ID   FJ183389; SV 1; linear; genomic RNA; STD; VRL; 1607 BP.
XX
AC   FJ183389;
XX
DT   01-MAY-2009 (Rel. 100, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Equine encephalosis virus isolate HS103/06 VP5 gene, complete cds.
XX
KW   .
XX
OS   Equine encephalosis virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RP   1-1607
RX   DOI; 10.1099/vir.0.009381-0.
RX   PUBMED; 19264638.
RA   Potgieter A.C., Page N.A., Liebenberg J., Wright I.M., Landt O.,
RA   van Dijk A.A.;
RT   "Improved strategies for sequence-independent amplification and sequencing
RT   of viral double-stranded RNA genomes";
RL   J. Gen. Virol. 90(Pt 6):1423-1432(2009).
XX
RN   [2]
RP   1-1607
RA   Potgieter A.C., Wright I.M., van der Sluis R.;
RT   ;
RL   Submitted (05-SEP-2008) to the INSDC.
RL   Virology, ARC-Onderstepoort Veterinary Institute, 100 Old Soutpan Road,
RL   Pretoria, Gauteng 0110, South Africa
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DR   MD5; 91dabfea8c59cb029839ea46f8523897.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1607
FT                   /organism="Equine encephalosis virus"
FT                   /isolate="HS103/06"
FT                   /serotype="Bryanston"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /db_xref="taxon:201490"
FT   CDS             19..1566
FT                   /codon_start=1
FT                   /product="VP5"
FT                   /db_xref="GOA:C3TUQ9"
FT                   /db_xref="InterPro:IPR000145"
FT                   /db_xref="UniProtKB/TrEMBL:C3TUQ9"
FT                   /protein_id="ACJ06239.1"
FT                   /translation="MGRFTKMLSRAGGAIKKAVTSQGAKKMYSALGEMAIKAANSEIGQ
FT                   AAMEGLVQGTIQSAIEGGSYGSNIKQAMLLSVAGRLDAPPDPTSPGEVAMRNAIIKLKA
FT                   EEEEDRVFEKHNEAISRIVGEDVMKLRDIVKKGEVVQGDEIKTVETALEGLIRLNEKRT
FT                   MDISQLTDAINKERVDRNEDEREMVDNYMDNIHQIKHALEVEQEAMHEEAIQEGLDMAA
FT                   EVLEHASEEVPIVGAGLATAAASARAIEGGLKVKEVINKIMGVDLTHIGHKPVLPSTIS
FT                   TIIQNRGKQIDERQMVRSLIEKKNILEEERREVEHIRSEVLPKFKQAVSENGEAWHPKL
FT                   ARTTYIPMTQKPKIHVYSAPYDSDDIMIVKALSPHHAGLGFFIGFDLALDFVHFVDIHP
FT                   ESHVLRGGGIEVAGPSFSSAYREFFDIASNSDDVSTVQRRRLQRSGREHPIYVGSFDYD
FT                   ISYDMLKSNALSLVHNDDLQMHVLRGPKHLQRRMIMAAMMHGVEIIKPPESGFLSFW"
XX
SQ   Sequence 1607 BP; 503 A; 275 C; 471 G; 357 T; 1 other;
     gtttattttt ccgtgatcat ggggcgtttc actaagatgc tatcacgcgc ggggggcgcg        60
     ataaagaaag ctgttacatc gcagggtgcg aaaaagatgt atagtgcact gggagaaatg       120
     gcaattaagg cagcgaattc agagattgga caagcggcga tggagggact agtacaaggg       180
     accattcaga gtgcaattga gggagggagc tacggaagta atattaaaca ggcgatgctg       240
     ttaagtgtgg cgggaaggct agatgcgcct ccggacccta ccagtcctgg agaagtagcc       300
     atgagaaatg caattataaa gctgaaggcg gaagaggagg aggatagagt gttcgagaaa       360
     cataatgagg caatcagcag aatcgttggg gaagatgtca tgaagctgcg tgatatagtt       420
     aagaagggtg aagttgtgca aggtgatgag attaaaacgg ttgagaccgc gctggaaggg       480
     ttaataaggt taaatgagaa gcgcacaatg gatatttcac agctaacaga tgcaatcaat       540
     aaagagagag tggatcgtaa tgaagacgaa cgtgaaatgg ttgataacta tatggataat       600
     attcatcaga taaaacatgc tttggaggtg gaacaggaag cgatgcacga ggaggcgata       660
     caggaaggat tagatatggc ggcagaggta ttggagcacg cgtcagagga ggttcccatc       720
     gttggagcgg ggttagcgac ggctgcggcg agtgcacgcg ccatagaggg ggggttgaaa       780
     gttaaagaag tgattaacaa aataatgggg gtcgatttga ctcatatcgg ccataaaccc       840
     gtattgcctt ctacaatatc gactataata caaaatagag gaaaacagat tgatgaacga       900
     caaatggtca gatcgctgat agaaaagaaa aacattttag aggaggaacg tcgggaggtc       960
     gaacacatca ggagtgaagt gttaccgaag tttaaacaag cagtcagtga gaatggagag      1020
     gcgtggcatc cgaagctagc gagaacgaca tacataccaa tgacccagaa gccgaaaatc      1080
     catgtgtatt cagcaccgta cgatagcgat gacataatga tagtaaaggc gttatcacca      1140
     catcatgcag gattagggtt yttcattgga tttgatttag cgttggactt tgttcatttt      1200
     gtcgatatac atccggagag ccacgttttg cgtgggggag gtatagaagt ggcggggccg      1260
     tccttctcat ccgcatatag ggaattcttc gacatagcgt caaattcgga tgatgtgtca      1320
     actgtgcaac ggcgacggct gcagcgtagc ggcagagagc acccaatata cgttggcagt      1380
     tttgattatg acattagtta tgacatgctt aaatcgaatg cgctaagttt agtccataac      1440
     gatgatttac aaatgcacgt tttgcggggt ccaaaacacc tacagcgtcg aatgattatg      1500
     gcggcgatga tgcacggcgt tgagatcata aagccccccg aaagcggctt tctgagcttc      1560
     tggtagaaac atggatggca ccactcgtga aacggaaaaa acgttac                    1607
//