ID   FJ159380; SV 1; linear; genomic RNA; STD; VRL; 1529 BP.
XX
AC   FJ159380;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Ornithogalum necrotic mosaic virus isolate B48B polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Ornithogalum virus 3
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1529
RA   Hammond J., Reinsel M.D., Vaira A.M.;
RT   "Potyvirus Diversity in Lachenalia and Ornithogalum";
RL   Unpublished.
XX
RN   [2]
RP   1-1529
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; 153dd3df2b82c658ab8dd7c4a4277278.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1529
FT                   /organism="Ornithogalum virus 3"
FT                   /host="Lachenalia"
FT                   /isolate="B48B"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /collection_date="2004"
FT                   /db_xref="taxon:186643"
FT   CDS             <1..1419
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRY5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRY5"
FT                   /protein_id="ACI06091.1"
FT                   /translation="STVVDNSLMVIITMQYALERQGIHLDEQNGIIRYFVNGDDLIIAV
FT                   EPTHTDILARLQTTFAELGLDFDFSHQTENRTELSYMSHQGLLRDGVYIPKICRERIVS
FT                   ILEWDRSDSPQQRLDAICAAQIEAWGYDDLLQEIREFYAWLIGMEPFRQVAAEGGAPYV
FT                   AETALRYLYLELDADAGELERYIQSYERKLSDSVVEDEVMFQSGTEDAGSEDEKRKRAE
FT                   EKAKREAEQAQGSRRGEDVNASTKGTYIIPRLRRMTKMRTPKFGGKELLNLDHLLSYKP
FT                   DELELSNTRATQAQFNRWCAKVMDAYQVKEDEFRIIANGLMVWCIENGTSPNINGNWIM
FT                   MDGQEQVEYPLKPIVEFAKPTLRQIMARFSDAAEAYIEMRNAEEPYMPRYGLIRNLTDM
FT                   SLARYAFDFYEVHARTPVRAREAHMQMEAAALRGSTSRLFGLDGNVGDATEDTERHTAD
FT                   DVNRNMHSLMGLKL"
FT   mat_peptide     <1..615
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     616..1416
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1420..1529
XX
SQ   Sequence 1529 BP; 433 A; 329 C; 436 G; 331 T; 0 other;
     tccacagtgg tggataattc actgatggtg ataatcacaa tgcagtacgc ccttgagagg        60
     caaggcattc atctggatga gcagaacgga attatccgat actttgtgaa tggcgacgat       120
     ttgataatag ccgtggagcc cacgcatact gacatcctgg cacgcctaca aacgacattc       180
     gcagaactgg ggctcgattt cgatttttca caccaaacgg aaaaccgcac tgaattatcg       240
     tacatgtcgc accaagggtt gttgcgtgat ggtgtataca tacccaagat ttgcagggag       300
     cgcatcgttt caattcttga atgggatcgg agcgactcac cgcagcagag gttagatgca       360
     atttgtgctg cacaaatcga ggcatggggc tacgatgact tgctacaaga gatccgcgaa       420
     ttttacgctt ggttgatcgg gatggagccg tttaggcaag tcgctgcaga aggtggagca       480
     ccgtatgttg cagaaacggc gctacgatac ctctatttag agctggatgc tgacgctggg       540
     gagttagaga ggtatataca aagctacgaa cggaagttga gcgacagtgt ggttgaagat       600
     gaggtgatgt ttcagtcggg cacagaggac gcaggcagcg aagatgagaa acggaaacga       660
     gccgaagaga aggctaaacg agaggcggag caagcccagg gctcgagacg aggagaagac       720
     gttaacgcct ccacgaaagg aacgtacatc ataccgaggc tacggcgcat gactaaaatg       780
     cggacgccga agtttggagg caaggaattg ttgaacttgg atcatttact gtcctataaa       840
     ccagatgaac tagaactttc caacacccga gcgacacaag cccagttcaa ccgatggtgt       900
     gccaaagtga tggatgccta tcaagtgaaa gaggatgaat ttaggatcat cgctaacgga       960
     ttaatggtgt ggtgcattga gaatggcaca tcaccgaaca tcaatgggaa ttggatcatg      1020
     atggacggcc aagagcaagt ggagtatcca ctcaaaccga ttgtggagtt tgctaagccg      1080
     acacttaggc agataatggc gcgctttagt gatgcagccg aggcatacat agaaatgcgc      1140
     aacgctgaag aaccatatat gccacgctat gggttaattc ggaacttgac cgatatgagc      1200
     ttggctcgct acgccttcga cttttacgaa gtgcacgctc gcacaccggt gagagcgcgc      1260
     gaagcgcaca tgcagatgga agcagcagca cttcgaggca gcacatcgcg cttgtttggc      1320
     ttggatggta acgtgggcga tgccaccgag gatacggagc gacacaccgc ggatgacgtg      1380
     aaccgcaaca tgcacagctt gatgggttta aagctgtagg acgttgagta ttgcttctta      1440
     attagttaac gctgtgaacg tccaaggatt tcggagttct agaaccaatc cagtgtggtg      1500
     taccaccttt gtgtctagaa caatgagac                                        1529
//