ID   FJ159382; SV 1; linear; genomic RNA; STD; VRL; 1567 BP.
XX
AC   FJ159382;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Spiranthes mosaic virus 3 isolate AK2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Spiranthes mosaic virus 3
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1567
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; 334b040d9b7028a2839cfaf430cb223d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1567
FT                   /organism="Spiranthes mosaic virus 3"
FT                   /host="Phlox glaberrima cultivar Anita Kistler"
FT                   /isolate="AK2"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Maryland"
FT                   /collection_date="2005"
FT                   /db_xref="taxon:290031"
FT   CDS             <1..1434
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRY9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRY9"
FT                   /protein_id="ACI06095.1"
FT                   /translation="STVVDNTLMVILAMYYTLISCSIPITECVFFVNGDDLLIAIEPTH
FT                   AGKLSSFSSHFRQLGLKYEFTNTTTDKTQLWFMSHQAKLYDGMLIPKLEPERIVSILEW
FT                   DRSSEPTHRLEAICASMIESWGYPELTHEIRKFYAWVLEQAPYKQLAQNGCAPYLAETA
FT                   LRHLYTGHKASEEELMQYITCFRSDHEEFSDETITLQSENNGSPQINAGDVSGKKADKK
FT                   PTEMQLTPQERQALGNSKKDRDVNVGTSGTFSVPRIQMTSKKMNLPKSKRKRIVNLDFL
FT                   LSYTPDQSDISNKRASHSQFTAWVDAVQEAYGVTDDQFQIIMDGLMVWCIENGTSQSLT
FT                   GSWTMMDGAEQVEYPLEPVISNAKPTFRQVMTHFSDLAEAYIKMRNSDRNYMPRYGLQR
FT                   NLTDMSLSQYAFDFYEVTSRTPIRAREALAQMKAAAVGTVTNRMFGLDGNLTNTEEDTE
FT                   RHTAQDVNRNMHTLLGVRQ"
FT   mat_peptide     <1..600
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     601..1431
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1435..1567
XX
SQ   Sequence 1567 BP; 472 A; 335 C; 362 G; 398 T; 0 other;
     tcaactgtag ttgacaacac attgatggtt attctggcta tgtactacac acttatttca        60
     tgtagtattc cgatcacaga atgtgttttc tttgtgaatg gagatgatct gttgatagcc       120
     attgaaccca cacatgctgg gaagttgtct tccttctcaa gtcactttcg gcaactcggt       180
     ctgaagtacg agtttacaaa taccacaacg gacaaaacac agctctggtt catgtcacac       240
     caagccaagt tgtacgatgg catgttaatt ccaaagcttg agcctgagcg aattgtgtcc       300
     atcctggaat gggatcggtc cagtgagcct acacacagat tagaagccat ttgtgcatca       360
     atgattgagt cgtggggcta tccagagttg acacatgaga tacggaaatt ctatgcgtgg       420
     gttttggaac aagcaccgta taaacagctg gcacaaaacg gttgtgctcc ctaccttgcc       480
     gagactgcac ttcgtcatct gtataccggg cacaaagcta gtgaagagga gcttatgcaa       540
     tacatcacat gctttcgttc agaccatgaa gagttcagcg atgaaacgat cacgttgcag       600
     agcgaaaaca atggaagtcc acaaataaac gctggagatg tgtcagggaa gaaagcggac       660
     aagaagccaa ctgaaatgca actaactcct caggaaaggc aggcacttgg caattccaag       720
     aaggaccgag acgttaatgt cggtactagt ggaacattta gtgttccacg aatccaaatg       780
     acttcgaaga aaatgaattt gccaaaatcc aaacggaaga ggatcgtgaa tttggacttt       840
     ttactctcgt atacgcctga ccaaagtgac atatcaaaca agagagctag tcactcacaa       900
     ttcacagcat gggttgatgc cgtgcaggag gcatatggag tgaccgacga tcagtttcag       960
     atcattatgg atggattgat ggtctggtgc atcgaaaatg ggacttcaca aagtttgaca      1020
     ggtagctgga caatgatgga tggcgctgag caggtagaat accctctcga accagttatc      1080
     tcaaatgcta agcccacttt caggcaagtg atgacacact tcagtgacct tgccgaagct      1140
     tatatcaaga tgagaaatag cgatcgcaat tacatgcctc gctatggcct tcaaagaaac      1200
     ctgacagata tgagcttaag tcagtatgcg tttgattttt acgaggttac atcacgtacg      1260
     ccaatacgtg ctcgtgaagc gctagcgcaa atgaaagcag cagctgttgg aactgtaaca      1320
     aacagaatgt ttggcctaga cggcaaccta accaacactg aagaggatac ggaacgacat      1380
     acggcacaag atgtcaatcg caacatgcat accctcttgg gtgtgcgaca gtgattacca      1440
     cgtctatcct tgctttcaca gaagcatagt taatattatg tattaatttt catgtttctg      1500
     tctctctacc tacacttgat gttgcagtga tgttcacatc gatacattca atggtttgta      1560
     gagcgag                                                                1567
//