ID   FJ159372; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
XX
AC   FJ159372;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Ornithogalum mosaic virus isolate LachX polyprotein gene, partial cds.
XX
KW   .
XX
OS   Ornithogalum mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1647
RA   Hammond J., Reinsel M.D., Vaira A.M.;
RT   "Potyvirus Diversity in Lachenalia and Ornithogalum";
RL   Unpublished.
XX
RN   [2]
RP   1-1647
RA   Hammond J., Reinsel M.D., Vaira A.M.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; 0fb9d69f9300bf5f4fce5eee7623ee18.
DR   EuropePMC; PMC5877448; 29607262.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Ornithogalum mosaic virus"
FT                   /host="Lachenalia"
FT                   /isolate="LachX"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Maryland"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12204"
FT   CDS             <1..1377
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRX7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRX7"
FT                   /protein_id="ACI06083.1"
FT                   /translation="STVVDNTLMVILAMNYALAKLSITSEEAHDLIRYFANGDDLLIAV
FT                   EPKRGSSILDSLAQSFEDLGLNYDFTQRTFDKSQLSFMSHHAIWDGEMYIPKIKRERIV
FT                   SILEWDRSTQPEHRIEAVCAATIEAWGYPELLHEIRKFYAFLVTQEPYNALHAQGRTRY
FT                   ISEQALITLYRDRKVELKDIEPYLQKLADMSLDYSDDEVCHQAETVDAGGTSKQANPVV
FT                   AKPDKDVNVGTFTIPRVKPLNDKMMLPRVRGKTILNLQHLIQYSPEQVDISNTRATRTQ
FT                   FNNWYDKVKENYAVTDEQMSVILNGLMVWCIENGTSPNLNGNWTMMDRDEQVEYSLKPV
FT                   LENAQPTFRQIMAHFSNAAEAYIEKRNSEQRYMPRYGSQRNLNDYSLARYAFDFYEITA
FT                   RTPNRAREAHIQMKAAALRNTKTKLFGLDGNVGTEEEDTERHTATDVRRDMHSLLGVSM
FT                   "
FT   mat_peptide     <1..615
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     616..1374
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1378..1647
XX
SQ   Sequence 1647 BP; 521 A; 313 C; 371 G; 442 T; 0 other;
     tcaacagttg tggacaacac tctaatggta attctagcca tgaattatgc acttgcgaaa        60
     ttatctataa cgtctgagga agcacacgac ctcattcgtt attttgcaaa tggtgatgat       120
     ttactcattg cagtggaacc aaaacgtggt tcatccatct tagattctct cgcgcaatca       180
     ttcgaagact taggtcttaa ttatgatttc actcagcgca cgtttgataa atcccagttg       240
     agtttcatgt cacatcacgc tatatgggat ggagagatgt atattccgaa aattaagcgg       300
     gaaagaatcg tttcaattct agaatgggat cgaagtacac aaccggaaca tcgaattgaa       360
     gcagtctgtg cagcaacgat agaagcttgg ggctatccag aacttctcca tgaaatcaga       420
     aagttttatg ctttccttgt cactcaagaa ccatataatg cacttcacgc ccaaggcaga       480
     actcggtata tatccgaaca agcgctaata acattatatc gtgacaggaa agtggagctc       540
     aaggacattg aaccttactt gcagaagcta gcagacatga gtctcgatta ctcggatgat       600
     gaagtttgcc accaagctga aacggtcgat gcaggcggta cgagcaaaca agcaaatcct       660
     gttgtggcga aaccagataa agacgtcaac gttgggacgt ttacaattcc tcgagtgaaa       720
     ccgcttaatg acaagatgat gcttccaaga gtgcgaggga aaacaattct caatttgcaa       780
     caccttatcc agtacagccc tgaacaagtt gacatatcaa acacacgggc cactcgcaca       840
     caattcaaca actggtatga taaggtgaag gagaattatg cagtaacaga tgagcaaatg       900
     tcggttattt tgaatggtct aatggtttgg tgcattgaaa atggtacttc accaaatctg       960
     aatggaaatt ggactatgat ggacagagat gaacaggttg agtattcact caaaccagtt      1020
     cttgagaatg cgcaaccgac gtttcgacaa attatggcgc atttttctaa cgcagccgaa      1080
     gcgtatattg aaaaacgaaa ttcggagcaa aggtacatgc ctaggtacgg cagtcaacga      1140
     aatctgaacg actacagctt agcccgctat gcatttgatt tctatgaaat cacagcacga      1200
     accccgaata gggctcgtga agcacatata caaatgaagg cggcagctct tcgaaacacc      1260
     aaaacgaagt tgtttggttt ggatgggaat gtgggtaccg aagaagagga cacggaacgg      1320
     cacacggcga ctgatgttcg tcgtgatatg cattcactgc taggtgttag catgtgattt      1380
     agtgaaggtg gaagtaataa tataaataac aatatttcta ctccgttagc atccttttct      1440
     tttgaattat acgtagttat cattttattt ggtgatcaat gcagccatga gttgcattga      1500
     gtgacaaatg gagtgagtac tagtgtgtga tttcgagcat attagcacta tattgtgatc      1560
     tttaaggttg gtgacgaatg tagtttaaga ttgcattcgg tgacagactt agagaatatc      1620
     ataatatttt actagtgtgt aagagac                                          1647
//