ID   FJ159371; SV 1; linear; genomic RNA; STD; VRL; 1643 BP.
XX
AC   FJ159371;
XX
DT   28-SEP-2008 (Rel. 97, Created)
DT   28-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Ornithogalum mosaic virus isolate Lac33 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Ornithogalum mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1643
RA   Hammond J., Reinsel M.D., Vaira A.M.;
RT   "Potyvirus Diversity in Lachenalia and Ornithogalum";
RL   Unpublished.
XX
RN   [2]
RP   1-1643
RA   Hammond J., Reinsel M.D., Vaira A.M.;
RT   ;
RL   Submitted (25-AUG-2008) to the INSDC.
RL   Floral and Nursery Plants Research Unit, National Arboretum, US Department
RL   of Agriculture, 10300 Baltimore Avenue, Building 010A, Beltsville, MD
RL   20705, USA
XX
DR   MD5; 133d49a837fa77d07d9fcb74e7f36633.
DR   EuropePMC; PMC5877448; 29607262.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1643
FT                   /organism="Ornithogalum mosaic virus"
FT                   /host="Lachenalia"
FT                   /isolate="Lac33"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12204"
FT   CDS             <1..1377
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B6DRX6"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B6DRX6"
FT                   /protein_id="ACI06082.1"
FT                   /translation="STVVDNTLMVVLAMNYSLAKLNIPFEAMDSRIRYFANGDDLIIAV
FT                   NPVGGEQILDSLQDSFSELGLNYDFNDRTYNKEQLSFMSHQALWDGDMYIPKIKAERVV
FT                   SILEWDRSVLPEHRIEAVCAAMIEAWGFPNLLQEIRKFYAYMVTQEPYSALHAQGQTRY
FT                   ISEQALITLYKDRKVILNDIEPYLQKLAEISLESGEEEVWHQAESMDAGGSSRQQDSVA
FT                   RQQDKDVNVGTFSVARVKQISDKMMLPRVRGKAVLNLQHLIQYSPEQTEISNTRATRTQ
FT                   FDHWYDKVKESYGVTDDQMSVILNGLMVWCIENGTSPNLHGNWTMMDGEEQVEYPLQPI
FT                   LENAQPTFRQIMAHFSNAAEAYIEKRNSEQRYMPRYGNQRNLNDYSLARYAFDFYEMTS
FT                   RTPNRAREAHIQMKAAALRNTKTKLFGLDGKVGTEEEDTERHTASDVRRDMHSLLGVSM
FT                   "
FT   mat_peptide     <1..615
FT                   /product="nuclear inclusion b protein"
FT                   /note="NIb; replicase"
FT   mat_peptide     616..1374
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1378..1643
XX
SQ   Sequence 1643 BP; 496 A; 290 C; 410 G; 447 T; 0 other;
     tcgactgttg ttgataatac actgatggtc gttttagcaa tgaactattc tctcgcaaaa        60
     ttgaacatcc cattcgaagc gatggatagt aggatacgtt actttgccaa tggcgacgat       120
     ttaataattg cagtcaatcc ggttggagga gaacaaattt tggattcctt gcaagattca       180
     ttttcggagt tagggctgaa ctacgatttc aacgatcgta cgtacaataa ggaacaattg       240
     agtttcatgt cccatcaagc tttgtgggat ggagacatgt acatacccaa aataaaggca       300
     gagcgggtgg tgtcgattct ggagtgggat agaagtgtac ttcctgagca tcgaattgaa       360
     gcagtttgtg ccgctatgat tgaagcatgg ggctttccta atttgctgca agagattagg       420
     aagttttacg catatatggt gacacaggaa ccatatagtg cattgcatgc acaaggacaa       480
     acaagataca tttcagagca agccctgata acactttaca aggaccgaaa agtgatactc       540
     aatgatattg aaccttatct tcagaaattg gcggaaatat cattggaatc gggtgaggaa       600
     gaagtttggc atcaggcaga atccatggat gctggcggct ctagccgaca acaggatagc       660
     gttgcacgac aacaagacaa ggacgttaat gttggaacgt tttctgtggc acgagtgaag       720
     caaattagtg acaagatgat gctaccaaga gtgcgaggaa aggcagttct caatctgcag       780
     caccttattc agtacagccc tgagcaaacg gagatttcga acacaagggc tactcgcaca       840
     cagtttgatc actggtacga taaggtgaaa gaaagttatg gagtaactga cgatcaaatg       900
     tcagttatat tgaatggctt gatggtttgg tgtattgaaa atggcacatc accgaactta       960
     catggaaatt ggactatgat ggatggggag gaacaggttg agtatccatt gcagcccata      1020
     cttgagaatg cgcagccaac ttttcgacaa attatggcgc atttctccaa cgcagccgag      1080
     gcgtatattg agaaaagaaa ctcggaacag aggtacatgc cgaggtacgg caaccaacga      1140
     aatctgaacg actacagttt ggcccgctat gcatttgatt tttatgaaat gacatctcga      1200
     acgcccaaca gggctagaga ggcacatatt caaatgaaag cggcagctct tcgaaacacc      1260
     aaaacgaagt tgtttggttt ggatgggaaa gtgggtaccg aggaagagga cacggaacgg      1320
     cacacggcaa gcgatgttcg tcgtgacatg cattcactac tgggtgttag tatgtgattt      1380
     agtgaaggtg gattagttga tattatttaa tctactccgt tagcatcctt tcttttgaat      1440
     tatgcgtagt acttgtttaa atcagtgact gactcagtca agtattgcgt caggtgatgg      1500
     tttgagcaaa ttctagtgtg tgatttcgaa cttattattg ttgtattgtg attgttagac      1560
     agggtgactg ttttagtttg tcaaattaca acaggtgacc tgtttagcaa atatctataa      1620
     tatttcaata gtgtgctaga gac                                              1643
//