ID FJ177031; SV 2; linear; genomic DNA; STD; VRL; 2746 BP. XX AC FJ177031; XX DT 30-SEP-2008 (Rel. 97, Created) DT 26-AUG-2010 (Rel. 105, Last updated, Version 4) XX DE Ageratum enation virus - Lucknow segment DNA-A, complete sequence. XX KW . XX OS Ageratum enation virus - Lucknow OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2746 RX DOI; 10.1007/s10327-010-0243-4. RX AGRICOLA; IND44407169. RA Raj S.K., Snehi S.K., Khan M.S., Tiwari A.K., Rao G.P.; RT "Detection of Ageratum enation virus from cat's whiskers (Cleome gynandra RT L.) with leaf curl symptoms in India"; RL J. Gen. Plant Pathol. 76(4):292-294(2010). XX RN [2] RP 1-2746 RA Raj S.K., Snehi S.K.; RT "First molecular evidence for Ageratum enation virus association with leaf RT curl disease of Cleome gynandra L. in India"; RL Unpublished. XX RN [3] RP 1-2746 RA Raj S.K., Snehi S.K.; RT ; RL Submitted (02-SEP-2008) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U. P. 226001, India XX RN [4] RC Sequence update by submitter RP 1-2746 RA Raj S.K., Snehi S.K.; RT ; RL Submitted (10-MAR-2010) to the INSDC. RL Plant Molecular Virology, National Botanical Research Institute, Rana RL Pratap Marg, Lucknow, U. P. 226001, India XX DR MD5; c39e74e1fb503d0363faac8a09a1684c. DR EuropePMC; PMC4353908; 25674770. XX CC On Mar 10, 2010 this sequence version replaced gi:206597716. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Ageratum enation virus - Lucknow" FT /segment="DNA-A" FT /host="Cleome gynandra L. (Hulhul)" FT /mol_type="genomic DNA" FT /country="India:Gomtinagar, Lucknow" FT /collected_by="Yashwant Singh" FT /collection_date="01-Aug-2008" FT /db_xref="taxon:500471" FT CDS 133..480 FT /codon_start=1 FT /product="AV2" FT /note="precoat protein" FT /db_xref="GOA:D3TTB6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3TTB6" FT /protein_id="ADD64690.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYYHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKS" FT CDS 293..1063 FT /codon_start=1 FT /product="AV1" FT /note="coat protein" FT /db_xref="GOA:B6DXF0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B6DXF0" FT /protein_id="ACI15834.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1060..1464) FT /codon_start=1 FT /product="AC3" FT /note="REn protein" FT /db_xref="GOA:B5APR2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B5APR2" FT /protein_id="ADD64691.1" FT /translation="MDSRTGELITAAQAENGVYTWENQNPLYFKITEHQNRPFLMKEDS FT ITVQIQFNYNLRKALEIHKCFLAYRIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISINN FT VIRAVDHVLWDVLEHIVYVDQSYSIKFNIY" FT CDS complement(1205..1609) FT /codon_start=1 FT /product="AC2" FT /note="TrAP" FT /db_xref="GOA:B5APR3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B5APR3" FT /protein_id="ADD64692.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGESKSPVFQDNRTPEPAISHERGQHHRPNTVQLQP FT EESVGDTQVFSSLPNLDDFTASDWAILKGL" FT CDS complement(1512..2597) FT /codon_start=1 FT /product="AC1" FT /note="replication associated protein" FT /db_xref="GOA:B5APR4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B5APR4" FT /protein_id="ADD64693.1" FT /translation="MAAPNRLKINAKNYFLTYPKCSLTKEEALFLLLNLQPPTNKKYIK FT IFRELHKDGSPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQRAKSSTDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFSPPLEVYISPFLSSSFDQVPEELEEWVSENVMVAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDEASTC" FT CDS complement(2183..2440) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B5APR5" FT /protein_id="ADD64694.1" FT /translation="MGALISMCSSSSKGNISARINDSSTWYPQTGQHISIRTFRELNPA FT PTSSPTSTRTETPSNGENSRSMEDLHEEVNRQLMMLLQKP" XX SQ Sequence 2746 BP; 732 A; 542 C; 624 G; 848 T; 0 other; accggatggc cgcgaatttt ttgtggcccc cgcaacgcat ttacatgtgg accaatgaaa 60 ttggctcctc gtggcttaat tgttttgtgg tcccttattt aaacttgctc accaagtagt 120 gcactccgca ctatgtggga tccattagta aacgagtttc ccgaaaccgt tcacggtttt 180 agatgtatgt tagcagttaa atatctgcag ttagtagaga agacttattc tcctgataca 240 ttagggcacg atttaattag ggatttaatt tcagtaatta gggctagaaa ttatgtcgaa 300 gcgaccagca gatattatca tttccacgcc cgcttcgaag gtacgccgcc gtctcaactt 360 cgacagccca tatgtgagcc gtgctgctgc ccccattgtc cgcgtcacca aagcaagagc 420 atgggcgaac aggcccatga acagaaagcc caggatgtac aggatgtaca gaagtcctga 480 tgtccctaga ggatgtgaag gcccatgtaa ggtccagtcg tttgagtcca gacatgacat 540 tcagcatata ggtaaagtca tgtgtgtcag tgatgttacg cgtggaactg ggctgactca 600 ccgagtgggt aaaaggtttt gtgttaaatc cgtttatgtc ttgggtaaga tatggatgga 660 cgagaatatt aagaccaaaa atcacacgaa cagtgtgatg ttttttttag ttagggatcg 720 tagacctgtg gataaacctc aagattttgg tgaggttttt aacatgtttg ataatgagcc 780 cagtacggct actgtgaaga atgttcatcg tgataggtat caagtgctta ggaaatggca 840 tgcaactgtt acgggtggac aatatgcgtc aaaggaacaa gctcttgtga agaagtttgt 900 tagggttaat aattatgttg tgtataacca gcaagaagct ggcaagtatg aaaatcattc 960 tgagaatgcg ttaatgttgt atatggcatg tacgcatgcc tctaacccag tgtatgctac 1020 tttgaagata cggatctatt tctatgattc ggtcacaaat taataaatat tgaattttat 1080 tgaataagat tggtctacat atacaatgtg ttctaataca tcccataata catgatcaac 1140 tgcacgaatt acattattaa tactgataat tcctaaatta tttaaatatt taagcacttg 1200 ggtcttaaag acccttaaga attgcccagt cggaggctgt gaagtcatcc agattcggta 1260 ggctagaaaa cacttgtgta tctccaacgc tttcctcagg ttgtaattga actgtatttg 1320 gacggtgatg ctgtcctctt tcatgagaaa tggccggttc tggtgttctg ttatcttgaa 1380 atacagggga ttttgattct cccaggtata cacgccattc tctgcttgag ctgcagtgat 1440 gagttcccct gtgcgtgaat ccatggttgt ggcaggctaa tgctatgaag tatgaacacc 1500 cacaagggag atcaacacgt cgacgcctcg tccccttctt ggctagcctg tgctgcactt 1560 tgattggaac ctgagtagag tgggccttcg agggtgacga agatcgcatt ctttaaagcc 1620 caatttctga gtgcattatt cttctcttca tccaagaact ctttataact tgaattaggt 1680 cctggattgc agaggaagat agtgggaatt ccgcctttaa tttgaactgg ctttccgtat 1740 ttggtatttg attgccagtc cctttgggcc cccatgaatt ctttaaagtg ctttaggtag 1800 tggggatcta cgtcatcgat gacgttatac cacgcatcat tgctgtaaac tttggggctt 1860 agatctaaat gaccgcatag gtaattatga ggccctaatg acctagccca catcgtttta 1920 cccgtacgac tgtctccctc aattactata ctttgaggcc tcagaggccg cgcagcggca 1980 accatgacat tttctgagac ccattcttca agttcttcag gaacttgatc aaaagaagaa 2040 gataaaaaag gcgaaatata aacctccaac ggaggactaa aaatcctatc taaattagaa 2100 tttaaattat gatattgaaa aataaatttt tctgggagtt tctcccttat tatagccatt 2160 gcagcttctt tagagcctgc atttagggct tctgcagcag catcattagc tgtctgttga 2220 cctcctcgtg cagatcttcc atcgatctgg aattctcccc attcgagggt gtctccgtcc 2280 ttgtcgatgt aggacttgac gtcggtgctg gatttagctc tctgaatgtt cggatggaaa 2340 tgtgctgacc tgtttgggga taccaggtcg aagaatcgtt gattcttgca ctgatatttc 2400 ccttcgaact ggatgagcac atggagatga gggctcccat ctttgtgtag ttctctgaag 2460 atcttgatgt attttttgtt tgttgggggt tggagattta ataataggaa aagtgcctct 2520 tctttagtaa gggagcactt gggataagtg agaaaataat ttttggcatt tatttttaac 2580 cgattcgggg ctgccatgtt gacttagtca atcggtgtct ctcaaccttc tctatgtatc 2640 ggtgtatcgg agtcctatat atatggagac tccaatggca taattgtaat aacaaaactt 2700 taatttgaaa tccttaaggc tccaaagcgg ccatccgtct aatatt 2746 //