGKSDGMIAYDDDQNKVWNVG FT VQNNVTISNNKADADWKYGHPNLTINGERFDQQQVVEKDGTISFHLVTTGPNASFFLVG FT PPVKKIAKYNYCISYGAWTDRDMEFGMVSVVLDEHLEGVRGSQYVRKTLRPGHISVNRT FT HRLQEMPPMREDFSEEDNSSSDSNTYKTDNSPLTVHFVKAGDEENYTTDRSDDVEPTLH FT DADVMKFSGFVGAKDRFTLQGADPIGPGDRSVRRFRPSATLKSAFHSGPTPDELYNAGA FT EQADHDFEHFVSRGKEKLQDEDPMAKLEREAEDLKPDSDNEDNDYDRTAPVFNPADGDP FT WSGIKIKPRLKDQDMRSTLSTGTLKGGSLKPKKEPTPRFEPAPKSVLDRIRRRQV" FT CDS 1..603 FT /codon_start=1 FT /product="coat protein" FT /note="major capsid protein" FT /db_xref="GOA:B7TWD8" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B7TWD8" FT /protein_id="ACJ24835.1" FT /translation="MVAVSNVTIQRRRNRRAARSAPRVQLMAIPTTTGATQRRRRQRRR FT RRNNRGGGNISGGSGKAHTFQFSKDGINGSSKGTITFGPSLSECKPLSDGILKAYHEYK FT ITSILLQFISEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTKVINGLE FT WHDTSEDQFKVHYKGNGDTKIAGSFKITIVVLTQNPK" FT CDS 17..586 FT /codon_start=1 FT /product="P4" FT /note="putative movement protein" FT /db_xref="InterPro:IPR001964" FT /db_xref="UniProtKB/TrEMBL:B7TWD9" FT /protein_id="ACJ24836.1" FT /translation="MSQYNEDAIVEPHEALHEFSSWLFQRPPAQHSAEEDNDDEGEIIE FT EEAIFPEDQARLTHSSFRRTASMVVPRELSLSGRLYQSASHSLMEYSRPTMNIRSRVSY FT YSSSPRPLPPRQAPSLMSLTHTASTPKFNRYSINSQLQRAVRNDSPPRLSMASNGMIPV FT KTNSRSTTRGMETPRSQAHSRSRSLS" XX SQ Sequence 2073 BP; 633 A; 489 C; 484 G; 467 T; 0 other; atggtcgcgg ttagcaatgt cacaatacaa cgaagacgca atcgtagagc cgcacgaagc 60 gctccacgag ttcagctcat ggctattcca acgaccaccg gcgcaacaca gcgcagaaga 120 agacaacgac gacgaaggag aaataataga ggaggaggca atatttccgg aggatcaggc 180 aaggctcaca cattccagtt ttcgaaggac ggcatcaatg gtagttccaa gggaactatc 240 actttcgggc cgtctttatc agagtgcaag ccactctctg atggaatact caaggcctac 300 catgaatata agatcacgag tatcttacta cagttcatct ccgaggcctc ttccacctcg 360 tcaggctcca tcgcttatga gcttgaccca cactgcaagt actccgaaat tcaatcgcta 420 ctcaataaat tctcaattac aaagagcggt tcgaaacgat tccccaccaa ggttatcaat 480 ggcctcgaat ggcatgatac cagtgaagac caattcaagg tccactacaa ggggaatgga 540 gacaccaaga tcgcaggctc attcaagatc acgatcgttg tcttaactca gaatcctaaa 600 taggtagacg gaggaccggg gccgaaacca ggtccggacc ccacaccccc accagcacca 660 ccacctgaac cgacgccagc caaacatgaa agattcattg tttacaccgg tacactgtca 720 acactcatca gtgctcgaca gaactcagac agtatatcac tctactcaat tcgagaccag 780 agggttagat atattgaaga tgagaatgca aactggacgt acatcaaagc gcaatggtac 840 tcacagaatt ctgtggaagc agtaccaatg tttatctacc cagttccgca aggcacttgg 900 tcaattgaaa tctcatgtga aggctatcag gccacgtcaa gcaccacgga cccccaccgg 960 gggaagtctg atggaatgat tgcttacgac gatgatcaaa ataaggtgtg gaatgttggt 1020 gtgcaaaaca atgtaaccat ttccaataac aaagccgacg ctgactggaa atatggtcac 1080 cctaatttaa caattaacgg tgaacgtttt gaccagcagc aggtagtcga gaaagatgga 1140 acaatttcgt ttcatttagt aactaccggg cccaacgcga gtttcttttt agttggacct 1200 ccagttaaga agattgccaa gtacaactac tgtatatcat acggcgcttg gacagaccgc 1260 gacatggaat ttggaatggt ctctgttgtt ctcgatgaac atttagaggg tgttagaggt 1320 tctcagtacg ttaggaaaac gctaagacca ggtcatatta gcgtcaatcg tacccaccga 1380 ttgcaagaaa tgcctcccat gcgagaggat ttcagtgagg aagataatag tagtagtgat 1440 agtaatacat ataaaacgga caactctccc ttgactgttc actttgtaaa agcaggtgac 1500 gaggagaatt atacaacaga tcgatcggac gatgttgaac ccacacttca tgatgctgat 1560 gtcatgaagt tctccgggtt tgttggagcc aaagataggt ttacgttgca gggcgctgat 1620 ccaatcggcc ctggtgacag atctgtccgt cgctttagac cgtctgccac attgaagtct 1680 gcgttccatt cgggaccgac tcctgatgag ttgtacaacg ctggtgctga acaagcggat 1740 cacgacttcg aacactttgt ctctcgaggc aaagagaagc tacaggatga agatccaatg 1800 gccaaactcg aaagagaggc tgaggattta aaacctgata gtgacaacga agataacgat 1860 tatgatcgaa ccgctcctgt gttcaaccca gctgatggtg acccctggtc aggcattaaa 1920 ataaagccta gattaaaaga tcaggatatg aggtctacct tgagcactgg caccttgaaa 1980 ggtggttcac tgaaaccgaa gaaagaacca accccaaggt ttgagccagc gccaaagtcc 2040 gttttagata ggattagacg taggcaggtt taa 2073 //