ID   FJ183388; SV 1; linear; genomic RNA; STD; VRL; 1749 BP.
XX
AC   FJ183388;
XX
DT   01-MAY-2009 (Rel. 100, Created)
DT   03-JUN-2009 (Rel. 101, Last updated, Version 2)
XX
DE   Equine encephalosis virus isolate HS103/06 NS1 gene, complete cds.
XX
KW   .
XX
OS   Equine encephalosis virus
OC   Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus.
XX
RN   [1]
RP   1-1749
RX   DOI; 10.1099/vir.0.009381-0.
RX   PUBMED; 19264638.
RA   Potgieter A.C., Page N.A., Liebenberg J., Wright I.M., Landt O.,
RA   van Dijk A.A.;
RT   "Improved strategies for sequence-independent amplification and sequencing
RT   of viral double-stranded RNA genomes";
RL   J. Gen. Virol. 90(Pt 6):1423-1432(2009).
XX
RN   [2]
RP   1-1749
RA   Potgieter A.C., Wright I.M., van der Sluis R.;
RT   ;
RL   Submitted (05-SEP-2008) to the INSDC.
RL   Virology, ARC-Onderstepoort Veterinary Institute, 100 Old Soutpan Road,
RL   Pretoria, Gauteng 0110, South Africa
XX
DR   MD5; e3fc5d220f785fcafd1226ab422618c4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1749
FT                   /organism="Equine encephalosis virus"
FT                   /isolate="HS103/06"
FT                   /serotype="Bryanston"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /db_xref="taxon:201490"
FT   CDS             39..1685
FT                   /codon_start=1
FT                   /product="NS1"
FT                   /db_xref="InterPro:IPR002630"
FT                   /db_xref="UniProtKB/TrEMBL:C3TUQ8"
FT                   /protein_id="ACJ06238.1"
FT                   /translation="MEQLTHRHAFTAEQINTLEYVGVLSPYVNCSHRRYPCLIKGQCCL
FT                   QHFTYVVDRLNEDGQRHEIDALNETYARWLADRENVWITLQRMVREEGVISTDKSRASL
FT                   VEELSRRFVEYGVQDRFNDLRYKKRPARVVVDEEKGAAHLFCIPMWQGNLSTIFEVTRF
FT                   RRIAAVVYDGDMVDSFASPLGRRSDDILQRIRRRVHQEIPNCPRTGEHGCISHVIFISS
FT                   HQRAILERGDETDRLFRIAESDAKMLRAHGSCVGERIAFQRYAVSNGGVEAVLNMFLTN
FT                   VPTPRGNMSLCMYMAQTPTDNVHNALFPLLIHKSVVLDGLACDMVFYFLAGTERCCGCF
FT                   LKSHGVQHISVIHTRLGDHNANPVMRARIANHKITNKEIQDMGYKESLITLNEHCFGVT
FT                   CLDVSEAIILSMVEMQKRIRGDGHWGVDSYTDAIISLFRTYVHWNPQGRDRIIMFRLIC
FT                   FCIFGAAPGQDGRFCDWDNYDRFADVINNGCHPTPETERVAHSLLLKFGVEAMRCVDVV
FT                   PLTALDTPVVAYGPIVEMDDIVSQFANMYYN"
XX
SQ   Sequence 1749 BP; 478 A; 335 C; 464 G; 472 T; 0 other;
     gttaaaagat ctgagtgtgt gggccgaaca ccaacacgat ggagcaatta actcatagac        60
     acgctttcac cgctgaacaa attaacacgc tagaatatgt aggtgtgctt tcgccatatg       120
     ttaactgctc tcatagaaga tatccgtgct taatcaaggg gcaatgttgc ttgcagcatt       180
     ttacttatgt tgttgaccga ctgaatgaag atggtcagcg gcatgaaata gatgctttaa       240
     atgagactta cgctaggtgg cttgctgata gagaaaatgt ttggataaca ttacagcgca       300
     tggttagaga ggagggagtg atatcaactg ataaatcaag agctagccta gttgaggaac       360
     tttcgcgcag gtttgtagaa tacggcgtac aagaccgctt caatgatctt cgctacaaga       420
     aaaggccagc tagagtcgtg gtggatgagg agaagggggc ggcgcatctt ttctgcatac       480
     caatgtggca gggtaattta agcacgatct tcgaggtaac acgctttaga cgcatagcgg       540
     ctgtggttta cgatggagat atggtggatt cgtttgcatc gccactgggg agaagaagtg       600
     atgacattct gcaaagaatc aggcgacgag ttcatcagga gatcccgaac tgtccaagga       660
     cgggagagca tgggtgtatt tctcatgtta ttttcatctc gagccaccag cgcgctattc       720
     tagagagggg ggatgagaca gacaggcttt tccgcattgc agaatcggat gcaaagatgc       780
     ttcgcgcgca tggatcttgt gtgggtgagc gtatcgcctt tcaacgctat gctgtcagta       840
     atggaggagt ggaagctgta cttaacatgt ttctaactaa cgtcccaact cctagaggga       900
     atatgtctct ttgtatgtac atggcgcaaa cgccgactga taatgttcac aatgctcttt       960
     tcccgctact aatacataaa agtgtcgtgt tggacggttt agcatgcgat atggtctttt      1020
     acttcttggc ggggacggaa agatgttgcg gatgtttttt gaagtcgcac ggagtacaac      1080
     acatcagtgt catacacaca cgattggggg atcacaacgc taacccagtg atgagggcaa      1140
     gaatcgcaaa tcacaaaatc actaataaag agattcagga tatgggctat aaggaatcgt      1200
     taataacact gaatgagcac tgctttgggg taacttgcct ggatgtctca gaggcgatta      1260
     tactgagcat ggttgaaatg cagaaaagaa taagaggaga tggccattgg ggggtagact      1320
     catacacgga cgccatcatt tcacttttta gaacatacgt ccactggaat ccgcagggta      1380
     gagacaggat tataatgttc aggctgatat gcttctgcat ctttggggcg gcgccgggac      1440
     aggatggtcg tttttgcgat tgggacaatt atgatcgttt tgccgatgtc attaacaatg      1500
     gatgtcaccc aacacctgag acagagagag tcgctcacag tttgttgctc aagtttggag      1560
     ttgaagctat gcgttgtgtt gatgttgttc ctctcacagc gctggatact cctgttgtgg      1620
     cctatggtcc tatagtggaa atggatgaca ttgtttctca gttcgccaac atgtattaca      1680
     actaaaacta acgatgtcag taggtgataa ggtttaggag ttattgtctt ccccagatct      1740
     tacacttac                                                              1749
//