ID   FJ183390; SV 1; linear; genomic RNA; STD; VRL; 1181 BP.
XX
AC   FJ183390;
XX
DT   01-MAY-2009 (Rel. 100, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Equine encephalosis virus isolate HS103/06 NS2 gene, complete cds.
XX
KW   .
XX
OS   Equine encephalosis virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RP   1-1181
RX   DOI; 10.1099/vir.0.009381-0.
RX   PUBMED; 19264638.
RA   Potgieter A.C., Page N.A., Liebenberg J., Wright I.M., Landt O.,
RA   van Dijk A.A.;
RT   "Improved strategies for sequence-independent amplification and sequencing
RT   of viral double-stranded RNA genomes";
RL   J. Gen. Virol. 90(Pt 6):1423-1432(2009).
XX
RN   [2]
RP   1-1181
RA   Potgieter A.C., Wright I.M., van der Sluis R.;
RT   ;
RL   Submitted (05-SEP-2008) to the INSDC.
RL   Virology, ARC-Onderstepoort Veterinary Institute, 100 Old Soutpan Road,
RL   Pretoria, Gauteng 0110, South Africa
XX
DR   MD5; 91cef6217bd510b51c5275ffdeb38447.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1181
FT                   /organism="Equine encephalosis virus"
FT                   /isolate="HS103/06"
FT                   /serotype="Bryanston"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /db_xref="taxon:201490"
FT   CDS             41..1129
FT                   /codon_start=1
FT                   /product="NS2"
FT                   /db_xref="GOA:C3TUR0"
FT                   /db_xref="InterPro:IPR007602"
FT                   /db_xref="InterPro:IPR037194"
FT                   /db_xref="UniProtKB/TrEMBL:C3TUR0"
FT                   /protein_id="ACJ06240.1"
FT                   /translation="MQTEKMEKPRRFTRTVCILDRTENTYAGKVSKMMRNPYFIIKAGR
FT                   SVVTGTAPFPPPRSTVIEVGDECAVAIQDGTDVTYIQLTRETVELCVERWNEYKFETLN
FT                   PTSNVGRINIGGSDVLGEIKYAKAQSLIKPYTRNASRSSDMPNLPGLTPTDIDVRTHRD
FT                   EDRKNREEGRARLENALRGANLGASSRLFGVDAAPCIDVPVRTLEIQKPDLGRSQDWNL
FT                   SFDSNPGSRSMSPLSAHYTGLKKVEPERPSPFMVQEDSLEQDEEPLDVMTSQFIKLNSD
FT                   FSKAYGTSPMLSSLTQKLACKSMRFEKFVTNVMINSENVPLFTIDQSSGNAVLKGMGEC
FT                   SSAAVVVSGGSYFVLPAGGIDL"
XX
SQ   Sequence 1181 BP; 359 A; 233 C; 308 G; 281 T; 0 other;
     gttaaatttg agtcgaaaac gcacaagatg gcctcaaaaa atgcaaactg agaaaatgga        60
     gaaacccaga agatttacac gcactgtatg tattcttgac agaaccgaga atacgtatgc       120
     tggaaaagta tcaaaaatga tgagaaaccc ttattttatc attaaagcgg ggcggtcagt       180
     agtcactggt accgctccgt ttccaccacc aagaagtaca gtcatagaag ttggtgatga       240
     gtgcgctgta gcgattcagg atggaacgga cgttacatat atacaactga cgagggagac       300
     ggttgaactg tgtgttgaga gatggaatga gtataaattt gaaacactga atccaacttc       360
     taatgtgggc aggatcaaca ttggcggatc tgatgttttg ggagaaataa agtatgcgaa       420
     agcccagtca ttgataaaac catacaccag gaacgcatcg agatccagtg acatgccgaa       480
     cttgccagga ttaacaccaa ccgatataga cgtcagaact catcgagatg aggacaggaa       540
     gaacagggag gagggcagag ccagattgga aaacgcactt aggggtgcga acctcggtgc       600
     tagttcacgt ttattcggag tagatgcagc gccgtgcatt gatgtacctg tgcgcacgtt       660
     ggagatacag aaacccgatc tagggagatc tcaggactgg aatttatctt ttgactcgaa       720
     cccgggctct cgatcgatgt caccgctaag cgcgcattac accggattaa agaaggtgga       780
     gcctgaacgc ccatcgccct ttatggtcca ggaagatagt ctagagcaag atgaggagcc       840
     gttagacgtg atgacgtccc agttcatcaa gttgaacagt gatttttcaa aagcgtatgg       900
     aacatcgccg atgctgtcct cgctcactca gaagcttgca tgcaaaagca tgagatttga       960
     aaaattcgtc acaaatgtca tgatcaattc agagaatgta cctttgttta caatagatca      1020
     atcaagtggg aatgcagtgt taaagggaat gggtgaatgt tcctcagctg cagtggttgt      1080
     cagcggcggt tcctacttcg tgcttcctgc agggggtatt gacctttaaa tggtagctcc      1140
     tggttgtagc aggtgtaagt aggatagact caaatcgtta c                          1181
//