ID FJ159267; SV 1; circular; genomic DNA; STD; VRL; 2737 BP. XX AC FJ159267; XX DT 28-SEP-2008 (Rel. 97, Created) DT 11-APR-2009 (Rel. 100, Last updated, Version 3) XX DE Mesta yellow vein mosaic Bahraich virus-[India:Kaisargunj:2008] segment DNA DE A, complete sequence. XX KW . XX OS Mesta yellow vein mosaic Bahraich virus-[India:Kaisargunj:2008] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2737 RX DOI; 10.1016/j.virusres.2008.11.022. RX PUBMED; 19428737. RA Roy A., Acharyya S., Das S., Ghosh R., Paul S., Srivastavab R.M., RA Ghosh S.K.; RT "Distribution, epidemiology and molecular variability of the begomovirus RT complexes associated with yellow vein mosaic disease of mesta in India"; RL Virus Res. 141(2):237-246(2009). XX RN [2] RP 1-2737 RA Das S., Ghosh R., Acharyya S., Paul S., Palit P., Das A., Roy A., RA Ghosh S.K.; RT ; RL Submitted (25-AUG-2008) to the INSDC. RL Crop Protection, Central Research Institute for Jute and Allied Fibres, RL Barrackpore, Kolkata, West Bengal 700120, India XX DR MD5; a60606d03f220ee63402e28d5f07371f. XX FH Key Location/Qualifiers FH FT source 1..2737 FT /organism="Mesta yellow vein mosaic Bahraich FT virus-[India:Kaisargunj:2008]" FT /segment="DNA A" FT /host="Hibiscus cannabinus" FT /isolate="Kaisargunj:North India" FT /mol_type="genomic DNA" FT /country="India:North India, Kaisargunj" FT /clone="NI-FL-25" FT /db_xref="taxon:562951" FT gene 117..482 FT /gene="AV2" FT CDS 117..482 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:B6DRT5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B6DRT5" FT /protein_id="ACI06047.1" FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL FT ICILRSRNYVEASCRYRHFYARVESTSASELRQPIHQPCCCPHCPRHKATGMDKQTYEQ FT EAQNVSDVQKSGCSKGL" FT gene complement(181..585) FT /gene="AC5" FT CDS complement(181..585) FT /codon_start=1 FT /gene="AC5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:B6DRT6" FT /protein_id="ACI06053.1" FT /translation="MGQTDSTRNIRNTHHLTNMDNIMSGLKRLYLTGTLTTPWNIRTSV FT HPIHSGLPVHRSVCPCLLLCDADNGGSNTAGVWAAEVQTPTYFRRGRRNDDIGSSLRHN FT YESVKYRLNPVLTRNQVYPVNNPAIKVANI" FT gene 277..1047 FT /gene="AV1" FT CDS 277..1047 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:B6DRT7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B6DRT7" FT /protein_id="ACI06048.1" FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRVAAPIVRVTKQQAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR FT IGKLFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRLPVDKPQDFGEVFNMFDNEP FT STATVKNSHRDRYQVLRKWHATVTGGQYVSKEQALVKKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1050..1454) FT /gene="AC3" FT /gene_synonym="ren" FT CDS complement(1050..1454) FT /codon_start=1 FT /gene="AC3" FT /gene_synonym="ren" FT /product="replication enhancer protein" FT /db_xref="GOA:B6DRT8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B6DRT8" FT /protein_id="ACI06051.1" FT /translation="MDSRTGERITAAHSTDGVFIWEVPNPLYFKILSHDNRPFTTNMDI FT ITMRIHINYNLRKALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNL FT VIKAVEHVLYNVINQTMYVDQYSDIKFKLY" FT gene complement(1147..1599) FT /gene="AC2" FT /gene_synonym="trap" FT CDS complement(1147..1599) FT /codon_start=1 FT /gene="AC2" FT /gene_synonym="trap" FT /product="transcription activator protein" FT /db_xref="GOA:B6DRT9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B6DRT9" FT /protein_id="ACI06050.1" FT /translation="MQHSSFSPNRSTPVPIKVQHREAKRRNRRKRVDLECGCSYYLSIN FT CHNHGFSHRGTHHCSSFNGWRLYLGGSKSPIFQNPQPRQPSIHDEHGHHNNEDPYQLQP FT SKSSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSTQVSQQSRCNLT" FT gene complement(1496..2584) FT /gene="AC1" FT /gene_synonym="rep" FT CDS complement(1496..2584) FT /codon_start=1 FT /gene="AC1" FT /gene_synonym="rep" FT /product="replication initiator protein" FT /db_xref="GOA:B6DRU0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B6DRU0" FT /protein_id="ACI06049.1" FT /translation="MPPRRNGIYSKDYFVTYPKCSLTKEEALSQLLNLQTPTSKKYIRI FT CRELHEDGTPRVRVLIQFEGKFKCQNMRFFDLVSPSWSAHFRPNIQGAKSSSDVKSYIE FT KDGDILDWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEAIRVIKELAPKDFVLQFHN FT LNANLNRIFQEPPAPYVSPFSSSSFDQVPEELEEWASENVVDAAARPLRPQSIVIEGDS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEDKNSALKSWALKNATFVFLTQPLY FT SGTNQSSTQGSEEAQQEETSGP" FT gene complement(2092..2430) FT /gene="AC4" FT CDS complement(2092..2430) FT /codon_start=1 FT /gene="AC4" FT /product="regulatory protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B6DRU1" FT /protein_id="ACI06052.1" FT /translation="MGLLACEFSSSSKGNSSARICDSSTWSPQAGQHISDQTYRELNPA FT PTSSPTSRRTGTFSTGDNFRSTEGQQEEGNRQPMTLTPQHLTREVSRRLLESLRNWLLK FT ILYCNFII" XX SQ Sequence 2737 BP; 718 A; 550 C; 641 G; 828 T; 0 other; accggatggc cgcgcgattt ttttaagtgt gggtccagaa cgcaccacga tgcagactca 60 aagcttagat acgctccttc ggctataagt acttgcgact aagtttcaat tcaaaaatgt 120 gggatccact attaaacgaa tttccggata cggtgcacgg gtttcggtgt atgctttctg 180 tcaaatattt gcaactttta tcgcaggatt attcaccgga tacacttggt tacgagttaa 240 tacgggattt aatctgtatt ttacgctctc gtaattatgt cgaagcgagc tgccgatatc 300 gtcatttcta cgcccgcgtc gaaagtacgt cggcgtctga acttcggcag cccatacacc 360 agccgtgttg ctgcccccat tgtccgcgtc acaaagcaac aggcatggac aaacagacct 420 atgaacagga agcccagaat gtatcggatg tacagaagtc cggatgttcc aaggggttgt 480 gagggtccct gtaaggtaca atcgtttgag tccagacatg atgttgtcca tattggtaag 540 gtgatgtgta tttctgatgt tacgcgtgga gtcggtttga cccatcgtat tggtaaactt 600 ttttgtgtca agtcagttta tgttttaggt aagatatgga tggatgaaaa tataaagacc 660 aagaatcaca cgaattctgt gatgttcttt ttagtccgcg accgtcttcc tgttgacaaa 720 cctcaggatt ttggtgaggt attcaatatg tttgacaacg aacccagtac agcaactgtg 780 aagaatagtc atagggatcg ttaccaggtg ttgaggaaat ggcatgcaac cgtcacgggt 840 ggtcaatatg tgagtaagga acaggctttg gtcaagaagt ttgtcagagt taacaattat 900 gttgtttaca accagcagga ggcaggaaaa tacgagaatc acaccgagaa tgcattgatg 960 ctttatatgg cttgtaccca tgctagtaac ccagtttatg ctacgcttaa gattcggatt 1020 tatttttatg actctgtaac gaattgaaat taataaagtt tgaattttat atctgaatat 1080 tggtctacat acattgtttg attaattaca ttgtacaata catgttcaac ggctttaata 1140 actaaattaa gtgagattac accgagattg ttgagatact tgagtacttg ggttttgaat 1200 acccttaaga aaagaccagt cggagggtgt aaggtcgtcc agattcggaa ggttagaaaa 1260 cacttgtgca ctcccagagc ttttcgaagg ttgtagttga tatggatcct cattgttatg 1320 atgtccatgt tcgtcgtgaa tggacggttg tcgtggctga ggattttgaa atatagggga 1380 tttggaacct cccagataaa gacgccatcc gttgaatgag ctgcagtgat gcgttcccct 1440 gtgcgagaat ccatggttgt ggcagttgat acttaggtaa tagctgcatc cacactcaag 1500 gtccactcgt ttcctcctgt tgcgcctctt cgcttccctg tgttgaactt tgattggtac 1560 cggagtagag cggttgggtg agaaagacga atgttgcatt ttttaaagcc caggatttta 1620 atgctgagtt cttatcctcg tctaagaact ctttataact tgcattgggc cctggattgc 1680 agaggaagat tgttggtatt ccgcctttaa tttgaactgg cttcccgtac tttgtgttgg 1740 attgccagtc cctttgggcc cccatgaact ctttaaagtg tttgaggtag tgcggatcga 1800 cgtcatcaat gacgttatac catgcgtcgt tactgtacac ctttgggcta agatctaaat 1860 gcccacatag atagttgtgt gggcctaaag acctagccca catagtcttc ccagtacgac 1920 tatctccctc aattactata ctttgaggtc taaggggccg cgcagcggcg tcaacaacat 1980 tctccgacgc ccactcttca agttcttctg gaacttgatc gaaagaagaa gacgaaaaag 2040 gagaaacata aggagctggt ggctcctgaa agattctgtt taaatttgca tttaaattat 2100 gaaattgcag tacaaaatct ttaggagcca gttccttaat gactctaata gcctccgact 2160 tacttcccgc gttaagtgct gcggcgtaag cgtcattggc tgtctgttgc cctcctcttg 2220 ctgaccttcc gtcgatctga aattgtcccc agtcgagaat gtccccgtcc ttctcgatgt 2280 aggacttgac gtcggagctg gatttagctc cctgtatgtt tggtcggaaa tgtgctgacc 2340 agcttgggga gaccaagtcg aagaatcgca tattctggca cttgaatttc ccttcgaact 2400 ggatgagaac tcgcacgcga ggagtcccat cttcgtgaag ctctctgcag attctaatat 2460 atttttttga agttggggtt tggagattta ataattggga aagtgcttcc tctttggtga 2520 gagaacattt gggataagtg acgaaatagt ctttggaata aataccgtta cgccttggag 2580 gcatgttgac tagaattgat caccgattga ccgctcttgc aactctctcc tgtatatcgg 2640 tgatcaatat atagtgatca ccaaatggca taatggtaat aaaacaactt taatttgaaa 2700 ttcaaaaaaa aatttttgcg gccatccgct taatatt 2737 //