ID   FJ159374; SV 1; linear; genomic RNA; STD; VRL; 1649 BP.
XX
AC   FJ159374;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Ornithogalum mosaic virus isolate OSS-1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Ornithogalum mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1649
RA   Hammond J., Reinsel M.D., Vaira A.M.;
RT   "Potyvirus Diversity in Lachenalia and Ornithogalum";
RL   Unpublished.
XX
RN   [2]
RP   1-1649
RA   Hammond J., Reinsel M.D.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; c625370ce5b4a511ba5b58c355a16da4.
DR   EuropePMC; PMC5877448; 29607262.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1649
FT                   /organism="Ornithogalum mosaic virus"
FT                   /host="Ornithogalum"
FT                   /isolate="OSS-1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Maryland"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:12204"
FT   CDS             <1..1377
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRX9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRX9"
FT                   /protein_id="ACI06085.1"
FT                   /translation="STVVDNTLMVVLAMNYALAKLSISYDQINERIRYFANGDDLLIAV
FT                   EPEGGNQILDSLSASFSELGLNYDFNDRTRDKSQLSFMSHQALWVDGMYIPKIKEERVV
FT                   SILEWDRSTQPEHRIEAVCAAMIEAWGYPDLLQEIRKFYAYMVTQEPYSAIHAQGKTRY
FT                   ISEQALITLYKDRKVVLGDIEPYIQKLAEMSLEFEDEEVHHQADSMDAGGPSRQPVEVA
FT                   RQPDQDVNAGTFPIARVKAISDKMMLPKVRGKAVLNLQHLIQYSPEQTEISNTRATRTQ
FT                   FDHWYDKVKESYGVTDDQMSVILNGLMVWCIENGTSPNLSGNWTMMDGNEQIEYPLQPV
FT                   LENAQPTFRQIMAHFSNAAEAYIEKRNSEQRYMPRYGNQRNLNDYSLARYAFDFYEMTS
FT                   RTPNRAREAHIQMKAAALRNTKTKLFGLDGKVGTEEEDTERHTASDVRRDMHSLLGVSM
FT                   "
FT   mat_peptide     <1..615
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     616..1374
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1378..1649
XX
SQ   Sequence 1649 BP; 517 A; 314 C; 391 G; 427 T; 0 other;
     tcaacagttg ttgacaatac attgatggtt gttcttgcca tgaattacgc tttggcaaaa        60
     ctttcaatat catatgatca gataaacgaa cgcattcgtt actttgccaa cggcgatgat       120
     ttgttaattg cagttgaacc agaaggtggc aatcaaattt tggactctct ctcggcatct       180
     ttttctgaat taggacttaa ctacgatttt aacgatagga caagggacaa gtcacaactt       240
     agtttcatgt cacatcaggc attatgggtg gacggaatgt acataccgaa aattaaggag       300
     gaaagagtag tttctatttt ggagtgggat aggagcacgc aaccagagca tcgaatcgaa       360
     gctgtgtgtg ccgcaatgat tgaagcatgg ggctaccctg acttgctgca agagatcaga       420
     aaattctatg cgtatatggt cacccaagaa ccatacagcg caatacacgc tcaagggaaa       480
     acgcgctaca tttcggaaca agctttaatc acattgtaca aagaccgaaa agttgtgctt       540
     ggcgacattg aaccgtatat tcagaaactc gccgaaatga gcttggaatt tgaagatgaa       600
     gaagtccacc atcaagcaga ttcaatggat gcgggtggac ccagtcgaca accggttgag       660
     gttgctcgac aaccagacca ggatgtgaat gcaggcacat ttccgatagc aagagtaaag       720
     gctatcagtg acaaaatgat gctaccaaaa gtgcgaggta aggcagtact caatctgcaa       780
     caccttattc agtacagccc cgaacagaca gaaatatcca acacgcgggc aactcgcaca       840
     cagtttgatc actggtacga taaggtgaag gaaagttatg gcgtcactga cgatcaaatg       900
     tcagtgattc tgaatggctt gatggtttgg tgcatcgaaa atggcacatc accaaacctg       960
     agtggaaact ggacaatgat ggatggcaac gaacaaatag aatatccatt acaaccagtt      1020
     cttgagaatg cgcaaccaac atttcgacag attatggcgc atttttcaaa cgcagccgag      1080
     gcgtatattg agaaaagaaa ctcggaacaa aggtacatgc cgaggtatgg caatcaacga      1140
     aatctgaacg actacagttt agctcgctat gcatttgatt tttatgaaat gacatcccgc      1200
     acccctaaca gggcgcgaga ggcacatatt caaatgaaag cagcggctct tcgaaacacc      1260
     aaaacgaagt tgtttggttt ggatggaaaa gttggtaccg aggaagagga cacagaacgg      1320
     cacacggcaa gcgatgttcg tcgtgatatg cattcactgc taggtgttag catgtgattt      1380
     agtgaaggtg ggtttagtta catgaattta aatctactct gttagcatcc tttcctatga      1440
     attatgcgta gtacttattt gtcttagtga ccagtgtagc caagcgttac gctgggtgat      1500
     aagacaagtg gatattagtg tgtgatttcg aacttattat tgttgtattg taactgctgg      1560
     atgaggtgac tgttttagtc tagcacgaag attacgatag gtgactcatt tagcaaatat      1620
     ttataatatt tcaatagtgt gttagagac                                        1649
//