Dbfetch
ID FJ237615; SV 1; circular; genomic DNA; STD; VRL; 2750 BP. XX AC FJ237615; XX DT 02-OCT-2009 (Rel. 102, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Tomato leaf curl Sulawesi virus isolate FI04-1No1-1 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato leaf curl Sulawesi virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2750 RX DOI; 10.1094/PDIS-93-3-0321C. RX AGRICOLA; IND44200950. RA Tsai W.S., Shih S.L., Green S.K., Lee L.M., Luther G.C., Ratulangi M., RA Sembel D.T., Jan F.-J.; RT "Identification of a New Begomovirus Associated with Yellow Leaf Curl RT Diseases of Tomato and Pepper in Sulawesi, Indonesia"; RL Plant Dis. 93(3):321-321(2009). XX RN [2] RP 1-2750 RA Tsai W.S., Shih S.L., Luther G.C., Ratulangi M., Sembel D.T., Lee L.M., RA Green S.K.; RT ; RL Submitted (26-SEP-2008) to the INSDC. RL Virology, AVRDC-The World Vegetable Center, PO BOX 42, Shanhua, Tainan, RL Taiwan 74199, ROC XX DR MD5; 4f65688cfd18276e039c9b782323a880. XX FH Key Location/Qualifiers FH FT source 1..2750 FT /organism="Tomato leaf curl Sulawesi virus" FT /segment="DNA-A" FT /isolate="FI04-1No1-1" FT /mol_type="genomic DNA" FT /country="Indonesia:Tompaso, North Sulawesi" FT /db_xref="taxon:634441" FT CDS 118..480 FT /codon_start=1 FT /product="V2" FT /note="pre-coat protein" FT /db_xref="GOA:C9WBG3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C9WBG3" FT /protein_id="ACO83235.1" FT /translation="MANMWDPLIHPFPDTLHGFRCMLAIKYLQSFECKYSPDTVGREFI FT RDLICILRCKNYAEAFHRYSVVTANVYNTPEAKLRESVQSPCSCPHCPRHVIQKTCLDG FT SSNVSETQILPGQKEQ" FT CDS 287..1063 FT /codon_start=1 FT /product="V1" FT /note="coat protein" FT /db_xref="GOA:C9WBG4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C9WBG4" FT /protein_id="ACO83232.1" FT /translation="MPKRSIDTVSSLPMSITRRRLNYGSQFSLPAAVPTAPGMSYKRRA FT WTGRPMYRKPRFYRARRSSDVPRGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGGGIT FT HRVGKRFCVKSVYILGKVWMDENIKTKNHTNNCMFWLVRDRRPYGTPQDFGQVFNMYDN FT EPSAATVKNDLRDRFQVLHRFTAMVTGGQYASKEQAIVKKFYKVNNYVVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN" FT CDS complement(1060..1470) FT /codon_start=1 FT /product="C3" FT /db_xref="GOA:C9WBG5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C9WBG5" FT /protein_id="ACO83233.1" FT /translation="MAVDLRTGEYITATQVQSGVYIWMVPNPLYFKVLKHKTRSFNNSW FT DYIEIQIQFNHNLRRALGIHKCFLIFRIWTHLRPLTWHFLRVFKYNVCKFLNSLGVVSV FT NNVIRAVDHVLWNVIQETMYVDMLHIIKFNLY" FT CDS complement(1205..1612) FT /codon_start=1 FT /product="C2" FT /db_xref="GOA:C9WBG6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C9WBG6" FT /protein_id="ACO83234.1" FT /translation="MQPSSPSTSRYIQVPQKVQHKIAKKKIIRRRRIDLDCGCSYYLSI FT NCHGCGFTHRGVHHCNSGAEWRLYLDGPKSPLFQGAEAQNQIVQQQLGLHRNPDPVQPQ FT PQESSGDSQMFFNLPHLDSFTSSDLAFFKSI" FT CDS complement(1551..2600) FT /codon_start=1 FT /product="C1" FT /note="replication-associated protein" FT /db_xref="GOA:C9WBG7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C9WBG7" FT /protein_id="ACO83231.1" FT /translation="MPRQPSFCVSAKNIFLTYPQCSLSKETVLENILGISCPSDKIFIR FT VSQEKHQDGSLHIHALVQFKGKAKFRNARHFDISHPNSSRSFHPNFQGARSSSDVKSYI FT QKDGDYVDWGCFQIDGRSARGGQQAANDVVAAALNAASKEEALNIIREKLPRDFLFQFH FT NLNANLDKLFKPQQQIYVSPFSRDSFNNVPHILVQWAVNNVVDAAARPWRPISIVIEGD FT SRTGKTMWARSLGRHNYLCGHLDLSPKVYCNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPSSSYKEYLEEEKNRGLKDWATKNATFISLDEPL FT YTSTPESST" FT CDS complement(2186..2443) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C9WBG8" FT /protein_id="ACO83236.1" FT /translation="MGLCTSMLWSNSKVKPSLEMQDISTYPILILADHSTPIFREQDLH FT PMSSRTFRRTAITSTGVVFRSMEDLLEEVNRQQTMLLQRR" XX SQ Sequence 2750 BP; 781 A; 548 C; 592 G; 829 T; 0 other; accgagggcc gcgaaatttt tttccgtaat gtggtccact ttgactggcc aatcacattt 60 gagcttcaaa gcttagttag tgcggaccgc actataaaac ttggggacca cgaaataatg 120 gcaaacatgt gggatcctct aattcatccc tttcctgaca ctctgcacgg atttcgatgt 180 atgctggcaa taaagtactt acaatccttc gagtgtaagt attctcccga tactgttggg 240 cgtgaattta tcagggatct tatttgcatt ttgaggtgca aaaactatgc cgaagcgttc 300 catagataca gtgtcgtcac tgccaatgtc tataacacgc cggaggctaa attacgggag 360 tcagttcagt ctccctgcag ctgtccccac tgccccaggc atgtcataca aaagacgtgc 420 ttggacgggt cgtccaatgt atcggaaacc cagattttac cgggccagaa ggagcagtga 480 tgttcctcgt ggatgtgaag gaccttgtaa ggtccagtcg tatgaacaga gacatgatat 540 ttctcatgtc ggtaaggtat tgtgtgtcag tgatgtaacc aggggaggtg gtataacgca 600 tagggtaggt aaacgttttt gtgttaagtc tgtgtacata ctaggtaaag tgtggatgga 660 tgagaatatc aaaaccaaaa accataccaa caactgtatg ttctggttag ttagggatag 720 gaggccttat ggcactcctc aagactttgg tcaggttttt aatatgtatg ataacgaacc 780 aagtgctgca accgtgaaga atgatctgcg tgatcgattc caagtgcttc atcgatttac 840 agctatggtt accggtggtc aatatgctag caaggagcaa gcaatcgtga agaagtttta 900 caaggtgaac aactacgtcg tctataatca tcaggaagct gctaaatatg aaaatcacac 960 ggagaatgcg ttgttattgt atatggcatg tactcatgcc tctaatcctg tgtatgctac 1020 gttgaagata cgcatatatt tctatgacaa tgtaacaaat taatataaat tgaattttat 1080 tatatgaagc atgtctacat acatggtttc ctgtatcaca ttccataaga catgatcaac 1140 tgctctaata acattattta ctgacacaac acccaaacta ttcagaaatt tacatacatt 1200 atatttaaat actcttaaaa aatgccaagt cagaggacgt aaatgagtcc aaatgcggaa 1260 gattaaaaaa catttgtgaa tccccagagc tctcctgagg ttgtggttga actggatctg 1320 gatttctatg tagtcccagc tgttgttgaa cgatctggtt ttgtgcttca gcaccttgaa 1380 atagagggga tttgggacca tccagatata aacgccactc tgcacctgag ttgcagtgat 1440 gtactcccct gtgcgtaaat ccacagccat gacagttaat gctgagatag tatgagcatc 1500 cacaatctaa atcaatgcgt cttcgtctga tgattttctt ttttgcaatt ttatgttgaa 1560 ctttctgggg tacttgtata taacggctcg tcgagggaga tgaaggttgc attttttgta 1620 gcccagtctt ttagtcctct atttttttct tcttccagat attctttata cgaagaagat 1680 ggacctggat tgcagaggaa gatagtggga atgccacctt taatttgaat tggctttccg 1740 tactttgtgt tgctttgcca gtccctctgg gcccccatga attctttaaa gtgctttagg 1800 taatgcgggt cgacgtcatc aatgacgtta taccaagcat cattgcaata cacctttgga 1860 ctaagatcaa gatggccgca caagtaatta tgcctaccaa gggatcttgc ccacatagtt 1920 ttaccagttc tagaatcacc ttcaatcaca atactgatgg gcctccatgg ccgcgcagct 1980 gcgtcaacaa cattatttac agcccactgt accaatatat gaggaacatt attaaatgaa 2040 tctcgactaa atggactaac ataaatttgt tgttgtggtt taaagagttt atctagattt 2100 gcatttaaat tgtgaaattg aaaaagaaag tctctgggaa gtttttctct aattatgttc 2160 aacgcttcct ctttggaagc agcatttaac gccgctgcaa caacatcgtt tgctgcctgt 2220 tgacctcctc tagcagatct tccatcgatc tgaaaacaac cccagtcgac gtaatcgccg 2280 tccttctgaa tgtacgactt gacatcggat gaagatcttg ctccctgaaa attggggtgg 2340 aatgatctgc tagaattagg atgggatatg tcgaaatgtc ttgcatttct aaacttggct 2400 ttacctttga attggaccaa agcatggatg tgcagagacc catcttggtg tttctcctga 2460 gaaaccctaa tgaagatttt gtccgaaggg catgaaatcc ctaggatgtt ctccagaaca 2520 gtttctttag acagactaca ctggggatat gtgagaaata tattcttagc actcacgcag 2580 aaagaaggct gacgtggcat ggctattggg gacttcacta actctataca atgggggaca 2640 atggggactc atatatacta gagtccctta atggcataat ggtaattagg tagagttact 2700 ttaatttgaa atttaatttt ttttcccaaa agcggccctc gtataatatt 2750 //