ID   FJ263320; SV 1; linear; genomic RNA; STD; VRL; 1919 BP.
XX
AC   FJ263320;
XX
DT   02-OCT-2009 (Rel. 102, Created)
DT   18-NOV-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Pepino mosaic virus isolate PMU07/27 nonfunctional triple gene block
DE   protein 1 (TGBp1) gene, complete sequence; and triple gene block protein 2
DE   (TGBp2), triple gene block protein 3 (TGBp3), and capsid protein (CP)
DE   genes, complete cds.
XX
KW   .
XX
OS   Pepino mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-1919
RX   DOI; 10.1128/JVI.01486-09.
RX   PUBMED; 19759144.
RA   Gomez P., Sempere R.N., Elena S.F., Aranda M.A.;
RT   "Mixed infections of Pepino mosaic virus strains modulate the evolutionary
RT   dynamics of this emergent virus";
RL   J. Virol. 83(23):12378-12387(2009).
XX
RN   [2]
RP   1-1919
RA   Gomez P., Sempere R.N., Elena S.F., Aranda M.A.;
RT   ;
RL   Submitted (29-SEP-2008) to the INSDC.
RL   Dpto Biologia del Estres y Patologia Vegetal, Centro de Edafologia y
RL   Biologia Aplicada del Segura (CEBAS)-CSIC, Campus de Espinardo, Espinardo,
RL   Murcia Apdo. Correos 164 30100, Spain
XX
DR   MD5; 81399aee25d5ba39f20037a826e0aed3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1919
FT                   /organism="Pepino mosaic virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="PMU07/27"
FT                   /mol_type="genomic RNA"
FT                   /country="Spain"
FT                   /collection_date="Mar-2007"
FT                   /note="EU type acronym: PepMV"
FT                   /db_xref="taxon:112229"
FT   gene            1..703
FT                   /gene="TGBp1"
FT   misc_feature    1..703
FT                   /gene="TGBp1"
FT                   /note="nonfunctional triple gene block protein 1 due to
FT                   mutation"
FT   gene            684..1055
FT                   /gene="TGBp2"
FT   CDS             684..1055
FT                   /codon_start=1
FT                   /gene="TGBp2"
FT                   /product="triple gene block protein 2"
FT                   /db_xref="GOA:Q8JJH7"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JJH7"
FT                   /protein_id="ACO59282.1"
FT                   /translation="MPGLTPRADLTDTYKIIAIAFLLSACIYFQNSHYQPVAGDNLHRL
FT                   PFGGQYQDGTKKISYFPQQQSYFHSGNKLNVLILIFILTLGIVLTNKFSFSFSRTTHQH
FT                   SCYNTHSATNNTQPLSGHH"
FT   gene            907..1161
FT                   /gene="TGBp3"
FT   CDS             907..1161
FT                   /codon_start=1
FT                   /gene="TGBp3"
FT                   /product="triple gene block protein 3"
FT                   /db_xref="GOA:Q8B083"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B083"
FT                   /protein_id="ACO59283.1"
FT                   /translation="MSSYLSSFSHWVLSSPINLVLALVVLLTSILAITHIQQPTIHNHC
FT                   QVIIDGAAIVITNCENTPEVLKAINFSPWNGLSFPKFEN"
FT   gene            1206..1919
FT                   /gene="CP"
FT   CDS             1206..1919
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:Q8JJF2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JJF2"
FT                   /protein_id="ACO59284.1"
FT                   /translation="MPDTTPVAATSSAPPTAKDAGAKAPSDFSNPNTAPSLSDLKKVKY
FT                   VSTVTSVATPAEIEALGKIFTAMGLAANETGPAMWDLARAYADVQSSKSAQLIGATPSN
FT                   PALSRRALAAQFDRINITPRQFCMYFAKVVWNILLDSNIPPANWAKLGYQEDTKFAAFD
FT                   FFDGVTNPASLQPADGLIRQPNEKELAAHSVAKYGALARQKISTGNYITTLGEVTRGHM
FT                   GGANTMYAIDAPPEL"
XX
SQ   Sequence 1919 BP; 567 A; 486 C; 343 G; 523 T; 0 other;
     atggaaagat caactctgat taatttactt caattgcacc acttcgagcc aaaactcagt        60
     gttgaaggaa tcatagttgt gcacggaatt gcaggcactg ggaaaaccac tttacttagg       120
     actttatttt ctgcttaccc tagcttagtt ataggttcac ctaggccttg ctatttagat       180
     aaacaaaaca aaatttcaca agtttgctta tcttgctttc ccaataccca ttgtgatatt       240
     gtcgatgagt atcatttgct agaaagtttc cagaaccaaa attggctatc tttggtgacc       300
     cctgtcaatg cacatacatg agagacttag agtcccacat tacacttcct tcagaactca       360
     tagatttgga acgtcaactg ctgagatttt gaacaaactg tttgacctta atatagtctc       420
     agttaagaaa gaagacgaca tcgttgaatt ctttaaccct tttgaagttg accccactga       480
     gcatatctct gcctctgaag aagaagtctt ggacttcgtt tccgaccaag tggtgaccac       540
     tagctcagag gaactagcag gacttgagtt tgcagaaaca actttctact gcacaacatt       600
     gaccgcagct gttgctgaaa atcctgctaa gactttcatc tctctgacta gacacaccca       660
     caaactcacc attggggaac taaatgccag gtctaactcc tagagctgac ctcactgaca       720
     catacaaaat cattgccatt gctttcttgt tgtcagcctg catttacttc caaaatagcc       780
     actaccaacc tgttgctgga gacaacttgc accgtttgcc ttttggtggc caatatcaag       840
     acggcaccaa aaagatatct tattttccac aacagcagtc atactttcat tctggaaaca       900
     aattaaatgt cctcatactt atcttcattc tcacattggg tattgtcctc accaataaat       960
     ttagttttag ctttagtcgt actactcacc agcattcttg ctataacaca cattcagcaa      1020
     ccaacaatac acaaccattg tcaggtcatc attgacggtg ccgcaatagt cataacaaat      1080
     tgtgagaaca caccagaagt gcttaaagca atcaacttct ccccttggaa cgggttaagt      1140
     tttcctaaat ttgaaaatta aaattaatat tgagtgttca caaaaatcaa cttcaataaa      1200
     caatcatgcc tgacacaaca cctgttgctg ccacttcaag tgcaccaccc acagccaaag      1260
     atgctggtgc caaagctcct tctgacttct caaatcccaa tacagctcct agtctcagtg      1320
     atttgaagaa agtcaagtat gtctccaccg tgacctccgt ggccacacca gctgaaattg      1380
     aagccctagg caaaatcttc accgctatgg gccttgccgc caatgagact ggtccggcca      1440
     tgtgggatct agctcgtgca tatgctgacg tgcaaagttc taaatcggca cagctgattg      1500
     gagctacccc ttccaaccct gcactatcac gccgagccct tgctgctcag tttgatcgaa      1560
     tcaatataac ccccaggcaa ttttgcatgt actttgccaa agttgtttgg aacatacttc      1620
     tcgacagcaa cattccacca gcaaattggg ccaaacttgg ttaccaagaa gatacaaaat      1680
     ttgctgcatt tgacttcttc gatggagtca ccaaccctgc cagcctgcag cctgctgatg      1740
     gtcttattag gcagccaaat gagaaagaac tagctgctca ctccgtagct aagtacggcg      1800
     ccttggctag gcaaaagatc tccacaggta attatattac cacacttgga gaagtcacac      1860
     gtggacacat gggaggagct aacaccatgt acgcgataga cgcaccccct gaactttaa       1919
//