ID   FJ361237; SV 1; linear; genomic RNA; STD; VRL; 1565 BP.
XX
AC   FJ361237;
XX
DT   03-NOV-2008 (Rel. 97, Created)
DT   03-NOV-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Plum pox virus isolate N1 from Greece polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1565
RA   Malinowski T.;
RT   "Partial characterization of Plum pox virus isolates identified in the
RT   nectarine fruit imported to Poland from Greece";
RL   Unpublished.
XX
RN   [2]
RP   1-1565
RA   Malinowski T.;
RT   ;
RL   Submitted (06-OCT-2008) to the INSDC.
RL   Plant Physiology and Biochemistry, Res. Institute of Pomology and
RL   Floriculture, Pomologiczna 18, Skierniewice 96-100, Poland
XX
DR   MD5; ff4fc28a3d6a1b2b743afc6dfd28c88f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1565
FT                   /organism="Plum pox virus"
FT                   /host="Prunus persica"
FT                   /strain="M (Marcus)"
FT                   /isolate="N1"
FT                   /mol_type="genomic RNA"
FT                   /country="Greece"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..>1565
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6VB38"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR011492"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR039560"
FT                   /db_xref="UniProtKB/TrEMBL:B6VB38"
FT                   /protein_id="ACJ04791.1"
FT                   /translation="DAADLGGRYDISVRSLLGSQYKRLKDAVRRKRDDVVCYTHQSMGK
FT                   LFCKAIGISTSFLPSTLKMFDMLIIFGLLLSIGATCNSMINEHKHLKQVAADREDKKRF
FT                   KRLQVLYTRLLEKIGSTPTADEFLEYVQGENPDLLKYAEDLIGDGQVVVHQSKRDSQAN
FT                   LERVVAFVALVMMLFDSERSDGVYKILNKLKGVMGSIDQTVHHQSLDDIEDMLDEKKLT
FT                   VDFVLQXXXXXXXXXXXXXXXXWWTNQLETGNVIPHYRTEGHFLEFTRENAAHIANEVM
FT                   HGSHQDILIRGAVGSGKSTGLPFHLSKKGHVLLIEPTRPLAENVCKQLRGQPFNVNPTL
FT                   RMRGMSTFGSTPITVMTSGYALHFLANNPTYLDNYKCIIFDECHVHDASAMAFRCLLSE
FT                   YSYPGKILKVSATPPGHEVDFKTQKEVKVIVEEALSFQQFVSNLGTGCNSDVLKHGVNV
FT                   LVYVASYNEVDTLSKLLTDRSFKVSKVDGRTMKVGNVEIPTSGTQAKPHFVVATNIIEN
FT                   GVTL"
FT   mat_peptide     1..465
FT                   /product="P3 protein"
FT   mat_peptide     466..621
FT                   /product="6K1 protein"
FT   mat_peptide     622..1565
FT                   /product="CI"
FT                   /note="cylindrical inclusion protein"
XX
SQ   Sequence 1565 BP; 459 A; 304 C; 362 G; 386 T; 54 other;
     gacgcagcag atttaggagg caggtacgac atctccgttc ggtcattact tggcagccaa        60
     tacaaacgcc tgaaagacgc agtycggcgg aaaagagacg acgttgtttg ttacacacac       120
     cagtcgatgg gaaagctatt ctgcaaagct atcggaattt ccacaagttt tcttccaagc       180
     actctgaaga tgtttgayat gctcatcata tttggtctcc tgctttcaat aggagccaca       240
     tgcaattcaa tgattaatga gcacaaacat ttaaagcaag ttgctgccga tcgtgaagat       300
     aagaaaagat tcaagagatt gcaggtcttg tacacgagac tattagaaaa gattggtagc       360
     acaccaacag cggatgaatt tcttgaatat gtgcaaggtg agaaccctga tctattgaaa       420
     tatgcagagg acttgatcgg ygatgggcaa gttgttgtgc atcaaagcaa aagagaytca       480
     caagctaatc tggarcgagt cgtagcattt gtagcccttg ttatgatgct ttttgattcg       540
     gaacggagtg atggtgttta caaaatcctc aataagctta agggcgtcat gggaagtatt       600
     gatcagactg ttcaccatca aagtttggay gacattgaag acatgttgga cgaaaagaaa       660
     ttgacagtcg atttcgtctt gcaannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       720
     nnnnnnnnnn nntggtggac taatcagctt gaaacaggaa atgtgatccc acactacaga       780
     actgaaggac actttctcga atttacacga gaaaacgcgg cacacattgc aaacgaagtt       840
     atgcatggtt cacatcaaga catcctaatc cgcggagcgg ttggctcagg taagtcaact       900
     gggttgccat ttcatctaag caaaaagggt catgttttgc taattgaacc cactcgacca       960
     ttagctgaaa atgtgtgcaa gcaactacga gggcaaccat tcaacgttaa tcccacgtta      1020
     cgtatgcgcg gaatgagcac ttttgggtca actccaatca ctgtgatgac gagtggttac      1080
     gcactgcact tcttagcgaa caatccgact tatttggata actacaagtg cattatcttc      1140
     gatgagtgtc acgtacacga cgcatcagca atggcattta gatgtctcct ttcggagtat      1200
     tcgtacccag ggaagatact gaaagtctca gcaacacctc ccgggcatga agttgatttc      1260
     aagacacaaa aggaggtgaa ggttatcgtt gaggaagcac tgtcattcca gcagttcgtt      1320
     tctaatcttg gcactggatg caatagtgat gtcttgaagc atggcgttaa cgtgctggtc      1380
     tatgtggcaa gttacaatga ggtggacaca ctaagcaagc tgcttacgga tagaagcttt      1440
     aaggtttcga aagttgatgg gcgaaccatg aaagtcggca atgtcgaaat tccaacgagt      1500
     ggtactcaag ccaagccaca ttttgtggtt gcaacaaaca ttatcgagaa tggagtcaca      1560
     ctgga                                                                  1565
//