ID   FJ263322; SV 1; linear; genomic RNA; STD; VRL; 1920 BP.
XX
AC   FJ263322;
XX
DT   02-OCT-2009 (Rel. 102, Created)
DT   18-NOV-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Pepino mosaic virus isolate PMU07/36 nonfunctional triple gene block
DE   protein 1 (TGBp1) gene, complete sequence; and triple gene block protein 2
DE   (TGBp2), triple gene block protein 3 (TGBp3), and capsid protein (CP)
DE   genes, complete cds.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1920
RX   DOI; 10.1128/JVI.01486-09.
RX   PUBMED; 19759144.
RA   Gomez P., Sempere R.N., Elena S.F., Aranda M.A.;
RT   "Mixed infections of Pepino mosaic virus strains modulate the evolutionary
RT   dynamics of this emergent virus";
RL   J. Virol. 83(23):12378-12387(2009).
XX
RN   [2]
RP   1-1920
RA   Gomez P., Sempere R.N., Elena S.F., Aranda M.A.;
RT   ;
RL   Submitted (29-SEP-2008) to the INSDC.
RL   Dpto Biologia del Estres y Patologia Vegetal, Centro de Edafologia y
RL   Biologia Aplicada del Segura (CEBAS)-CSIC, Campus de Espinardo, Espinardo,
RL   Murcia Apdo. Correos 164 30100, Spain
XX
DR   MD5; ef98a81c50bdda790a6add2acbecfbb0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1920
FT                   /organism="Pepino mosaic virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="PMU07/36"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /collection_date="Feb-2007"
FT                   /note="EU type acronym: PepMV"
FT                   /db_xref="taxon:112229"
FT   gene            1..704
FT                   /gene="TGBp1"
FT   misc_feature    1..704
FT                   /gene="TGBp1"
FT                   /note="nonfunctional triple gene block protein 1 due to
FT                   mutation"
FT   gene            685..1056
FT                   /gene="TGBp2"
FT   CDS             685..1056
FT                   /codon_start=1
FT                   /gene="TGBp2"
FT                   /product="triple gene block protein 2"
FT                   /db_xref="GOA:Q8JJH7"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JJH7"
FT                   /protein_id="ACO59289.1"
FT                   /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT                   PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT                   SCYNTHSATNNTQPLSGHH"
FT   gene            908..1162
FT                   /gene="TGBp3"
FT   CDS             908..1162
FT                   /codon_start=1
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JSN2"
FT                   /protein_id="ACO59290.1"
FT                   /translation="MSSYLSSFSRWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT                   QAIIDSAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
FT   gene            1207..1920
FT                   /gene="CP"
FT   CDS             1207..1920
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q8JJF2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JJF2"
FT                   /protein_id="ACO59291.1"
FT                   /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 1920 BP; 568 A; 481 C; 344 G; 527 T; 0 other;
     atggaaagat caactctgat taatttactt caattgcacc acttcgagcc aaaactcagt        60
     gttgaaggaa tcatagttgt gcacggaatt gcaggcactg ggaaaaccac tttacttagg       120
     actttatttt ctgcttatcc tagcttagtt ataggttcac ctaggccttg ctatttagat       180
     aaacaaaaca aaatttcaca agtttgctta tcttgctttc ccaatatcca ttgtgatatt       240
     gtcgatgagt atcatttgct agaaagtttt ccagaaccaa aattggctat ctttggtgac       300
     ccctgtcaat gcacatacat tgagagactt agagtcccac attacacttc cttcagaact       360
     catagatttg gaaagtcaac tgctgagatt ttgaacaaac tgtttgacct taatatagtc       420
     tcagttaaga aagaagacga catcgttgaa ttctttaacc cttttgaagt tgaccccact       480
     gagaatatct ctgcctctga agaagaagtc ttggacttcg tttctgacca agtgtgacca       540
     ctagctcaga ggaactagca ggacttgagt ttgcagaaac aactttctac tgcacaacat       600
     tgaccgcagc tgttgctgaa aatcctgcta agactttcat ctctctgact agacacaccc       660
     acaaactcac cattggggaa ctaaatgcca ggtctaactc ctagagctga cctcactgac       720
     acatacaaaa tcattgccat tgctttcttg ttgtcagctt gcatttactt ccaaaatagc       780
     cactaccaac ctgttgctgg agacaacttg caccgtttgc cttttggtgg ccaatatcaa       840
     gacggcacca aaaagatatc ctattttcca caacagcagt catactttca ttctggaaac       900
     aaattaaatg tcctcatact tatcttcatt ctcacgttgg gtattgtcct caccaataaa       960
     tttagtttta gctttagtcg tactactcac cagcattctt gctataacac acattcagca      1020
     accaacaata cacaaccatt gtcaggccat cattgacagt gctgcaatag tcataacaaa      1080
     ttgtgagaac acaccagaag tgcttaaagc aataaacttc tccccttgga acgggttaag      1140
     ttttcctaaa tttgaaaatt agaattagta ttgagtgttc acaaaaatca acttcaataa      1200
     acaatcatgc ctgacacaac acctgttgct gccacttcaa gtgcaccacc cacagccaaa      1260
     gatgctggtg ccaaagctcc ttctgacttc tcaaatccca atacagctcc tagtctcagt      1320
     gatttgaaga aagtcaagta tgtctccacc gtgacctccg tggccacacc agctgaaatt      1380
     gaagccctag gcaaaatctt caccgctatg ggccttgccg ccaatgagac tggtccggcc      1440
     atgtgggatc tagctcgtgc atatgctgac gtgcaaagtt ctaaatcggc acagctgatt      1500
     ggagctaccc cttccaaccc tgcactatca cgccgagccc ttgctgctca gtttgatcga      1560
     atcaatataa cccccaggca attttgcatg tactttgcca aagttgtttg gaacatactt      1620
     ctcgacagca acattccacc agcaaattgg gccaaacttg gttaccaaga agatacaaaa      1680
     tttgctgcat ttgacttctt cgatggagtc accaaccctg ccagcctgca gcctgctgat      1740
     ggtcttatca ggcagccaaa tgagaaagaa ctagctgctc actccgtagc taagtacggc      1800
     gccttggcta ggcaaaagat ctccacaggt aattatatta ccacacttgg agaagtcaca      1860
     cgtggacaca tgggaggagc taacaccatg tacgcgatag acgcaccccc tgaactttaa      1920
//