ID   FJ024083; SV 1; linear; genomic RNA; STD; VRL; 1759 BP.
XX
AC   FJ024083;
XX
DT   17-SEP-2008 (Rel. 97, Created)
DT   17-SEP-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Narcissus latent virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Narcissus latent virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1759
RA   Monger W.A., Nixon T.P.;
RT   "Viruses found in UK Narcissus";
RL   Unpublished.
XX
RN   [2]
RP   1-1759
RA   Monger W.A., Nixon T.P.;
RT   ;
RL   Submitted (14-AUG-2008) to the INSDC.
RL   Plant Health, Central Science Laboratory, Sand Hutton, York YO41 1LZ, UK
XX
DR   MD5; 7d5705a8b20cfc0268541c3a71d6938f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1759
FT                   /organism="Narcissus latent virus"
FT                   /host="Narcissus cultivar Missouri"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /isolation_source="leaves"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:48200"
FT   CDS             <1..1531
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:B5TVM0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:B5TVM0"
FT                   /protein_id="ACH88050.1"
FT                   /translation="STVVDNTLVLMLSFYYAYARKTNDLTFDRIDEDFCFVCNGDDNKF
FT                   SLSPDFVAKHGGSFENEINELGLTYEFDDLTPDIMKNPYMSLTIVQVGERIGFQLNPER
FT                   IVGIVQWIKKGGVLHAAQAAFAAMVEAFNDPSLFTVMHPYLVWLLVTYKDVLLYAQEND
FT                   LGSVCYMDPCQVFALHYGSSEGLESVDFESDNESANDADDDVTPSLELQMDVESLIPEK
FT                   GKNAKNTNKDEQSKRTDATAQGESSSPLKSSTEEAANRGDTNPPQGDPLVDDEIVEWVI
FT                   PKMSSNIVTSPVPVVNGKKLWKRGILKNMPKIMFSTTSTMATRVQLTSWVEEVKKSLAL
FT                   KTDDAWTVVITNWCIWCANNGTSSEIDTSQNMEICDSFGKVQEVPIEIFVNPAVENGGL
FT                   RKIMRHFYGITYEILKVGKQMTAWGNKRGFTEKSMIPYAFDYYVVTNTTPKTVREQLAQ
FT                   SKAAAIGSGTVRKMILDGNIQGSHASYERHVDTDNSEYEHGSSVDQRPYLT"
FT   mat_peptide     <1..637
FT                   /product="NIb"
FT   mat_peptide     638..1528
FT                   /product="coat protein"
FT   3'UTR           1532..>1759
XX
SQ   Sequence 1759 BP; 511 A; 351 C; 418 G; 479 T; 0 other;
     tagcactgtt gtcgacaaca ccttggtgtt aatgctttcc ttttattatg catatgcaag        60
     gaaaactaat gatttgactt tcgaccgcat tgatgaagat ttctgcttcg tttgcaatgg       120
     tgatgacaac aaattttcgc tttcgcccga ttttgttgcc aaacacggtg gttcgtttga       180
     aaatgagata aacgagctcg gtctcactta tgaatttgat gatctcacgc cagacataat       240
     gaagaaccca tacatgagcc tgacgatagt tcaggtgggt gagcgcattg gcttccagct       300
     caaccctgaa cgaattgttg gcattgtaca gtggatcaag aaagggggcg ttctgcatgc       360
     agcccaagca gcatttgcag ccatggtaga agcattcaat gatccaagtc tattcactgt       420
     tatgcaccca tatttggtgt ggctcttagt cacttataag gatgttttgt tgtacgctca       480
     agagaacgac ttgggatcag tttgttacat ggacccatgt caggtgttcg cactacacta       540
     tgggtcatct gaaggtttgg agagcgtgga tttcgagagt gacaacgaga gtgcaaatga       600
     tgctgatgat gacgtcacgc ccagcttgga actccagatg gatgtcgaga gtctgattcc       660
     tgagaaaggg aaaaacgcta agaacacgaa caaagacgaa caaagcaagc gaactgatgc       720
     gactgctcaa ggcgagtcaa gtagccctct caagagcagc acagaggagg ccgccaaccg       780
     aggtgacaca aatccaccac aaggagatcc tttagttgat gatgagatag tcgaatgggt       840
     cattccaaaa atgagttcaa acattgtgac ctcaccagtg ccagttgtca atggcaagaa       900
     actgtggaag cgaggaatcc tgaaaaacat gccgaaaata atgttcagca caacttcaac       960
     catggcaact cgagttcaac taacatcatg ggttgaggaa gttaagaaat cactcgccct      1020
     caaaacagat gatgcgtgga cggttgtaat cacaaattgg tgcatttggt gcgctaacaa      1080
     tggcacctca tctgaaattg acacatcaca gaatatggaa atttgtgata gttttggaaa      1140
     agttcaagaa gtccccatcg aaatttttgt taatccagct gttgagaatg gtgggctacg      1200
     gaaaatcatg aggcattttt atggcataac atatgaaatt ttgaaggttg gtaagcaaat      1260
     gacagcctgg gggaacaaga ggggttttac tgagaaatcg atgatcccct acgcttttga      1320
     ctactatgtc gtcacaaaca caacaccgaa gactgtgcgt gagcaattgg ctcaatcgaa      1380
     agcagcagca attggctcag gcacggtgag aaagatgatt cttgatggaa acatacaagg      1440
     gtcacacgct agttatgaac gacatgtcga cacggacaat agcgaatatg agcatggttc      1500
     cagtgttgac cagaggccct atcttactta agttctgcgt tcttgaacgt ttgaacttaa      1560
     taatttatat ttgcattata tgagttttct ttgaagctta ttttctctct tttctctttg      1620
     agctttaagg gttaaatggg ggtttgtttg ccattgttcc tccaatgccc cgaaatggca      1680
     agctcattct agcgatgttt atctttaaag agttttaatc gctttcacct aagcctgatc      1740
     tggatggtcg gctgcgctt                                                   1759
//