ID   FJ263323; SV 1; linear; genomic RNA; STD; VRL; 1919 BP.
XX
AC   FJ263323;
XX
DT   02-OCT-2009 (Rel. 102, Created)
DT   18-NOV-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Pepino mosaic virus isolate PMU08/38 nonfunctional triple gene block
DE   protein 1 (TGBp1) gene, complete sequence; and triple gene block protein 2
DE   (TGBp2), triple gene block protein 3 (TGBp3), and capsid protein (CP)
DE   genes, complete cds.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1919
RX   DOI; 10.1128/JVI.01486-09.
RX   PUBMED; 19759144.
RA   Gomez P., Sempere R.N., Elena S.F., Aranda M.A.;
RT   "Mixed infections of Pepino mosaic virus strains modulate the evolutionary
RT   dynamics of this emergent virus";
RL   J. Virol. 83(23):12378-12387(2009).
XX
RN   [2]
RP   1-1919
RA   Gomez P., Sempere R.N., Elena S.F., Aranda M.A.;
RT   ;
RL   Submitted (29-SEP-2008) to the INSDC.
RL   Dpto Biologia del Estres y Patologia Vegetal, Centro de Edafologia y
RL   Biologia Aplicada del Segura (CEBAS)-CSIC, Campus de Espinardo, Espinardo,
RL   Murcia Apdo. Correos 164 30100, Spain
XX
DR   MD5; b79c7dc0b16d9dc57ff858d0b39dab8d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1919
FT                   /organism="Pepino mosaic virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="PMU08/38"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /collection_date="Apr-2008"
FT                   /note="EU type acronym: PepMV"
FT                   /db_xref="taxon:112229"
FT   gene            1..704
FT                   /gene="TGBp1"
FT   misc_feature    1..704
FT                   /gene="TGBp1"
FT                   /note="nonfunctional triple gene block protein 1 due to
FT                   mutation"
FT   gene            685..1056
FT                   /gene="TGBp2"
FT   CDS             685..1056
FT                   /codon_start=1
FT                   /gene="TGBp2"
FT                   /product="triple gene block protein 2"
FT                   /db_xref="GOA:Q8JJH7"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JJH7"
FT                   /protein_id="ACO59292.1"
FT                   /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT                   PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT                   SCYNTHSATNNTQPLSGHH"
FT   gene            908..1162
FT                   /gene="TGBp3"
FT   CDS             908..1162
FT                   /codon_start=1
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:C9WBT5"
FT                   /protein_id="ACO59293.1"
FT                   /translation="MSSYLSSFSRWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT                   QAIIDSAAIVITNCENTPEVLKAIDFSPWNGLSFPKFEN"
FT   gene            1206..1919
FT                   /gene="CP"
FT   CDS             1206..1919
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:C9WBT6"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:C9WBT6"
FT                   /protein_id="ACO59294.1"
FT                   /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAAKETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 1919 BP; 561 A; 484 C; 345 G; 529 T; 0 other;
     atggaaagat caactctgat taatttactt caattgcacc acttcgagcc aaaactcagt        60
     gttgaaggaa tcatagttgt gcacggaatt gcaggcactg ggaaaaccac tttacttagg       120
     actttatttt ctgcttatcc tagcttagtt ataggttcac ctaggccttg ctatttagat       180
     aaacaaaaca aaatttcaca agtttgctta tcttgctttc ccaataccca ttgtgatatt       240
     gtcgatgagt atcatttgct agaaagtttt ccagaaccaa aattggctat ctttggtgac       300
     ccctgtcaat gcacatacat tgagagactt agagtcccac attacacttc cttcagaact       360
     catagatttg gaaagtcaac tgctgagatt ttgaacaaac tgtttgacct taatatagtc       420
     tcagttaaga aagaagacga catcgttgaa ttctttaacc cttttgaagt tgaccccact       480
     gagcatatct ctgcctctga agaagaagtt ttggacttcg tttctgacca agtggtgacc       540
     actagctcag aggaactagc aggacttgag tttgcagaaa cacttttcta ctgcacaact       600
     ttgaccgcag ctgttgctga aaatcctgct aagacttcat ctctctgact agacacaccc       660
     acaaactcac cattggggat ctaaatgcca ggtctaactc ctagagctga cctcactgac       720
     acatacaaaa tcattgccat tgctttcttg ttgtcagctt gcatttactt ccaaaatagc       780
     cactaccaac ctgttgctgg agacaacttg caccgtttgc cttttggtgg ccaatatcaa       840
     gacggcacca aaaagatatc ctattttcca caacagcagt catactttca ttctggaaac       900
     aaattaaatg tcctcatact tatcttcatt ctcacgttgg gtattgtcct caccaataaa       960
     tttagtttta gctttagtcg tactactcac cagcattctt gctataacac acattcagca      1020
     accaacaata cacaaccatt gtcaggccat cattgacagt gctgcaatag tcataacaaa      1080
     ttgtgagaac acaccagaag tgcttaaagc aatagacttc tccccttgga acgggttaag      1140
     ttttcctaaa tttgaaaatt agaattaact ttgagcactt cacaattaag ctacaattca      1200
     caatcatgcc tgacacaaca cctgttgctg ccacttcaag tgcaccaccc acagccaaag      1260
     atgctggtgc caaagctcct tctgacttct caaatcccaa tacagctcct agtctcagtg      1320
     atttgaagaa agtcaagtat gtctccaccg tgacctccgt ggccacacca gctgaaattg      1380
     aagccctagg caaaatcttc accgctatgg gccttgccgc caaggagact ggtccagcca      1440
     tgtgggatct agctcgtgca tatgctgacg tgcaaagttc taaatcggca cagctgattg      1500
     gagctacccc ttccaaccct gcactatcac gccgagccct tgctgctcag tttgatcgaa      1560
     tcaatataac ccccaggcaa ttttgcatgt actttgccaa agttgtttgg aacatacttc      1620
     tcgacagcaa cattccacca gcaaattggg ccaaacttgg ttaccaagaa gatacaaaat      1680
     ttgctgcatt tgacttcttt gatggagtca ccaaccctgc cagcctgcag cctgctgatg      1740
     gtcttatcag gcagccaaat gagaaagaac tagctgctca ctccgtagct aagtacggcg      1800
     ccttggctag gcaaaagatc tccacaggta attatattac cacacttgga gaagtcacac      1860
     gtggacacat gggaggagct aacaccatgt acgcgataga cgcaccccct gaactttaa       1919
//