ID   FJ357571; SV 1; linear; genomic RNA; STD; VRL; 1422 BP.
XX
AC   FJ357571;
XX
DT   03-NOV-2008 (Rel. 97, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Tobacco rattle virus isolate TRV-E,F,G-peony intercellular transport
DE   protein (P1a) and 16 kDa protein (P1b) genes, complete cds.
XX
KW   .
XX
OS   Tobacco rattle virus
OC   Viruses; Riboviria; Virgaviridae; Tobravirus.
XX
RN   [1]
RP   1-1422
RX   DOI; 10.1094/PDIS-93-6-0675B.
RX   AGRICOLA; IND44241229.
RA   Robertson N.L., Brown K.L., Winton L.M., Holloway P.S.;
RT   "First Report of Tobacco rattle virus in Peony in Alaska";
RL   Plant Dis. 93(6):675-675(2009).
XX
RN   [2]
RP   1-1422
RA   Robertson N.L., Brown K.L.;
RT   ;
RL   Submitted (03-OCT-2008) to the INSDC.
RL   USDA, ARS, 533 E. Fireweed Ave., Palmer, AK 99645, USA
XX
DR   MD5; f22a0f143759d66850c158a4c34248e2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1422
FT                   /organism="Tobacco rattle virus"
FT                   /segment="RNA1"
FT                   /host="Paeonia lactiflora 'Sarah Bernhardt'"
FT                   /isolate="TRV-E,F,G-peony"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12295"
FT   gene            6..764
FT                   /gene="P1a"
FT   CDS             6..764
FT                   /codon_start=1
FT                   /gene="P1a"
FT                   /product="intercellular transport protein"
FT                   /note="29 kDa protein"
FT                   /db_xref="InterPro:IPR028919"
FT                   /db_xref="UniProtKB/TrEMBL:B6VAD3"
FT                   /protein_id="ACJ03581.1"
FT                   /translation="MEDKSLATLKKKTFEVSKFSNLGAIELFVDSRRKRPKYFHRRRET
FT                   VLNHVGGRKSEHKLDVFDQRDYKMIKSYAFLKIVGVQLVVTSHLPADTPGFIQIDLLDS
FT                   RLTEKRKKGKTIQRFKARACDNCSVAQYKVEYSISTQENVLDVWKVGCISEGVPVCDGT
FT                   YPFSIEVSLIWVATDSTRRLNVEELNSSDYIEGDFTDQEVFGEFMSLKQVEMKTIEAKY
FT                   DGPYRPATTRPKSLLSSEDVKGASKKKNSS"
FT   gene            789..1214
FT                   /gene="P1b"
FT   CDS             789..1214
FT                   /codon_start=1
FT                   /gene="P1b"
FT                   /product="16 kDa protein"
FT                   /db_xref="InterPro:IPR007968"
FT                   /db_xref="UniProtKB/TrEMBL:B6VAD4"
FT                   /protein_id="ACJ03582.1"
FT                   /translation="MTCVLKGCVNEVTVLGHETCSIGHANRLRKQVADMVGVTRRCAEN
FT                   NCGWFVCVVINDFTFDVYNCCGRSHLEKCRKRVEARNREIWKQIRRNQAENMSTTAKKS
FT                   HNSKTSKKKFKEDREFGTPKRFLRDDVPFGIDQLFAF"
XX
SQ   Sequence 1422 BP; 425 A; 205 C; 354 G; 438 T; 0 other;
     gtaagatgga ggacaaatcg ttggctactc ttaagaagaa gactttcgag gtttcgaagt        60
     tttcgaattt gggtgccatt gagttgtttg tagatagtag gaggaagaga ccgaagtact       120
     ttcacagaag aagagagact gtcctgaatc atgttggtgg aaggaagagt gaacataagt       180
     tagacgtttt tgatcaaagg gattacaaaa tgattaaatc ttatgcgttt ttgaagatag       240
     taggtgtgca acttgttgtc acatcacatc tacctgcaga cacgcctggg tttattcaaa       300
     tcgatctgtt ggattcgagg cttactgaga aaagaaagaa aggaaagact attcagagat       360
     tcaaagctcg agcttgcgat aattgttcag ttgcgcagta caaggttgaa tacagtattt       420
     ctacacaaga gaatgtactc gatgtctgga aggtgggttg tatctctgag ggcgttccgg       480
     tctgtgacgg cacataccct ttcagtattg aagtgtcact catttgggtt gctactgatt       540
     cgactagacg tcttaatgtg gaagaactga acagttcaga ctacatcgaa ggcgatttta       600
     ccgatcagga ggttttcggt gagttcatgt ctttgaaaca agttgagatg aagacgattg       660
     aggcgaagta tgatggtccg tacagaccag ctactactag accaaaatca ttgttgtcaa       720
     gtgaagatgt taagggagcg tctaaaaaga aaaactcgtc ttaaggcata aagaaattta       780
     ctgtcaatat gacgtgtgta ctcaagggtt gtgtgaatga agtcactgtt cttggtcacg       840
     agacgtgtag tatcggtcat gctaacaggt tgcgaaagca agttgctgac atggttggtg       900
     tcacacgcag gtgtgcggaa aataattgtg gatggtttgt ctgtgttgtt atcaatgatt       960
     ttacttttga tgtgtataat tgttgtggcc gtagtcacct tgaaaaatgt cgcaaacgcg      1020
     ttgaagcaag aaatcgggag atctggaaac agattcgacg aaatcaagct gaaaacatgt      1080
     ctacgacagc taaaaagtct cataattcaa agacctctaa gaagaaattc aaagaggaca      1140
     gagagttcgg gacaccaaaa agatttttaa gagatgatgt tcctttcgga attgatcaat      1200
     tgtttgcttt ttgattttat tttaaattgt tatctgtttc tgtgtataga ctgtttgaga      1260
     ttggtgtttg accaactcat tgtcttacca taggggaacg gactttgttt gtgttgttat      1320
     tttatttgta ttttattaaa attctcaatg atctgaagaa gctttattgc taagagatta      1380
     ttggggggtg agtaagtact tttaaagtga tgatggtaca aa                         1422
//