ID FJ268745; SV 1; linear; genomic RNA; STD; VRL; 3045 BP. XX AC FJ268745; XX DT 03-NOV-2008 (Rel. 97, Created) DT 03-NOV-2008 (Rel. 97, Last updated, Version 1) XX DE Cucumber mosaic virus isolate Cah1 segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3045 RA Wang H., Chen J., Du Z.; RT "Complete Sequence and Pathogenicity Analysis of Cucumber mosaic virus Cah1 RT isolate"; RL Unpublished. XX RN [2] RP 1-3045 RA Wang H., Chen J., Du Z.; RT ; RL Submitted (30-SEP-2008) to the INSDC. RL Zhejiang Sci-Tech University, Institute of Bioengineering, Xiasha Road 2, RL Hangzhou, Zhejiang 310018, China XX DR MD5; eab3f1ca1da8f618a36d5d0754b9cf7b. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers FJ268744-FJ268746 represent the complete CC genome of Cucumber mosaic virus isolate Cah1. XX FH Key Location/Qualifiers FH FT source 1..3045 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Canna sp." FT /isolate="Cah1" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="May-2007" FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /product="2a protein" FT /db_xref="GOA:B6V8E8" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:B6V8E8" FT /protein_id="ACJ04713.1" FT /translation="MAFPAPASSLANLLNGTYGVDTPEEVERVRSEQHEEAAAACRNYK FT PLSAVDVSESVTEDAHSLRTPDGAPSEEVSVEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLVPSTSNRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDIQINVSSRDVPGYSLEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVAIPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLATSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGVTSQFSPLFTALFERFQRCLRERIILPVGKISSLEVSGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYFSDRRQC FT ELINSFSCVELRIERSSFIKQRKKKDGIERRRNDKRRTPTGPHGGGEETETKVSQEEST FT GTMLQKSQRESAFKSQTVPLPTVLSSRWFGTDRDVPPRERGGIVRV" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:B6V8E9" FT /protein_id="ACJ04714.1" FT /translation="MELNEGAMTNVELQLARMVEAKRQRRRSHKKNRRERCYKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYRHVNVAELSESEAPCFTLPAEDDHDFDDTDWFAGN FT EWAEGAF" XX SQ Sequence 3045 BP; 751 A; 678 C; 721 G; 895 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagacttt 60 ctagtttctt tctttcctat ggctttccct gcccccgctt cctcattggc caatcttttg 120 aatggtactt acggtgtcga cactcccgag gaagtggaac gtgtgcgatc tgagcaacac 180 gaagaggctg ctgcggcttg tcgtaattac aagcctttat ccgctgtgga tgtcagcgag 240 agtgtcacag aggatgcgca ttccctccga actccagacg gagctccctc tgaagaggtg 300 tctgttgagt ttgttactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacagttatg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gctatggcta gagctttgct gttggtacct 480 agcacatcca accgaaccat gaagtgtttt gaagacctgg tcgcggctat ttacactaaa 540 tccgatttct attatgatga tgagtgtgaa gctgatgaca ttcagataaa tgtctcgtct 600 cgcgatgtac ccggttactc tctcgaaccg tggtcccgaa cgtctggatt cgaaccaccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga ttttaatgct 720 ttaaagaaat cgtgcgctga gaggactttc gctgatgatt atgttattga aggtttagat 780 ggtgttgttg acaatgcaac tttgttgtct aatttaggcc cgtttttggt gcctgttaag 840 tgccaatacg agaaatgtcc aacacctacc gtcgcgattc ctccgagctt aaatcgtgct 900 actgatcgtg ttgatatcaa tttagttcaa tccatttgtg attccactct gcccacgcat 960 agcaactacg atgactcttt tcatcaagtg ttcgtcgaaa gcgctgacta ttctattgat 1020 ctggatcatg ttagacttcg gcaatctgat ctcattgcga aaattccaga ttcagggcat 1080 atgataccgg ttttgaatac cgggagtggt cacaagagag taggtacgac gaaggaggtc 1140 cttacagcaa tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaatctg 1200 tccaggttga gtaaggctgt ggctgagaga tttttcatct cgtacattaa tggcaactct 1260 ttagccacca gcaactttgt taacgtcgtt agcaacttcc acgattacat ggaaaaatgg 1320 aagtcttcag gcctctcgta tgacgatctt ccagatctgc atgctgagaa tttgcagttt 1380 tatgatcaca tgataaaatc tgatgtgaag cctgtcgtta gcgacacatt gaacattgac 1440 agaccggttc cagctactat aacgtatcat aagaaaggtg taacctccca gttctcaccg 1500 ttattcacag ctctatttga gcgtttccag agatgccttc gagaacgtat tattcttcct 1560 gttggaaaga tttcatccct tgaggtgtca ggatttgatg ttaagaacaa acactgtctc 1620 gagatcgatt tgtccaaatt cgacaagtct caaggtgaat tccatttgat gattcaggaa 1680 cacattttga atggtctagg gtgcccagct ccgataacta agtggtggtg tgatttccac 1740 agattctctt acattagaga ccgtagagct ggtgttggta tgcctatcag tttccagaga 1800 cgaactggtg atgcatttac ctacttcggt aacaccattg tcaccatggc tgaatttgca 1860 tggtgttacg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttcagtgc ttccccctgt tggtgatccg agtaagttca caactctttt caacatggaa 1980 gctaaggtga tggagccagc agtaccatac atttgttcga agtttctact ctctgacgag 2040 ttcggtaata ccttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggaactaag 2100 aaaatcccct attccgacaa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgcatcg atcagctttc actcttcttt 2220 gagttgaaat acaggaagtc cggggcggag gctgccttga tgttaggcgc ctttaagaaa 2280 tataccgcta atttccagtc ctacaaagaa ctctattttt ccgatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagttg aggattgagc gttcgagttt cattaagcag 2400 cgaaagaaga aagatggaat tgaacgaagg cgcaatgaca aacgtcgaac tccaactggc 2460 ccgcatggtg gaggcgaaga gacagagacg aaggtctcac aagaagaatc gacgggaacg 2520 atgttacaaa agtcccagcg agagagcgcg ttcaaatctc agactgttcc gcttcctacc 2580 gttctatcaa gtagatggtt cggaactgat agagatgtac cgccacgtga acgtggcgga 2640 attgtccgag tctgaggctc cttgttttac gttaccagcg gaagatgacc atgattttga 2700 cgatacggat tggttcgctg gtaacgagtg ggcggaaggt gcgttctgaa cccctccttc 2760 ctttctccct ccagttttct gaggcgggag ctgagttggc agtattgcta caaactgtct 2820 gaagtcacta aacgttttac ggtgaacggg ttgtccatcc agctaacggc taaaatggtc 2880 agtcgtggag aaatccacgc cggagactta caagtctctg aggcaccttt gaaaccatct 2940 cctaggtttc ttcggaagga cttcggtccg tgtacttcta gcacaggatg ctagtttagg 3000 gtacgggtgt ccccccgctt cgcgggggtt tccaaaagga gacca 3045 //