ID FJ012359; SV 1; linear; genomic DNA; STD; VRL; 2211 BP. XX AC FJ012359; XX DT 26-JAN-2009 (Rel. 99, Created) DT 26-JAN-2009 (Rel. 99, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate Sinaloa segment DNA-A capsid protein DE (V1) gene, partial cds; and pre-coat protein (V2), C4 protein (C4), C2 DE protein (C2), and C3 protein (C3) genes, complete cds. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2211 RA Gamez-Jimenez C., Leyva-Lopez N.E., Santos-Cervantes M.E., RA Mendez-lozano J.; RT "Tomatillo (Physalis ixocarpa) as a natural new host for Tomato yellow leaf RT curl virus in Sinaloa, Mexico"; RL Unpublished. XX RN [2] RP 1-2211 RA Gamez-Jimenez C., Leyva-Lopez N.E., Santos-Cervantes M.E., RA Mendez-lozano J.; RT ; RL Submitted (11-AUG-2008) to the INSDC. RL Agropecuario, CIIDIR-IPN Unidad Sinaloa, Blvd. Juan de Dios Batiz #250, RL Guasave, Sin 81101, Mexico XX DR MD5; 32c135e9795e9fa99e229103cdf5eda2. XX FH Key Location/Qualifiers FH FT source 1..2211 FT /organism="Tomato yellow leaf curl virus" FT /segment="DNA-A" FT /host="tomatillo" FT /isolate="Sinaloa" FT /mol_type="genomic DNA" FT /country="Mexico:Sinaloa" FT /collected_by="J. Mendez" FT /collection_date="2006" FT /db_xref="taxon:10832" FT gene complement(<1..203) FT /gene="V1" FT CDS complement(<1..203) FT /codon_start=1 FT /gene="V1" FT /product="capsid protein" FT /db_xref="GOA:B9USF5" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B9USF5" FT /protein_id="ACL80646.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRG" FT gene complement(13..363) FT /gene="V2" FT CDS complement(13..363) FT /codon_start=1 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:Q2EI17" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2EI17" FT /protein_id="ACL80645.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 828..1121 FT /gene="C4" FT CDS 828..1121 FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B9USF7" FT /protein_id="ACL80649.1" FT /translation="MGNHISMCLSNSKANTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSTADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" FT gene 1659..2066 FT /gene="C2" FT CDS 1659..2066 FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:A5A3G5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:A5A3G5" FT /protein_id="ACL80648.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene 1807..2211 FT /gene="C3" FT CDS 1807..2211 FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q00GE0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q00GE0" FT /protein_id="ACL80647.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" XX SQ Sequence 2211 BP; 709 A; 479 C; 443 G; 580 T; 0 other; ccacgaggaa catcagggct tcgatacatt ctgtatattc tgggcttccg gtacatgggc 60 ctgtacgtcc atgatcgtcg cttgtttgtg ccttggacaa tggggacagc agcacggctg 120 ctgtatgggc tgtcgaagtt cagccttcgg cgaaccttcg agacgggcgt ggaaatgatt 180 atatcgcctg gtcgcttcga catagtcacg ggcccttaca acagatataa gatccctaat 240 taaatcgtgg cccaatgtat tgggctcgta agtttcctca acggactgca aatatttaat 300 agctaacata caacgaaatc cgtgaacaga ttcaggaaat tcatttagaa gtggatccca 360 catagtgcaa gacaaactac ttggggacca agtatataaa gacaaatgaa cacttatcta 420 acgtttgagg atgcaatttg attggttgac agtgacgtct gtggaaccct cgtggggacc 480 acataaaaag aaaaggcgcg gccatccggt aatattatac ggatggccgc tttaatgatt 540 tgatttttga attttgaatt ttgaattgca atgtactttt acaaaattac caaatagcca 600 tttggtgtcc aggtataagt aagacaccga tacaccgatt gccatagagc tttgagggac 660 accaattcat ttcaacatgc ctcgtttatt taaaatatat gccaaaaatt atttcctaac 720 atatcccaat tgttctctct ctaaagagga agcactttcc caattaaaaa acctagaaac 780 cccaacaaat aaaaaataca tcaaagtttg cagagaactc cacgagaatg gggaaccaca 840 tctccatgtg cttatccaat tcgaaggcaa ataccaatgt aagaaccaac ggttcttcga 900 cctggtatcc ccaaacaggt cagcacattt ccatccgaac attcaggcag ctaagagctc 960 aacagatgtc aagacctacg tggagaaaga cggagacttc attgattttg gagttttcca 1020 aatcgacggc agatcagcta gaggaggtca gcaatctgcc aacgacgcat atgccgaggc 1080 actcaattca ggcagtaaat ccgaggccct caatatatta aaagagaagg ccccaaagga 1140 ctatatttta caatttcata atttaagttc aaatttagat aggattttta gtcctccttt 1200 agaagtttat gtttctccat ttctttcttc ttcttttaat caagttccag atgaacttga 1260 agagtgggtc gccgagaacg tcgtatcttc cgctgcgcgg ccatggagac ccataagtat 1320 tgtcattgag ggtgatagca gaacaggcaa aacaatgtgg gccaggtctc taggcccaca 1380 taattattta tgtggacatc tagacctaag cccaaaggtg tacaataatg atgcgtggta 1440 caacgtcatt gatgacgtag acccgcatta tttaaagcac ttcaaggaat tcatgggggc 1500 ccagagggac tggcaaagca acacaaagta cgggaagccc attcaaatta aagggggaat 1560 tcccactatc ttcctctgca atccaggacc tacctcctca tatagggaat atctagacga 1620 agaaaaaaac atatccttga aaaattgggc tctcaagaat gcaaccttcg tcaccctcta 1680 cgagccactg ttcgcaagta tcaatcaagg tccaacacaa gatagccaag aagaaaccaa 1740 taaggcgtaa gcgtgtagac ctagactgtg gctgctcata ctacctccac atcaactgca 1800 acaatcatgg attcacgcac aggggaactc atcactgctc ctcaagcaga gaatggcgtt 1860 tttatctggg agataaacaa tcccctctat ttcaagataa cagaacacag ccagaggcca 1920 tttctaatga accacgacat catttccatt cagataagat tcaaccacaa catcaggaag 1980 gtattgggga ttcacaaatg ttttctcaac ttccgaattt ggacgacatt acagcctcag 2040 actggtcgtt tcttaagagt atttagatat caagttctta agtatttaga tagtcttggt 2100 gtaatttcaa ttaacaatgt aatcagagca gttgatcatg tattgtatga tgtacttgaa 2160 aacacaataa atgtaacaga aactcatgat ataaaatata aattttatta a 2211 //