ID FJ345399; SV 1; circular; genomic DNA; STD; VRL; 2752 BP. XX AC FJ345399; XX DT 03-NOV-2008 (Rel. 97, Created) DT 03-NOV-2008 (Rel. 97, Last updated, Version 1) XX DE Mesta yellow vein mosaic virus-[India:Haringhata:Leaf Curl:2007] clone DE LC-Har segment DNA-A, complete sequence. XX KW . XX OS Mesta yellow vein mosaic virus-[India:Haringhata:Leaf Curl:2007] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2752 RA Paul S., Ghosh R., Das S., Chaudhuri S., Ghosh S.K., Roy A.; RT "Molecular epidemiology and biodiversity of the begomovirus complex RT associated with leaf curl disease of kenaf in India"; RL Unpublished. XX RN [2] RP 1-2752 RA Paul S., Ghosh R., Das S., Chaudhuri S., Ghosh S.K., Roy A.; RT ; RL Submitted (26-SEP-2008) to the INSDC. RL Crop Protection, Central Research Institute for Jute and Allied Fibres, RL Barrackpore, Kolkata, West Bengal 700 120, India XX DR MD5; 5c208ad854edea0c2bb2f217429d2c69. XX FH Key Location/Qualifiers FH FT source 1..2752 FT /organism="Mesta yellow vein mosaic FT virus-[India:Haringhata:Leaf Curl:2007]" FT /segment="DNA-A" FT /host="Hibiscus cannabinus" FT /mol_type="genomic DNA" FT /country="India:East India, Haringhata" FT /collection_date="2007" FT /clone="LC-Har" FT /db_xref="taxon:570535" FT gene 132..488 FT /gene="AV2" FT CDS 132..488 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:B6V8K3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B6V8K3" FT /protein_id="ACJ03801.1" FT /translation="MGIQLLKDSPETVHGFRCIFAINFFQQLSEEYSPETVGYDQIRDL FT ISILRPRIYVEASCRYRHFYPRVEGASSTELRQPLCNPCSCPHCPRHKVSYVGEQAHVS FT EAQNVQDVQKPRCS" FT gene complement(283..600) FT /gene="AC5" FT CDS complement(283..600) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B6V8K4" FT /protein_id="ACJ03802.1" FT /translation="MGEPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTSLRNIWASV FT HPVHSGLPIHGPVRPHTRLCDADSGGNCTGCIGAVEVQSTTHLRRGGRNDDIGRTLRHK FT S" FT gene 292..1062 FT /gene="AV1" FT CDS 292..1062 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B6V8K5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B6V8K5" FT /protein_id="ACJ03803.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVAPTVRVTKSRMWA FT NRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEP FT STATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENAFVLYMACTHASNPVYATLKVRSYFYDSVTN" FT gene complement(1028..1468) FT /gene="AC3" FT CDS complement(1028..1468) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:B6V8K6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B6V8K6" FT /protein_id="ACJ03804.1" FT /translation="MDLRTGEPITAAQAWSGAYIWEVPNPLYFKILSHEDRPYSSNMDI FT ITVRIQFNYNLRRALGVHKCFLTFRVWTTLHPPTGLFLRVFKTQVLKYLKNLGVISINA FT IIRAVDHVLYKKMEHTMFVDQTSEIKFDLININLLQNRRSNS" FT gene complement(1161..1613) FT /gene="AC2" FT CDS complement(1161..1613) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:B6V8K7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B6V8K7" FT /protein_id="ACJ03805.1" FT /translation="MRSSSPLKDHCTQVPIKVQHREAKRRNRRKRVDLECGCSYYLSIN FT CFNHGFTHRGTHHCSSSMEWRLYLGSSKSPLFQNPQPRGPALFEQHGHNNSQDPIQLQP FT SESSGSAQVFSDLPGLDDLTPSDWSFLKGIQNPSAQVSQKSGCNLN" FT gene complement(1510..2598) FT /gene="AC1" FT CDS complement(1510..2598) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /db_xref="GOA:B6V8K8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6V8K8" FT /protein_id="ACJ03806.1" FT /translation="MHPKRFLINSKNYFLTYPNCSLTKEEALSQLQNLQTPTNKKFIKI FT CRELHENGEPHIHVLIQFEGKYKCQNMRFFDLVSPNRSAHFHPNIQGAKSSSDVKAYID FT KDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHN FT LNANLDRIFQEPPAPYVSPFSFSSFNQVPEELEEWASENVVDAAARPLRPRSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFVTLEGPLY FT SGTNQSSAQGSEETQQEEESRS" FT gene complement(2142..2450) FT /gene="AC4" FT CDS complement(2142..2450) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B6V8K9" FT /protein_id="ACJ03807.1" FT /translation="MKMGNLIFTCSSSSKGSTSARICDSSTWSPQTGQHISIRTYRELN FT QAPMSRPTSTRTGTLSSGESFRSTEDQQEEDNRQPTTLTPQHLTREVSQRLLESLRN" XX SQ Sequence 2752 BP; 702 A; 578 C; 632 G; 840 T; 0 other; accggatggc cgcgcgattt ttttgtgggt cccgccacta acacttgtct gccaatcaca 60 tgacgcgctc aaagcttaaa taatttcccg cttaattata agtacttcgt cgctaagttt 120 ctgtttgaaa aatggggatc caacttttaa aggattctcc ggagacggtt cacgggtttc 180 gttgcatctt tgctataaat ttctttcaac aattgtctga ggaatactcc cctgaaacgg 240 ttgggtacga tcaaattcgc gatttaattt ctatcttacg tcctaggatt tatgtcgaag 300 cgtcctgccg atatcgtcat ttctaccccc gcgtcgaagg tgcgtcgtcg actgaacttc 360 gacagcccct atgcaacccg tgcagttgcc cccactgtcc gcgtcacaaa gtctcgtatg 420 tgggcgaaca ggcccatgta tcggaagccc agaatgtaca ggatgtacag aagcccagat 480 gttcctaagg gatgtgaagg cccatgtaag gtgcagtctt ttgatgcgaa gaatgatatt 540 ggtcacatgg gtaaggttat ttgtctttct gatgttacta ggggtattgg gctcacccat 600 cgagtaggga aacgtttctg cgtgaagtca ttgtattttg ttggcaaaat ttggatggac 660 gagaacatca agaccaagaa ccatacgaat actgttatgt tttggattgt tagagatagg 720 cgtccttcag gaaccccaaa cgatttccag caagtgttca atgtttatga taacgagccc 780 tctacggcta ctgtgaagaa cgaccagcgt gatcgttttc aggtattgag gaggtttcaa 840 gcaacagtca caggtggtca atatgctgct aaggaacaag ctataattag gaaattctat 900 cgtgttaaca attatgtggt gtataatcac caggaagctg ggaagtacga aaaccacact 960 gagaatgcgt ttgtgttgta tatggcatgt actcatgcct ctaaccctgt gtatgctact 1020 ttgaaagtta ggagttactt ctacgattct gtaacaaatt aatattaata agatcgaatt 1080 ttatttctga agtttggtct acaaacatgg tgtgttccat tttcttatac aatacatgat 1140 caactgctct aataattgcg ttaattgaga ttacacccag atttttgaga tacttgagca 1200 cttgggtttt gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagaccc 1260 ggaaggtcag aaaacacttg tgcactccca gagctctccg aaggttgtag ttgaattgga 1320 tcctgactgt tattatgtcc atgttgctcg aataaggccg gtcctcgtgg ctgaggattt 1380 tgaaatagag gggatttgga acttcccaga tataggcgcc actccatgct tgagctgcag 1440 tgatgggttc ccctgtgcgt aaatccatgg ttgaagcagt taatggatag ataataagaa 1500 cacccgcatt caagatctac tctcttcctc ctgttgcgtc tcttcgcttc cctgtgctga 1560 actttgattg gtacctgagt acaatggtcc ttcaagggtg acgaagatcg cattctttac 1620 tgcccagttc tttagtgctg tgttcttttc ctcgtcgaga aattctttat aactgctgtt 1680 gggaccagga ttgcagagga agattgtcgg tattccgcct ttaatttgaa ctggcttccc 1740 gtactttgtg ttggattgcc agtccctttg ggcccccatg aactccttaa agtgcttgag 1800 gaagtgcgga tcgacgtcat caatgacgtt ataccaggcg tcgttattgt acaccttggg 1860 actcaggtcc agatgtccgc ataaatagtt atgtggtccc agagatctgg cccacatcgt 1920 cttccccgtt cgactatctc cctcaattac tatacttcga ggtctcaggg gccgcgcagc 1980 ggcatcgaca acgttttccg acgcccactc ttcaagttct tctggaactt gattgaaaga 2040 agaaaaagaa aaaggagaaa cataaggagc tggtggctcc tgaaatatcc tgtctagatt 2100 tgcatttaaa ttatgaaatt gtagtacaaa atctttagga gctagttcct taatgactct 2160 aagagcctct gacttacttc ccgcgttaag tgctgcggcg taagcgtcgt tggctgtctg 2220 ttgtcctcct cttgctgatc ttccgtcgat ctgaaactct ccccactcga gagtgtcccc 2280 gtccttgtcg atgtaggcct tgacatcgga gcttgattta gctccctgta tgttcggatg 2340 gaaatgtgct gacctgtttg gggagaccag gtcgaagaat cgcatattct ggcacttgta 2400 cttcccttcg aactggatga gcacgtgaat atgaggttcc ccattttcat ggagctctct 2460 gcagatcttg atgaattttt tatttgtagg agtttgtagg ttttgaagtt gggaaagtgc 2520 ttcttctttt gtaagagagc aatttggata agtgaggaaa taatttttgg aattaataag 2580 aaaacgtttc ggatgcatgt tgaccaaatt tgatacccga ttgaccggct ttgacacttt 2640 ctcctgtata tcggtgatca atatatagtg atcaccaaat ggcaaaatgg taaaaaaaca 2700 acttttattt aaaattcgaa aaaaaaattt ttgcggccat ccgcttaata tt 2752 //