ID   FJ159385; SV 1; linear; genomic RNA; STD; VRL; 1547 BP.
XX
AC   FJ159385;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Spiranthes mosaic virus 3 isolate BW1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Spiranthes mosaic virus 3
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1547
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; 7a905ef01fc3a331f5723cf07fdf09d6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1547
FT                   /organism="Spiranthes mosaic virus 3"
FT                   /host="Phlox stolonifera cultivar Bruces White"
FT                   /isolate="BW1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Maryland"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:290031"
FT   CDS             <1..1425
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRZ2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRZ2"
FT                   /protein_id="ACI06098.1"
FT                   /translation="STVVDNTLMVILAMYYTLMSCEVPISECVFFVNGDDLLIAINPFY
FT                   ADRLSQFSGYFRQLGLKYDFSNTTSDKTQLWFMSHRALHHDGMLIPKLEPERIVSILEW
FT                   DRSSEPTHRLEAICAAMIESWGYTELTHEIRKFYAWVLEQAPYKQLAQAGCAPYLAETA
FT                   LRHLYTGHRASEEELLRYVTCFGSEFAEREDESITLQSGTPGESQINAGDQKDKKDKKI
FT                   SDSATPQEKQAIESRKDRDVNVGTSGTFSVPRVQMTAKKMNLPKSKQKKIVNLDFLLAY
FT                   KPEQSDISNKRASHAQFTAWVTAVQEAYDVSDEQLQILMDGLMVWCIENGTSHKLTGNW
FT                   TMMDGADQVEYPLEPVIANAKPTLRQIMAHFSDLAEAYIKMRNSDRSYMPRYGLQRNLT
FT                   DMSLSQYAFDFYEVTSRTPIRAREALAQMKAAAVGNTTNRMFGLDGNLTNTEEDTERHT
FT                   AQDVNRHMHTLLGVRQ"
FT   mat_peptide     <1..600
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     601..1422
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1426..1547
XX
SQ   Sequence 1547 BP; 459 A; 332 C; 367 G; 389 T; 0 other;
     tccactgttg tcgacaacac actgatggtg attctcgcca tgtattacac ccttatgtca        60
     tgtgaagtcc caatctctga gtgtgtattc tttgtgaatg gggatgattt gctgatagca       120
     atcaatccat tctatgctga tcggctatct cagttttctg ggtactttcg ccaacttggt       180
     ctgaaatatg acttcagcaa cacgacaagt gacaagaccc aactgtggtt tatgtcacat       240
     cgagcgttgc atcacgatgg gatgctcatt ccaaagctcg aaccggagag aattgtgtct       300
     atactcgagt gggataggtc gagcgagccg acgcatcgtc tcgaagccat atgtgctgcc       360
     atgattgaat catggggcta tacggagtta actcatgaaa ttcgcaagtt ctatgcgtgg       420
     gttctagaac aggccccgta taagcaactt gcccaagctg gttgtgctcc atatttagcc       480
     gagacagcct taaggcacct atacacagga cacagggcta gtgaggaaga actactcagg       540
     tatgtcacat gctttggttc agaatttgct gagcgtgagg atgagtcgat aacgctccaa       600
     agtggaacgc caggcgaatc acaaattaac gctggggatc aaaaagataa gaaagacaaa       660
     aagatcagtg actcagccac accccaggag aagcaagcca ttgagtcgag aaaagacagg       720
     gatgtcaatg ttggcactag cggtacgttt agtgttccga gggtgcaaat gacagcaaag       780
     aaaatgaact tgccaaagtc gaaacagaaa aagatagtca atcttgactt tttgctggct       840
     tacaaacctg aacaaagtga tatctctaac aagagagcta gtcatgcaca attcaccgca       900
     tgggtcacag cagttcaaga agcatatgac gtgtcagacg agcagttgca aatactcatg       960
     gatggcttga tggtttggtg tattgaaaac ggaacttcac acaaactcac aggcaattgg      1020
     actatgatgg atggtgcgga ccaagtcgaa tatccgctag agcctgtcat tgctaatgcc      1080
     aaaccaacat tgcggcaaat aatggcacat tttagcgatc tagcggaagc ttatatcaag      1140
     atgagaaata gcgatcgcag ttatatgcct cgctatggcc ttcaaagaaa cctgactgat      1200
     atgagcttaa gtcagtacgc gtttgatttt tacgaggtta catcacgtac gccaatacgt      1260
     gctcgtgaag cgctagcgca aatgaaagca gcagctgttg gaaacacaac aaacagaatg      1320
     tttggccttg atggcaatct gaccaacact gaagaggata cggaacgaca tacggcacaa      1380
     gatgtcaatc gccacatgca caccttacta ggtgtgcgtc agtgattaac acgtctatcc      1440
     ttgctttcgc agaagcataa ttaatgttat attcatgttt ctgtctctct acctacactt      1500
     ggtgccatag tgatgttcac atcgaggttt tcaatggttt gtagagc                    1547
//