ID FJ213931; SV 1; circular; genomic DNA; STD; VRL; 2601 BP. XX AC FJ213931; XX DT 15-OCT-2008 (Rel. 97, Created) DT 28-JAN-2011 (Rel. 107, Last updated, Version 3) XX DE Tobacco yellow crinkle virus segment A, complete sequence. XX KW . XX OS Tobacco yellow crinkle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2601 RA Fiallo-Olive E., Rivera-Bustamante R.F., Martinez-Zubiaur Y.; RT "Tobacco yellow crinkle virus, a new bipartite begomovirus infecting RT tobacco and pepper in Cuba"; RL New Dis. Rep. 19:10-10(2009). XX RN [2] RP 1-2601 RA Fiallo-Olive E., Martinez-Zubiaur Y., Rivera-Bustamante R.F.; RT ; RL Submitted (16-SEP-2008) to the INSDC. RL Departamento de Ingenieria Genetica, Centro de Investigacion y de Estudios RL Avanzados del IPN- Unidad Irapuato, Km 9.6 Libramiento Norte, Irapuato, RL Guanajuato 629, Mexico XX DR MD5; c0a735ee8dbf1c79e3a26dd417f25eac. XX FH Key Location/Qualifiers FH FT source 1..2601 FT /organism="Tobacco yellow crinkle virus" FT /segment="A" FT /host="Nicotiana tabacum" FT /lab_host="Nicotiana benthamiana" FT /lab_host="Phaseolus vulgaris" FT /mol_type="genomic DNA" FT /country="Cuba" FT /collection_date="Jan-2007" FT /db_xref="taxon:565052" FT gene 164..919 FT /gene="AV1" FT CDS 164..919 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B6E950" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B6E950" FT /protein_id="ACI43931.1" FT /translation="MPKRDAPWRSMAGTSKVSRNANYSPRTAMGPKFDKAAAWVNRPMY FT RKPRIYRTLRSPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPQDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT gene complement(916..1314) FT /gene="AC3" FT CDS complement(916..1314) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancement protein" FT /db_xref="GOA:B6E951" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B6E951" FT /protein_id="ACI43932.1" FT /translation="MDSRTGESITAAQAENSVFIWETPNPLYFKIHHVENPLYTRTRIY FT HIEVRFNYNLRKALGLHKAFFNFQVWTTSMTASGQRYLSRFKLLVMSYLDSLGVIGINN FT VIRAVRFATDKSYVTDVLENHEIKFKIY" FT gene complement(1061..1450) FT /gene="AC2" FT CDS complement(1061..1450) FT /codon_start=1 FT /gene="AC2" FT /product="transactivator protein" FT /db_xref="GOA:B6E952" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B6E952" FT /protein_id="ACI43933.1" FT /translation="MLNSSPLKPPSIKAQHRIAKKRAVRRRRIDLNCGCSIFLHINCAD FT NGFTHRGEHHCGSGREFRFYLGDSKSPLFQDTPRREPVVHENQDLPHRSPVQLQPSESV FT GSPQSLLQFPSLDDFDDSFWAEIFK" FT gene complement(1392..2447) FT /gene="AC1" FT CDS complement(1392..2447) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="GOA:B6E953" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6E953" FT /protein_id="ACI43934.1" FT /translation="MPSVKRFRINAKNYFITYPKCSLTKEDALSQLQNLNTPVNKKFIK FT VCRELHENGEPHLHVLIQFEGKYTCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLQWGDFQIDGRSARGGCQSTNDTYAKALNASSAEEALMIIKEEQPQHFFLQHH FT NLVANAHRIFQKAPEPWVPPFQLSSFTNVPDEMSSWADEYFGRSSAARPERPISIIIEG FT DSRTGKTMWARALGPHNYLSGHLDFNSKVFSNDVEYNVIDDIAPHYLKLKHWKELIGAQ FT RDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKCFLDKEENAPLRAWTIKNAKFITLE FT APLYQSTAQDC" FT gene complement(2033..2290) FT /gene="AC4" FT CDS complement(2033..2290) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B6E954" FT /protein_id="ACI43935.1" FT /translation="MGSLISMCSYNSKGNIHARITDSSTWSPQPGQHISIRTYRELNLA FT PTSSPTSTRTEIHCNGEISRSTAEVLEEAANLLTIHMPRR" XX SQ Sequence 2601 BP; 686 A; 553 C; 612 G; 750 T; 0 other; accggatggc cgcgcgcccc ctagtcctac gtgggaccac gcataaaatg aaatttgaaa 60 caaccaatca catgccgcct gacaaggtta gatattatga cttggtgacc aagttgtggg 120 cctatataac gttatgagat ttcattttat gctttaattc gaaatgccta agcgggatgc 180 cccgtggcgt tctatggccg ggacctctaa ggtgtcccgc aatgccaact attcaccccg 240 tacagctatg ggccctaaat ttgataaggc cgctgcttgg gttaataggc ccatgtacag 300 gaagcccagg atttatcgga cgttgagaag cccagatgtt ccaagaggct gtgaagggcc 360 ttgcaaagtc cagtcttatg agcagcggca tgatatttca catgttggca aggtgatgtg 420 tatttcggac gtgacacgtg gtaatggtat tacccatcgt gttggcaagc gtttttgcgt 480 gaagtccgtg tacattttgg gcaagatatg gatggacgag aatatcaagc tcaagaacca 540 taccaacagc gtcatgtttt ggttggtcag agacaggaga ccatatggca cccctcagga 600 ttttggccaa gtgttcaaca tgttcgacaa cgagcccagt actgctactg tgaagaacga 660 tcttcgtgat cgttatcaag tcatgcacaa gttctacgca aaggttacag gtggacagta 720 tgcgagtaac gagcaggcgt tagtgaagcg tttctggaag gtgaacaatt acgtggtgta 780 caaccaccaa gaagcaggca aatacgagaa tcatacggag aacgctttgt tattgtatat 840 ggcatgtact catgcctcta atcccgtgta tgcgacattg aaaattcgga tctattttta 900 tgattcgata ttaaattaat aaattttgaa ttttatttca tgattctcaa gtacatcagt 960 tacatacgat ttgtctgttg cgaaacgaac agctctaatt acattgttta taccaataac 1020 gcctaaacta tctaaataag acattacaag taatttgaat ctacttaaat atctctgccc 1080 agaagctgtc atcgaagtcg tccaaacttg gaaattgaag aaggctttgt ggagacccaa 1140 cgctttccga aggttgtaat tgaaccggac ttcgatgtgg tagatcctgg ttctcgtgta 1200 caacgggttc tctacgtggt gtatcttgaa ataaagggga tttggagtct cccagataaa 1260 aacggaattc tctgcctgag ccgcagtgat gctctccccg gtgcgtgaat ccattatctg 1320 cgcagttgat gtggaggaag atagaacacc cgcagttcaa atcaatgcgt cgtcgacgaa 1380 cagctctttt tttagcaatc ctgtgctgtg ctttgataga ggggggcttc aagggtgatg 1440 aatttagcat ttttaatagt ccacgctctt agtggtgcat tttcctcttt gtcgaggaaa 1500 catttataac tgctcccctc tcctggattg cacagcacga ttgatggtat gccaccttta 1560 atttgaactg gcttgccgta cttacagttt gattgccagt ccctttgggc ccctatgagt 1620 tctttccagt gctttagctt taaataatgc ggagcaatgt catcaatgac gttatactcc 1680 acatcattcg agaagacctt ggaattgaag tcgaggtgac cactcaaata attatgtggg 1740 cctaaagcac gcgcccacat ggttttgcct gttcgagaat caccttcaat tatgatacta 1800 ataggtctct ccggccgcgc agcggaactc cgaccaaaat actcatcggc ccatgaactc 1860 atctcgtctg gaacgttagt aaaggaggag agttgaaacg gaggaaccca tggttccgga 1920 gccttctgaa aaatccgatg agcattggca accaaattat gatgttgaag gaaaaaatgt 1980 tgaggctgct cttctttgat tatcatcagt gcctcttctg cagaagaggc atttaacgcc 2040 ttggcatatg tatcgttagt agattggcag cctcctctag cacttctgcc gtcgatctgg 2100 aaatctcccc attgcagtgt atctccgtcc ttgtcgatgt aggacttgac gtcggagcta 2160 gatttagctc cctgtatgtt cggatggaaa tgtgctgacc tggttgggga gaccaggtcg 2220 aagaatctgt tattcgtgca tgtatatttc ccttcgaatt gtatgagcac atggagatga 2280 ggctccccat tctcgtgaag ctctctgcac accttgataa acttcttgtt aacgggtgtg 2340 tttaggtttt gtaattggga aagtgcgtct tctttggtga gagagcactt gggataagtg 2400 atgaaatagt ttttggcatt tattctaaaa cgtttaactg atggcatttt tgtaatataa 2460 acgatgtcac cgaagggtgt caccgattcg gctctctcaa acttgctcat gcaatcggtg 2520 aaagagtgac aatatatact agaaccctca atagaacttt caatcgtgtt cgcacacgtg 2580 gcggccatcc gctataatat t 2601 //