ID FJ028650; SV 2; linear; genomic RNA; STD; VRL; 3478 BP. XX AC FJ028650; XX DT 29-OCT-2009 (Rel. 102, Created) DT 24-MAR-2010 (Rel. 104, Last updated, Version 2) XX DE Broad bean stain virus segment RNA2, complete sequence. XX KW . XX OS Broad bean stain virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-3478 RA Chen H., Chen Q., Zhao W., Liao F., Chen H., Zhu S.; RT ; RL Submitted (15-AUG-2008) to the INSDC. RL Biosafety Lab, Xiamen Entry-Exit Inspection and Quarantine Bureau of RL People's Republic of China, No. 118, Dongdu Road, Xiamen, Fujian 361012, RL China XX RN [2] RC Sequence update by submitter RP 1-3478 RA Chen H., Huang Q., Zhao W., Liu B., Huang F., Zhu S., Chen H.; RT ; RL Submitted (19-MAR-2010) to the INSDC. RL Biosafety Lab, Xiamen Entry-Exit Inspection and Quarantine Bureau of RL People's Republic of China, No. 118, Dongdu Road, Xiamen, Fujian 361012, RL China XX DR MD5; 679d8771f916c11368390c3307f914e3. XX CC On Mar 22, 2010 this sequence version replaced gi:223037360. XX FH Key Location/Qualifiers FH FT source 1..3478 FT /organism="Broad bean stain virus" FT /segment="RNA2" FT /mol_type="genomic RNA" FT /note="LOEWE cat no. 07013PC" FT /db_xref="taxon:593572" FT CDS 269..3241 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:D0PSV7" FT /db_xref="InterPro:IPR003181" FT /db_xref="InterPro:IPR003182" FT /db_xref="InterPro:IPR029053" FT /db_xref="PDB:6QCC" FT /db_xref="UniProtKB/TrEMBL:D0PSV7" FT /protein_id="ACM79011.2" FT /translation="MFKGWIRNYKGGKYLCINAFTLKNRFQPDLYYFDFWAVDFHLCFI FT RLLCVFVAFLFAFVDFVIPYCIMAQEIIKQGIPANVLTEKAAQFKKAKSNEQLRDELPS FT ALALYHNHSLFDKLKRFGSKSTDISKLHAGKEIEYRHLDAGFLKASNHNVVDVPLLPST FT LIPVATDYNFTMSNGKRATALHVGAIEVIVQVFTSPDSDLMAGMMLVDTMHSRPENAIR FT SVYIVPLRSGPQMRALCFPNTLVPLNQNINKRFKMVFSLPNVDFPGGEDIAHVSVNVAG FT CTTGLQKSYIPSPLLTEEFNRENAHVIEYLGTHTYAMQMSNLPTQDSIANLQFDFRMGG FT KLELGHTSPSSAAFKRTKSLRYTIGGKASSDEEAPVAKSRSMHPAVDPRDDLVYANPQM FT DVDLFKLSLDDTSSVKGSLLDTRFAQVRVVIPKAMAGGNELLNNNLYDILVVGNNFRAA FT AALAHTHIIEGQIKCVCTINLPENTGCCLALCVNSSNRGQFSTDIYTIGSQDRMLWNPA FT CSKNSTFTFNPNPCSTGWSLEFLRRTKFHISVVCVSGWSAQPQTDLVMTMDFFVANVPC FT VPRIYNLGSPGQTLWLNRWMGKLSFGQGVSNDIKSMPLAIGGGAGAKDSILMNMTNAYL FT SLWRYFHGDLVFEVNKMSSPYIKSTVTFFIGFGGVSFEPELEDFPNKLVQFSEVQEKIE FT LKFTRAEFLTAWSTQVDPAAQLANDGCPYLYAMVHDSTASTIVGDFNLGVTLTRIENFA FT GIGCNPGIQGARLLGSAIATPQNAVIRSSPGIYSNCFSLRAPLKPDGLKSFTCDLMGGG FT VVTDGDTGWQVTVRNTPVSNLLRTAAWKRGTVHVQVVLAGASVKRSDWDSTVQIFLRQS FT MATSSYDAKIWDICQPGAAMLEFSFDVVGPNSGFEMWDSNWASQTSWFLEFLISNPAQN FT TLFEVNLRLDENFSVAGTTLMPPFVLDRVSVARPLLGKQTKTIARSARVVRETKEASES FT P" FT mat_peptide 269..1462 FT /product="P2AB polyprotein" FT mat_peptide 1463..2554 FT /product="large coat protein" FT mat_peptide 2555..3238 FT /product="small coat protein" FT 3'UTR 3242..3478 XX SQ Sequence 3478 BP; 906 A; 681 C; 789 G; 1102 T; 0 other; cggcctggcc ctattaaaat tttgatagaa ttttgataaa agcaaacgtg gagaaatcca 60 aaccagttac tttcaagtga acgtgtgtga atgctatttt tcgaattcat ctcctgtcaa 120 cacttgtctc cttttcactc aaggttttat aaactttgta gaagtcactg cggtgtgagt 180 ccgcccactt atttaagtgc gacttccgag ccattaatta cctattttac ctgtttccat 240 gcttgaacat tgccgtatta attaaattat gttcaaaggt tggatccgga attataaagg 300 ggggaaatat ttgtgtatca acgcatttac attgaagaat agatttcagc ctgatttata 360 ttatttcgat ttctgggccg ttgattttca tttgtgcttc attcgtttgc tctgtgtttt 420 tgtagctttt ctgttcgctt ttgtagactt tgtgataccc tattgcatca tggcacaaga 480 aattattaaa caaggcatac cagcaaatgt cctcactgag aaggcagcac agttcaagaa 540 agctaagagc aacgagcagc tgcgtgatga attgccaagt gctttggcgc tctatcataa 600 ccactccttg tttgacaaac ttaagcgttt tgggagtaag tctacagaca tctcaaagtt 660 gcatgcaggg aaagaaattg aatataggca cctggatgct ggtttcttga aagctagtaa 720 tcacaatgtt gttgatgttc ctttgctccc ttcaactctt attccagtgg cgactgacta 780 taatttcaca atgagtaatg ggaagcgagc cactgccctt cacgtaggtg ctattgaggt 840 aatagtgcaa gtctttactt ctccagatag tgatctaatg gctgggatga tgttagtaga 900 cacgatgcat tctcgtccag aaaatgccat taggtctgtt tacatagttc ctttgcgcag 960 tggacctcag atgcgtgctc tatgtttccc aaatacactt gttcctctga accaaaatat 1020 caataagaga tttaagatgg tcttttcact gccaaatgtt gattttcctg gaggggaaga 1080 tattgctcat gtttctgtga atgtagctgg ttgcacaact ggactgcaga aatcctatat 1140 cccttccccc ttgctgacag aagagtttaa ccgagagaat gctcatgtta ttgagtactt 1200 gggcacacac acatatgcta tgcaaatgag taacctgccc actcaggact ccattgccaa 1260 tttgcagttt gattttcgca tgggtggcaa gttggaactt gggcatacaa gtccaagtag 1320 tgcagcattc aagcgcacta agagtttgcg atacactatt gggggaaaag cttcaagtga 1380 tgaggaagca ccggtagcta aatcgagaag catgcatcct gcagtcgacc ccagggatga 1440 tttggtctac gccaatccac agatggacgt agatctcttc aagctgagtt tggatgacac 1500 aagtagtgtt aagggttctt tgttggatac taggtttgcc caagtgagag ttgtgatacc 1560 taaggcaatg gcgggtggaa atgaattact gaacaataat ttgtacgaca ttttagttgt 1620 gggtaataat tttcgagctg ctgctgcgtt agcacacacc cacatcattg aaggacaaat 1680 taagtgtgtt tgcaccataa atttgcctga aaatactggt tgctgcttgg ctttgtgcgt 1740 gaatagtagt aacaggggac agttcagtac tgatatttat accattggtt ctcaagatag 1800 aatgttatgg aatccagcat gttcaaagaa tagcacattc acttttaatc ccaacccttg 1860 tagcacgggt tggagtctgg agttcttgcg ccgcaccaaa tttcatataa gtgtggtttg 1920 tgtctcaggc tggtctgcac agccacaaac tgatctcgtt atgacaatgg atttctttgt 1980 ggctaatgtg ccatgtgtcc cccgcatcta caatttaggg tcaccaggtc aaaccttgtg 2040 gctcaatagg tggatgggga agctgtcctt tgggcagggt gttagcaatg atattaaatc 2100 catgccctta gccatagggg gaggtgcagg tgctaaggat tccattttga tgaatatgac 2160 aaatgcttat ttgtccttgt ggcgttactt tcatggggac ctggtttttg aagttaacaa 2220 aatgagctct ccctacatta aatcaacagt gactttcttc ataggatttg gtggggttag 2280 ctttgaacct gaactagagg attttcccaa caaacttgtt cagtttagcg aagtgcaaga 2340 gaaaattgag ttgaaattca caagggctga gttcttaaca gcttggtcca cacaggttga 2400 tcctgcagcc cagcttgcca atgatggttg cccttatcta tatgcaatgg tgcatgactc 2460 aaccgctagt acaatagttg gtgattttaa tcttggtgtc accttaacta gaatcgaaaa 2520 ttttgcgggt attgggtgta atccaggaat acaaggagct agacttcttg gcagtgccat 2580 tgcaacgccc cagaatgcag taatacgttc ttcccctggc atatatagca actgttttag 2640 tttgcgggct cccctaaagc ctgacggtct aaaatctttt acatgtgatc tgatgggagg 2700 aggcgtagta acggatggtg acactgggtg gcaagtcaca gttcgcaata cgcctgtgtc 2760 taatttgttg cgcacagcgg cttggaagcg aggtactgta catgtgcaag tggtcctggc 2820 aggtgctagt gtcaaaagaa gtgactggga ctcaacagtg caaatatttc tccgtcaatc 2880 tatggctact agtagctatg atgccaaaat atgggacatc tgtcaaccag gtgctgctat 2940 gctagaattt tcattcgatg tggtgggtcc caacagtggt tttgaaatgt gggattccaa 3000 ctgggcttcc cagacaagct ggtttttgga attcttaatt tctaatcctg cacagaatac 3060 tttgtttgaa gtcaacttgc gccttgatga aaatttcagt gtggcaggca ctactttaat 3120 gcctccattt gtcttggaca gagtttcagt tgctaggcct ttattgggta agcaaactaa 3180 aacgatagct agaagtgcga gagtagttcg tgaaaccaaa gaggcgtcag aatcaccatg 3240 atctcttcat ttctatgttc tttcttttgt tcccattgtc ttgttgtctt ttcctgtgtg 3300 gctcctgttt agcaggtcga accttcagca agttcacaaa aatagagtcg ttcttttgtg 3360 tctttcttta atttccttct tcctcttctt tccagtttta tttgtgcttg caatgtaata 3420 actagattta tttaatgata atattgctct cttgtgggtg tttaaatcta gtgtttat 3478 //