ID   FJ159378; SV 1; linear; genomic RNA; STD; VRL; 1575 BP.
XX
AC   FJ159378;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Ornithogalum stripe mosaic virus isolate OSS-6 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Ornithogalum virus 2
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1575
RA   Hammond J., Reinsel M.D., Vaira A.M.;
RT   "Potyvirus Diversity in Lachenalia and Ornithogalum";
RL   Unpublished.
XX
RN   [2]
RP   1-1575
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; 38768cb737dcd5a2a80f785c68275f3d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1575
FT                   /organism="Ornithogalum virus 2"
FT                   /host="Ornithogalum"
FT                   /isolate="OSS-6"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Maryland"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:186642"
FT   CDS             <1..1392
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRY3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRY3"
FT                   /protein_id="ACI06089.1"
FT                   /translation="STVVDNTLMVLLAMFYALHKSGISYQTYKQYCQFFINGDDLLIAV
FT                   NGTLGESALDTFERSFSELGLNYKFDNRTREKTELWFMSHRGLVIDEMYIPKLEPERVV
FT                   SILEWDRSVEPEHRLEAICAAMIESWGYPELTHQIRLFYRWVLTQAPYAALASVGKAPY
FT                   ISELALRNLYTGTQVKDSELEVYIEAMKEESLQEEDYNVYHQTSASSDLDAGRDTPMIT
FT                   TKKKDKDLDTGTSGTFSVPRLRQLPSKMSLPKVRGKTIVNLPHLITYTPDQIHLSNTRS
FT                   TMKQFEFWYEGVKKEYEVDDTQMEIIMNGLMVWCIENGTSPNLNGMWVMMEGDEQIEFP
FT                   LKPVIEFAQPTFRQIMAHFSNVAEAYIEKRNSEQKYMPRYGLQRNLTDYSLARYAFDFY
FT                   EMTSKTPVRAREAHMQMKAAAIRGTTNRLFGLDGNVSQKEEDTERHTTEDVNRKMHSLL
FT                   GVSTM"
FT   mat_peptide     <1..615
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     616..1389
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1393..1575
XX
SQ   Sequence 1575 BP; 470 A; 323 C; 378 G; 404 T; 0 other;
     tcaactgtcg tagacaacac cttgatggtg ctacttgcaa tgttttacgc gctgcacaag        60
     agcgggattt cttaccaaac gtacaagcaa tactgccaat ttttcataaa tggggacgac       120
     cttctcattg ctgtaaatgg cacacttggt gagagtgctc ttgatacgtt cgagcgatct       180
     tttagtgagt tgggtctcaa ttacaaattc gacaacagaa cacgtgagaa gactgaactc       240
     tggttcatgt ctcacagagg cttggtaatt gatgaaatgt atataccaaa actggaacca       300
     gagagagttg tgtccatcct tgaatgggac aggagcgttg aacctgaaca tcgactcgaa       360
     gcaatttgcg ctgcaatgat agagtcatgg ggatatcctg aactaacgca ccagatacga       420
     ctattttaca ggtgggtttt aacacaggca ccatacgcag ccctcgcatc tgttggaaaa       480
     gcaccataca tctccgagtt agctctcagg aacttgtaca caggcacaca agtcaaagac       540
     tcggagttgg aagtgtacat agaagcgatg aaagaggaat cactacagga ggaggactac       600
     aacgtatatc atcaaacctc ggcctcgagt gatttggatg ctggacgtga tacaccaatg       660
     atcacaacca agaagaagga taaagatctt gatacaggca caagtggaac gttctcggtg       720
     ccacgattac gccaactgcc aagcaagatg tcactcccga aagtccgagg caagaccatt       780
     gtgaatttac ctcatttaat cacttacact cctgatcaaa ttcatctctc gaatacgcgc       840
     tcaacaatga aacagtttga attctggtat gagggagtga aaaaggagta cgaggttgac       900
     gatacccaga tggagataat aatgaatgga ttgatggtgt ggtgtatcga aaatggtaca       960
     tcaccaaacc tcaatggcat gtgggtcatg atggagggcg atgaacaaat agaatttcct      1020
     ctcaagccag ttatcgaatt tgcccaaccg acattccggc agataatggc acatttcagt      1080
     aacgttgctg aagcgtatat tgaaaagagg aattctgagc agaaatacat gcctaggtac      1140
     gggcttcagc gaaatttaac tgactacagt ctcgcgcgtt atgcgttcga tttttacgag      1200
     atgacttcca agacgcctgt gcgcgctcga gaggcacaca tgcaaatgaa agcagccgct      1260
     attagaggta ccactaatcg gttgtttggc ttggatggga acgttagtca gaaggaagag      1320
     gacacggagc gtcacactac tgaagatgtc aacaggaaaa tgcactcact gctgggtgtg      1380
     tcaacaatgt agtgtgatgg taggtgcgaa cttacccgtc agcatccttt tttattgcaa      1440
     taatataagt gtgtagctat gcgctagtgt ggttttacca ccgttcacta tattatatgt      1500
     tttaacactt gtatttcttg gttgtgtggt gagattttat ctcgtatcaa ccgtgtctta      1560
     caggtgtgag aagac                                                       1575
//