ID FJ196838; SV 1; linear; genomic RNA; STD; VRL; 3030 BP. XX AC FJ196838; XX DT 03-FEB-2009 (Rel. 99, Created) DT 10-AUG-2011 (Rel. 109, Last updated, Version 2) XX DE Helleborus mosaic virus replicase polyprotein gene, partial cds; and triple DE gene block protein 1, triple gene block protein 2, triple gene block DE protein 3, capsid protein, and putative nucleic acid binding protein genes, DE complete cds. XX KW . XX OS Helleborus mosaic virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-3030 RX DOI; 10.1094/PDIS-93-4-0332. RX AGRICOLA; IND44222528. RA Eastwell K.C., duToit L.J., Druffel K.L.; RT "Helleborus net necrosis virus: A New Carlavirus Associated with 'Black RT Death' of Helleborus spp"; RL Plant Dis. 93(4):332-338(2009). XX RN [2] RP 1-3030 RA Eastwell K.C., duToit L.J., Druffel K.L.; RT ; RL Submitted (09-SEP-2008) to the INSDC. RL Department of Plant pathology, Washington State University, 24106 North RL Bunn Road, Prosser, WA 99350, USA XX DR MD5; 331a0bcd7da1968d19723a594b5e36b2. DR EuropePMC; PMC3689765; 23805334. XX FH Key Location/Qualifiers FH FT source 1..3030 FT /organism="Helleborus mosaic virus" FT /mol_type="genomic RNA" FT /country="Germany" FT /isolation_source="Helleborus niger" FT /db_xref="taxon:592207" FT CDS <1..387 FT /codon_start=1 FT /product="replicase polyprotein" FT /db_xref="GOA:B9UZ41" FT /db_xref="InterPro:IPR001788" FT /db_xref="UniProtKB/TrEMBL:B9UZ41" FT /protein_id="ACM45997.1" FT /translation="AGDDMCASRKLRTTTEHEGFLSKLKLKAKVAFTKTPTFCGWNLTH FT VGIFKKPQLVLERICIAKELNNLGNCIDNYALEVAFAYKLGESATCLMNEEELENHYQC FT VRTIVQNKHLIKSEVIKVYEKSQC" FT CDS 418..1122 FT /codon_start=1 FT /product="triple gene block protein 1" FT /db_xref="GOA:B9UZ42" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:B9UZ42" FT /protein_id="ACM45998.1" FT /translation="MNCVYDILIEFGFHRFSNHHSEPFVVHCVPGAGKSTAIRKILSCL FT PEARAYTFGVCDPPSVCTCRIQGVREWDQATSTEFTIVDEYTEGDYIKLQPKLVFGDPC FT QSEHLSRVLRPHYTCLTTKRFGAETCAILRKLKFQIFSEKCDTVLQVGIFEGEPEGQVV FT AFEDEVKTLLNSHNCEYKGLCEIRGETYKCVTFVTATVGVPKQDIEKFFLCLTRHSEKL FT VILSPDAAFASC" FT CDS 1100..1432 FT /codon_start=1 FT /product="triple gene block protein 2" FT /db_xref="GOA:B9UZ43" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:B9UZ43" FT /protein_id="ACM45999.1" FT /translation="MPLSPPADRTGVYLAGVVGVGVALALFVLTRSSLPHVGDNIHHLP FT HGGRYRDGTKSVDYCGPATRYPSSNLLSNRGGFGLLLFVVFLIFLIWLSDNFGNRNRCA FT RCNTIH" FT CDS 1432..1626 FT /codon_start=1 FT /product="triple gene block protein 3" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:B9UZ44" FT /protein_id="ACM46000.1" FT /translation="MRVEVAFFILSLAIVYALLLLTERRTLNDCIVVVTGESVTIRGCS FT FTTEFIEFAKGLKPYSHRV" FT CDS 1666..2577 FT /codon_start=1 FT /product="capsid protein" FT /db_xref="GOA:B9UZ45" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/TrEMBL:B9UZ45" FT /protein_id="ACM46001.1" FT /translation="MATATALKRTDFANDEAYNKALADAERARMPNVPSVHGSKQDYEL FT VGESDESLESRLANLKEYLMRQQKSKQFVNLGMEIGRPKLEPMAHLKPDMTNIFTRPTV FT DSLVKMQWREESGTVATAEELTEIAAKLQGLGVPPEEVAAVLWDISMYCASVSSSESMD FT PKGVVTFRSGGSIMRDAVVAITRDFSTLRKVCRAYAPVTWNRMILLDNPPANWQAKGFS FT SATKFAAWDCFDHVRNPACVQPQEGLIRIPTREEEIAHATHKEIALMKNARNDRFANTS FT SEITGGKFGCNVKKQWRESKCD" FT CDS 2568..2957 FT /codon_start=1 FT /product="putative nucleic acid binding protein" FT /db_xref="GOA:B9UZ46" FT /db_xref="InterPro:IPR002568" FT /db_xref="UniProtKB/TrEMBL:B9UZ46" FT /protein_id="ACM46002.1" FT /translation="MRLMEYGRVISLIMAFNKKATSPDGSVCDLALRIISMSPYVPNEP FT KCGTSTFAKKRRAKAIGRCHRCYRVAPGFYFTKNCDGYTCKPPISVNSEVRDYILLGKR FT RLLEAIEAQGYGLKSNLVKKELGIE" XX SQ Sequence 3030 BP; 830 A; 596 C; 777 G; 827 T; 0 other; gcgggggatg atatgtgtgc ctcaaggaaa ttgaggacaa cgactgaaca cgagggtttt 60 ttgagcaagc ttaaattgaa ggctaaagtt gctttcacta aaacgccaac cttctgtggt 120 tggaacttaa ctcacgtggg gattttcaag aaaccgcaac tcgttctaga gaggatatgc 180 atagccaaag aactgaataa tctgggaaat tgcattgata actatgccct tgaagtggct 240 ttcgcgtaca aacttggaga atctgcaaca tgcctcatga atgaggaaga attggaaaac 300 cattaccagt gtgtgcgaac cattgtccag aacaagcact tgataaagtc tgaagtcatc 360 aaggtttacg aaaaatcgca gtgttagctt aggtgttagc tcatagtttt gaaataaatg 420 aattgcgtgt atgatatatt aatagaattt ggtttccata gattttcaaa tcaccattcc 480 gaaccattcg tagtccattg cgtcccaggt gctggaaagt caacagctat tcggaagatc 540 ttgagttgct tgcctgaagc tcgagcgtac acttttgggg tctgcgaccc gcccagcgtt 600 tgcacttgta gaatacaagg ggttcgtgag tgggatcaag caacctctac tgagttcacc 660 attgtagacg agtacaccga gggtgattac attaaacttc agcccaaatt agtcttcggg 720 gatccttgcc agagtgagca cttgagtagg gttttgagac ctcattacac ttgtttgacc 780 acaaaacgct tcggtgcaga aacttgcgca attctgagga aactgaagtt tcaaattttc 840 tctgagaagt gtgacaccgt cttgcaggtg gggattttcg aaggtgaacc tgaaggtcaa 900 gtagtagcct tcgaggatga agtcaaaact ttgctgaact cacataactg cgagtacaag 960 ggattgtgcg aaatacgtgg tgaaacttac aagtgcgtta ctttcgtgac ggctactgtt 1020 ggggtgccca aacaagacat agaaaaattc tttctatgct tgacaaggca tagcgagaag 1080 ttagtcatac ttagcccgga tgccgctttc gcctcctgct gatcgtaccg gtgtgtattt 1140 ggctggggtt gttggggttg gggtagcact tgcacttttc gtactgacaa ggagtagttt 1200 accgcacgtt ggcgataata tacatcactt gccacacgga ggacgttacc gcgacggcac 1260 taagtctgtg gattactgcg gtccggccac aagatatccg agtagtaact tgctgtccaa 1320 tcgcgggggt tttggtttgc tgcttttcgt cgtgttccta atctttctaa tttggttatc 1380 agataatttc ggtaatcgaa atcgctgcgc caggtgcaat acaatccatt gatgcgggta 1440 gaagttgctt ttttcattct gtcgctggcc atagtgtacg cattacttct acttactgag 1500 cgtagaactc ttaatgattg catagtggtt gttaccgggg agtcagtgac cattcgcggc 1560 tgtagcttca caacagagtt tatcgaattt gctaaaggtc taaaacctta tagtcatagg 1620 gtttgattgg ttccttaggt tgtaagagta ttgattgata atcaaatggc aaccgcaact 1680 gctttgaaga gaactgactt tgctaatgat gaagcatata acaaagcact cgctgatgcc 1740 gaacgtgcca gaatgcccaa cgtgccaagc gtccatggat ccaagcaaga ttatgaattg 1800 gtgggtgaaa gtgatgaatc actcgaatca cgcctcgcga acttgaaaga atacttgatg 1860 cgacagcaga agtccaaaca gttcgtaaac ttgggcatgg aaattggtag gcccaaactc 1920 gagcccatgg cgcatttaaa gcctgacatg acaaatatct ttactcgtcc aactgttgat 1980 tcactggtga agatgcaatg gagagaagaa tccgggactg tggccactgc ggaagaactg 2040 actgagattg cggccaaatt gcaaggtttg ggagtgccac ctgaggaggt tgctgcagtt 2100 ttatgggaca tctcaatgta ctgtgcgtca gttagctcat ctgaatcaat ggaccctaag 2160 ggtgtggtga ctttcaggtc tggtggatct atcatgaggg atgctgtggt ggcgattact 2220 cgggacttta gcacacttag aaaagtttgc agagcttatg cgccagtcac atggaatcga 2280 atgatacttt tggacaaccc acctgctaac tggcaggcta agggcttctc gagtgctacg 2340 aaattcgctg catgggattg tttcgatcat gtgcgcaatc ctgcctgcgt gcaaccgcaa 2400 gaaggtttga ttcggatccc tactcgggag gaagagatag cccatgcaac acataaggag 2460 atcgctctta tgaagaatgc tagaaatgat aggttcgcta acacttccag cgagatcact 2520 gggggcaagt tcggctgcaa tgttaaaaag caatggcgtg aatcgaaatg cgattgatgg 2580 agtacggtag ggtgattagt ttgattatgg ctttcaataa aaaggccacg tcccctgacg 2640 ggtcagtgtg tgatttagcg cttaggatta ttagtatgtc tccatatgtg cccaatgagc 2700 caaagtgtgg gacttctacg ttcgctaaga agcgtagggc caaggccatt ggtaggtgcc 2760 acaggtgcta cagggttgca ccggggttct attttactaa gaattgtgat ggttatacct 2820 gtaaaccacc gatttccgtg aacagtgaag tgagagatta cattttactt ggtaagcgta 2880 gactgcttga agcaatcgaa gctcaagggt acggactcaa aagtaatctc gtgaagaagg 2940 aactcggaat cgagtgatgc tacagtaaag cctaattaat aaataagctg tggcatgtta 3000 aataaaagat ttgcttttaa atattttggc 3030 //