ID   FJ236810; SV 1; linear; genomic RNA; STD; VRL; 615 BP.
XX
AC   FJ236810;
XX
DT   31-OCT-2008 (Rel. 97, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Tomato necrotic spot virus isolate Yolo County capsid protein (CP) gene,
DE   complete cds.
XX
KW   .
XX
OS   Tomato necrotic spot virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus; unclassified Ilarvirus.
XX
RN   [1]
RP   1-615
RX   DOI; 10.1094/PDIS-93-5-0546C.
RX   AGRICOLA; IND44237901.
RA   Batuman O., Miyao G., Kuo Y.-W., Chen L.-F., Davis R.M., Gilbertson R.L.;
RT   "An Outbreak of a Necrosis Disease of Tomato in California in 2008 was
RT   Caused by a New Ilarvirus Species Related to Parietaria mottle virus";
RL   Plant Dis. 93(5):546-546(2009).
XX
RN   [2]
RP   1-615
RA   Batuman O., Chen L.-F., Kuo Y.-W., Gilbertson R.L.;
RT   ;
RL   Submitted (25-SEP-2008) to the INSDC.
RL   Plant Pathology, University of California Davis, One Shields Ave., Davis,
RL   CA 95616, USA
XX
DR   MD5; 75c3505522b8191a20e2d9d223572f3a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..615
FT                   /organism="Tomato necrotic spot virus"
FT                   /segment="RNA 3"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="Yolo County"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:California"
FT                   /db_xref="taxon:568804"
FT   gene            1..615
FT                   /gene="CP"
FT   CDS             1..615
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="capsid protein"
FT                   /db_xref="GOA:B6V6I9"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="InterPro:IPR016405"
FT                   /db_xref="UniProtKB/TrEMBL:B6V6I9"
FT                   /protein_id="ACI96015.1"
FT                   /translation="MSANQGNGGQVSNRQRRNARRAAAYRNSQKTDARIPLPVPVIPVS
FT                   RSSGSRSSLKLPNNQVWVCKASSELGAKTSDANDAISLTTMLSGIQEIKPETKIYRLVF
FT                   GFVAESDGSFGVVDDENVSGNVVPDPPVVGRVGFKKHTYKCRDVNLEGKTPDELKNKAV
FT                   VWCLDENRKAAKRIALTHYWFAISRPPPLMPPEDILVDGNQ"
XX
SQ   Sequence 615 BP; 152 A; 146 C; 168 G; 149 T; 0 other;
     atgtctgcga atcaagggaa cggtggacaa gtttcgaacc gccagcgcag gaatgctcgc        60
     cgcgctgctg cctaccgtaa cagtcagaag actgacgcta ggattccatt gccggtacct       120
     gttataccgg tttcccgatc tagcggatcg aggtcgtcgt tgaagctccc aaataatcaa       180
     gtttgggttt gtaaagcttc cagtgagttg ggtgccaaga cctctgatgc caatgacgct       240
     atttccctga ccaccatgct gagtggtatt caggagatca aaccggagac gaagatttac       300
     cgtctcgtat ttgggtttgt tgccgaatcc gatggttcct ttggagtcgt cgatgacgag       360
     aatgtttcag gtaatgttgt gccagatccg cccgttgttg gtcgggtagg ttttaagaag       420
     cacacctaca aatgccgaga tgtgaatctc gaaggtaaaa cgccagacga gctgaaaaat       480
     aaggccgtgg tttggtgtct tgacgagaac cgcaaagctg ccaagcgcat agcgctgacg       540
     cactactggt ttgcgatatc ccgaccacca ccgttgatgc ccccagaaga cattctggtg       600
     gatggaaatc aatga                                                        615
//