ID   FJ159377; SV 1; linear; genomic RNA; STD; VRL; 1574 BP.
XX
AC   FJ159377;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Ornithogalum stripe mosaic virus isolate OSS-4 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Ornithogalum virus 2
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1574
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; e01f16ad80facbd21365ca9b5ec0a2a8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1574
FT                   /organism="Ornithogalum virus 2"
FT                   /host="Ornithogalum"
FT                   /isolate="OSS-4"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Maryland"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:186642"
FT   CDS             <1..1392
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRY2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRY2"
FT                   /protein_id="ACI06088.1"
FT                   /translation="STVVDNTLMVLLAMFYALHKSGISYQTYKQHCQFFINGDDLLIAV
FT                   NGKLGESALDTFEQSFSELGLNYKFDSRTREKTELWFMSHRGLLIDGIYVPKLEPERVV
FT                   SILEWDRSVEPEHRLEAICAAMIESWGYPELTHQIRLFYRWVLTQAPYAALASVGKAPY
FT                   ISELALKNLYTGTQVKDSELEVYILAMEEELLKEEDYNVYHQTSTSSDLDAGRDTPVVT
FT                   TKKKDKDLDTGTSGTFSVPRLRQLPSKMSLPKVRGKTIVNLPHLITYTPDQIHLSNTRA
FT                   TMKQFEFWYEGVKKEYEVDDSQMEIIMNGLMVWCIENGTSPNLNGMWVMMEGEEQIEFP
FT                   LKPVIEFAQPTFRQIMAHFSNVAEAYIEKRNSEQKYMPRYGLQRNLTDYSLARYAFDFY
FT                   EMTSKTPVRAREAHMQMKAAAIRGTTNRLFGLDGNVSQKEEDTERHTTEDVNRKMHSLL
FT                   GVSTM"
FT   mat_peptide     <1..615
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     616..1389
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1393..1574
XX
SQ   Sequence 1574 BP; 478 A; 302 C; 371 G; 423 T; 0 other;
     tcaaccgttg tagataacac tttgatggtg ttacttgcaa tgttttatgc gttgcacaag        60
     agtggaattt cataccaaac atacaagcag cattgtcagt ttttcataaa tggggatgac       120
     cttttaattg ctgtgaatgg taaacttggt gagagtgctc tcgacacgtt cgaacaatcc       180
     tttagtgaat taggtttgaa ttataagttc gacagcagga cacgtgagaa aactgaactt       240
     tggttcatgt cccacagagg cttactcatt gatggaatat atgtaccgaa gttagagcca       300
     gagagagttg tgtctattct tgaatgggac agaagcgtcg agcctgaaca tcggcttgaa       360
     gcaatttgcg ctgcaatgat agagtcgtgg ggttatcccg aattaacaca ccaaatacga       420
     ctattttaca ggtgggtttt gacacaagca ccgtacgcag ctctcgcgtc tgttggaaaa       480
     gcaccatata tctccgaatt ggctctcaaa aacctgtaca caggcacaca ggtcaaggac       540
     tcagagttgg aggtatacat actagcgatg gaggaagagc tactaaagga agaggactac       600
     aatgtgtacc atcaaacttc aacttcaagt gacttggatg ctggtcgtga tacaccagtt       660
     gttacaacta agaagaagga caaagatctt gacacaggga caagtggaac tttttcggtg       720
     ccacgattac gtcaattacc aagcaaaatg tcacttccga aagtccgagg gaagaccata       780
     gtgaatttgc ctcacttaat cacgtacact cccgatcaaa tccacctctc aaacacgcgc       840
     gcaacaatga agcaatttga attttggtat gagggagtga agaaggaata tgaagtcgac       900
     gattctcaga tggagataat tatgaatgga ttaatggtgt ggtgcattga aaatggcaca       960
     tcaccaaatc tcaatggcat gtgggtcatg atggaaggtg aggaacaaat agaattccct      1020
     cttaagccag ttatcgaatt tgctcaaccg acattccggc agataatggc acatttcagt      1080
     aacgttgctg aagcgtatat tgaaaagagg aattctgaac agaaatacat gcccaggtac      1140
     gggcttcagc gaaatttaac tgactacagt ctcgcacgtt atgcgtttga tttttacgag      1200
     atgacatcca agacgcctgt tcgtgctcga gaagcacaca tgcaaatgaa agcagctgcc      1260
     attagaggta ccactaatcg gctgtttggc ttggatggga acgttagtca gaaagaagag      1320
     gacacggagc gtcacactac tgaagatgtc aacaggaaaa tgcactcact gctgggtgtg      1380
     tcaacaatgt agtgtgatgg taggtgcgaa cttacccgtc agcatccttt ttattgcaat      1440
     aatataagtg tgtagctatg cttcagtgtg gttttaccac cgttcactat attatatgtt      1500
     ttagcatttg tatctcttag ttgtgtggtg agattttatc tcgtatcaac tgtgacttac      1560
     agatgtgaga agac                                                        1574
//