ID   FJ159384; SV 1; linear; genomic RNA; STD; VRL; 1567 BP.
XX
AC   FJ159384;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Spiranthes mosaic virus 3 isolate BR2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Spiranthes mosaic virus 3
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1567
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; b37ea9354999f4e2c2ea983a381d124b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1567
FT                   /organism="Spiranthes mosaic virus 3"
FT                   /host="Phlox stolonifera cultivar Blue Ridge"
FT                   /isolate="BR2"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Maryland"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:290031"
FT   CDS             <1..1434
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRZ1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRZ1"
FT                   /protein_id="ACI06097.1"
FT                   /translation="STVVDNTLMVILAMYYTLISCNIPITECVFFVNGDDLLIAIEPTH
FT                   AGKLSSFSSYFRQLGLKYEFTNTTTDKTQLWFMSHQAKLYDGMLIPKLEPERIVSILEW
FT                   DRSSEPTHRLEAICASMIESWGYPELTHEIRKFYAWVLEQAPYKQLAQNGCAPYLAETA
FT                   LRHLYTGHKASEEELMQYITCFRSDHEEFSDETITLQSENNGDPQINAGDVSGKKVDKK
FT                   PTEMQLTPQERQALGNSKKDRDVNVGTSGTFSVPRIQMTSKKMNLPKSKQKKIVNLNFL
FT                   LSYTPDQSDISNKRASHSQFTAWVDAVQEAYGVTDDQFQIIMDGLMVWCIENGTSQSLT
FT                   GSWTMMDGAEQVEYPLEPVISNAKPTFRQVMTHFSDLAEAYIKMRNSDRNYMPRYGLQR
FT                   NLTDMSLSQYAFDFYEVTSRTPIRAREALAQMKAAAVGTATNRMFGLDGNLTNTEEDTE
FT                   RHTAQDVNRNMHTLLGVRQ"
FT   mat_peptide     <1..600
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     601..1431
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1435..1567
XX
SQ   Sequence 1567 BP; 478 A; 332 C; 355 G; 402 T; 0 other;
     tcaactgtag ttgacaacac attgatggtc attctggcta tgtactacac actcatttca        60
     tgcaatattc caatcacaga atgtgttttc ttcgtgaatg gagatgatct gctgatagcc       120
     attgaaccca cacatgctgg gaagttgtct tccttctcaa gttactttcg gcaactcggt       180
     ctgaagtatg agtttacaaa taccacaacg gacaagacac aactctggtt catgtcacac       240
     caagccaagc tgtatgacgg aatgttaatt ccaaagcttg agcctgagcg aattgtgtcc       300
     atcctggaat gggatcgatc tagtgaacct acacacagat tggaagccat ttgtgcatca       360
     atgattgagt cgtggggtta tccagagttg acacatgaga tacggaaatt ctatgcgtgg       420
     gttttagaac aagcaccgta taaacagctg gcacaaaacg gttgtgctcc ctaccttgcc       480
     gaaactgcgc ttcgtcatct gtataccggg cacaaagcta gtgaagagga gcttatgcaa       540
     tacatcacat gctttcgttc agaccatgaa gagttcagcg atgaaacgat cacgttacag       600
     agcgaaaaca atggagatcc acaaataaac gctggagatg tgtcagggaa gaaagtggac       660
     aagaagccaa ctgaaatgca actaactcct caagaaaggc aggcacttgg caattctaag       720
     aaggatcgag acgttaatgt cggtaccagt ggaacattta gtgttccacg aatccaaatg       780
     acttcgaaga agatgaattt gccaaaatcc aaacagaaga agatcgtgaa tttgaatttt       840
     ctactctctt atacgcctga ccaaagtgac atttcaaaca agagagctag tcactcacaa       900
     tttacagcat gggttgatgc cgtgcaggag gcatatggag tgaccgacga tcagtttcag       960
     atcattatgg atggactgat ggtttggtgc atcgaaaatg ggacttcaca aagtttgaca      1020
     ggtagctgga caatgatgga tggtgctgag caggtggaat accctctcga accagttatc      1080
     tcaaatgcta agcccacctt caggcaagtg atgacacact tcagtgacct tgccgaagct      1140
     tatatcaaga tgagaaatag cgatcgtaat tacatgcctc gctatggcct tcaaagaaac      1200
     ctgacagata tgagcttaag tcagtatgcg tttgattttt acgaggttac atcacgtacg      1260
     ccaatacgtg ctcgtgaagc gctagcgcaa atgaaagcag cagctgttgg aactgcaaca      1320
     aacaggatgt ttggcctaga cggcaactta accaacactg aagaggatac ggaacgacat      1380
     acggcacaag atgtcaatcg caacatgcat accctcttgg gtgtgcgaca gtgattacca      1440
     cgtctatcct tgctttcaca gaagcatagt taatattatg tattaatttt catgtttctg      1500
     tctctctacc tacacttgat gttgcagtga tgttcacatc gatacattca atggtttgta      1560
     gagcgag                                                                1567
//